RNA–Protein interactions for RNA: YIR039C

YPS6, Transcript of Putative GPI-anchored aspartic protease, yeast

Gene YPS6, Length 1,614 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPS6	YIR039C	GCR1	P07261	785 aa		4.22	□□□□□ -1.73
YPS6	YIR039C	RAD4	P14736	754 aa		4.22	□□□□□ -1.73
YPS6	YIR039C	PYC2	P32327	1180 aa	Known RBP	4.22	□□□□□ -1.73
YPS6	YIR039C	YKL069W	P36088	180 aa		4.22	□□□□□ -1.73
YPS6	YIR039C	PAF1	P38351	445 aa		4.22	□□□□□ -1.73
YPS6	YIR039C	SAP155	P43612	1002 aa		4.22	□□□□□ -1.73
YPS6	YIR039C	GNP1	P48813	663 aa		4.22	□□□□□ -1.73
YPS6	YIR039C	YLR122C	Q12312	125 aa		4.22	□□□□□ -1.73
YPS6	YIR039C	DRS2	P39524	1355 aa		4.22	□□□□□ -1.73
YPS6	YIR039C	TOS1	P38288	455 aa		4.21	□□□□□ -1.73
YPS6	YIR039C	RVS167	P39743	482 aa	Known RBP	4.21	□□□□□ -1.73
YPS6	YIR039C	EEB1	Q02891	456 aa		4.21	□□□□□ -1.73
YPS6	YIR039C	AOS1	Q06624	347 aa		4.21	□□□□□ -1.73
YPS6	YIR039C	DOP1	Q03921	1698 aa		4.21	□□□□□ -1.74
YPS6	YIR039C	FUS1	P11710	512 aa		4.21	□□□□□ -1.74
YPS6	YIR039C	YHR020W	P38708	688 aa	Known RBP	4.21	□□□□□ -1.74
YPS6	YIR039C	NUP82	P40368	713 aa		4.21	□□□□□ -1.74
YPS6	YIR039C	TIM54	P47045	478 aa		4.21	□□□□□ -1.74
YPS6	YIR039C	SOK2	P53438	785 aa	Predicted RBP	4.21	□□□□□ -1.74
YPS6	YIR039C	POB3	Q04636	552 aa	Known RBP	4.21	□□□□□ -1.74
YPS6	YIR039C	PMT7	Q06644	662 aa		4.21	□□□□□ -1.74
YPS6	YIR039C	FAL1	Q12099	399 aa	Known RBP	4.21	□□□□□ -1.74
YPS6	YIR039C	YOR093C	Q12275	1648 aa		4.2	□□□□□ -1.74
YPS6	YIR039C	CHC1	P22137	1653 aa	Known RBP	4.2	□□□□□ -1.74
YPS6	YIR039C	RIM11	P38615	370 aa		4.2	□□□□□ -1.74
YPS6	YIR039C	GIP2	P40036	548 aa		4.2	□□□□□ -1.74
YPS6	YIR039C	XKS1	P42826	600 aa		4.2	□□□□□ -1.74
YPS6	YIR039C	TYW3	P53177	273 aa		4.2	□□□□□ -1.74
YPS6	YIR039C	BIO5	P53744	561 aa	Known RBP	4.2	□□□□□ -1.74
YPS6	YIR039C	TMA46	Q12000	345 aa	Known RBP	4.2	□□□□□ -1.74
YPS6	YIR039C	PDR11	P40550	1411 aa		4.19	□□□□□ -1.74
YPS6	YIR039C	SEC23	P15303	768 aa	Known RBP	4.19	□□□□□ -1.74
YPS6	YIR039C	RSC6	P25632	483 aa		4.19	□□□□□ -1.74
YPS6	YIR039C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
YPS6	YIR039C	TIM23	P32897	222 aa		4.19	□□□□□ -1.74
YPS6	YIR039C	CTH1	P47976	325 aa		4.19	□□□□□ -1.74
YPS6	YIR039C	MRL1	Q06815	381 aa		4.19	□□□□□ -1.74
YPS6	YIR039C	SLP1	Q12232	587 aa		4.19	□□□□□ -1.74
YPS6	YIR039C	SPT7	P35177	1332 aa		4.18	□□□□□ -1.74
YPS6	YIR039C	MET6	P05694	767 aa	Known RBP	4.18	□□□□□ -1.74
YPS6	YIR039C	BAS1	P22035	811 aa		4.18	□□□□□ -1.74
YPS6	YIR039C	ELM1	P32801	640 aa		4.18	□□□□□ -1.74
YPS6	YIR039C	SQT1	P35184	431 aa		4.18	□□□□□ -1.74
YPS6	YIR039C	MNN1	P39106	762 aa		4.18	□□□□□ -1.74
YPS6	YIR039C	RSM26	P47141	266 aa		4.18	□□□□□ -1.74
YPS6	YIR039C	GUP1	P53154	560 aa		4.18	□□□□□ -1.74
YPS6	YIR039C	CMR1	Q12510	522 aa	Known RBP	4.18	□□□□□ -1.74
YPS6	YIR039C	VMR1	P38735	1592 aa		4.18	□□□□□ -1.74
YPS6	YIR039C	PDR5	P33302	1511 aa	Known RBP	4.18	□□□□□ -1.74
YPS6	YIR039C	TAF13	P11747	167 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	PRP5	P21372	849 aa	Predicted RBP	4.17	□□□□□ -1.74
YPS6	YIR039C	TSR4	P25040	408 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	STE5	P32917	917 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	TAF5	P38129	798 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	SAF1	P38352	637 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	PEX28	P38848	579 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	NEO1	P40527	1151 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	YJR124C	P47159	448 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	YGL140C	P53120	1219 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	YNR065C	P53751	1116 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	NOG1	Q02892	647 aa	Known RBP	4.17	□□□□□ -1.74
YPS6	YIR039C	BRE4	Q07660	1125 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	FLC1	Q08967	793 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	BNI1	P41832	1953 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	TRM3	Q07527	1436 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	PHO8	P11491	566 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	CHS2	P14180	963 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	RAD27	P26793	382 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	HXT13	P39924	564 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	CHZ1	P40019	153 aa	Predicted RBP	4.17	□□□□□ -1.74
YPS6	YIR039C	TED1	P40533	473 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	LEM3	P42838	414 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	ATG36	P46983	293 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	YJR142W	P47173	342 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	YGR130C	P53278	816 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	HXT17	P53631	564 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	HXT15	P54854	567 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
YPS6	YIR039C	HDA2	Q06629	674 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	SOG2	Q08817	791 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	YLR125W	Q12138	136 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	GLO4	Q12320	285 aa		4.17	□□□□□ -1.74
YPS6	YIR039C	TY4B-P	A0A0B7P3V8	1104 aa		4.16	□□□□□ -1.74
YPS6	YIR039C	TRP2	P00899	507 aa	Known RBP	4.16	□□□□□ -1.74
YPS6	YIR039C	HEM13	P11353	328 aa	Known RBP	4.16	□□□□□ -1.74
YPS6	YIR039C	NPR1	P22211	790 aa		4.16	□□□□□ -1.74
YPS6	YIR039C	AGP1	P25376	633 aa		4.16	□□□□□ -1.74
YPS6	YIR039C	TFA2	P36145	328 aa		4.16	□□□□□ -1.74
YPS6	YIR039C	TYS1	P36421	394 aa	Known RBP	4.16	□□□□□ -1.74
YPS6	YIR039C	RSP5	P39940	809 aa	Known RBP	4.16	□□□□□ -1.74
YPS6	YIR039C	ENT3	P47160	408 aa		4.16	□□□□□ -1.74
YPS6	YIR039C	UBX5	Q06682	500 aa		4.16	□□□□□ -1.74
YPS6	YIR039C	YGR161W-C	Q3E744	92 aa		4.16	□□□□□ -1.74
YPS6	YIR039C	TY4A-H	Q6Q5P6	413 aa		4.16	□□□□□ -1.74
YPS6	YIR039C	NUP188	P52593	1655 aa	Known RBP	4.16	□□□□□ -1.74
YPS6	YIR039C	RAV1	P47104	1357 aa		4.15	□□□□□ -1.74
YPS6	YIR039C	IML1	P47170	1584 aa		4.15	□□□□□ -1.74
YPS6	YIR039C	RTC1	Q08281	1341 aa		4.15	□□□□□ -1.74
YPS6	YIR039C	LYP1	P32487	611 aa		4.15	□□□□□ -1.74
YPS6	YIR039C	RDH54	P38086	958 aa		4.15	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 98.2 ms