RNA–Protein interactions for RNA: YIL132C

CSM2, Transcript of Component of Shu complex (aka PCSS complex), yeast

Gene CSM2, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSM2	YIL132C	SSF2	Q12153	453 aa	Predicted RBP	10.22	□□□□□ -0.77
CSM2	YIL132C	YHL012W	P38709	493 aa		10.21	□□□□□ -0.77
CSM2	YIL132C	TRE1	Q08919	783 aa		10.21	□□□□□ -0.77
CSM2	YIL132C	YER152C	P10356	443 aa		10.2	□□□□□ -0.78
CSM2	YIL132C	AGP1	P25376	633 aa		10.2	□□□□□ -0.78
CSM2	YIL132C	ABD1	P32783	436 aa	Predicted RBP	10.2	□□□□□ -0.78
CSM2	YIL132C	YKL069W	P36088	180 aa		10.2	□□□□□ -0.78
CSM2	YIL132C	YKR073C	P36153	106 aa		10.2	□□□□□ -0.78
CSM2	YIL132C	SEA4	P38164	1038 aa		10.2	□□□□□ -0.78
CSM2	YIL132C	RPN3	P40016	523 aa	Known RBP	10.2	□□□□□ -0.78
CSM2	YIL132C	HOS3	Q02959	697 aa	Known RBP	10.2	□□□□□ -0.78
CSM2	YIL132C	ESC2	Q06340	456 aa		10.2	□□□□□ -0.78
CSM2	YIL132C	GNT1	Q12096	491 aa		10.2	□□□□□ -0.78
CSM2	YIL132C	GCD1	P09032	578 aa	Predicted RBP	10.19	□□□□□ -0.78
CSM2	YIL132C	SAM35	P14693	329 aa		10.19	□□□□□ -0.78
CSM2	YIL132C	YGL176C	P46945	554 aa		10.19	□□□□□ -0.78
CSM2	YIL132C	YPL066W	Q12194	479 aa		10.19	□□□□□ -0.78
CSM2	YIL132C	SBA1	P28707	216 aa	Known RBP	10.18	□□□□□ -0.78
CSM2	YIL132C	YKL107W	P34251	309 aa		10.18	□□□□□ -0.78
CSM2	YIL132C	PEX7	P39108	375 aa		10.18	□□□□□ -0.78
CSM2	YIL132C	TNA1	P53322	534 aa		10.18	□□□□□ -0.78
CSM2	YIL132C	ALO1	P54783	526 aa	Known RBP	10.18	□□□□□ -0.78
CSM2	YIL132C	TOS1	P38288	455 aa		10.17	□□□□□ -0.78
CSM2	YIL132C	TDA5	Q06417	326 aa	Known RBP	10.17	□□□□□ -0.78
CSM2	YIL132C	COQ4	O13525	335 aa		10.16	□□□□□ -0.78
CSM2	YIL132C	SRO9	P25567	434 aa	Known RBP	10.16	□□□□□ -0.78
CSM2	YIL132C	MDL2	P33311	773 aa		10.16	□□□□□ -0.78
CSM2	YIL132C	SNF7	P39929	240 aa	Known RBP	10.16	□□□□□ -0.78
CSM2	YIL132C	SPF1	P39986	1215 aa	Known RBP	10.16	□□□□□ -0.78
CSM2	YIL132C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	10.15	□□□□□ -0.78	not detected
CSM2	YIL132C	PRO1	P32264	428 aa		10.14	□□□□□ -0.79
CSM2	YIL132C	BAP2	P38084	609 aa		10.14	□□□□□ -0.79
CSM2	YIL132C	NNF1	P47149	201 aa		10.14	□□□□□ -0.79
CSM2	YIL132C	SHE9	Q04172	456 aa		10.14	□□□□□ -0.79
CSM2	YIL132C	SPP382	Q06411	708 aa	Predicted RBP	10.14	□□□□□ -0.79
CSM2	YIL132C	SNF5	P18480	905 aa		10.13	□□□□□ -0.79
CSM2	YIL132C	GRX1	P25373	110 aa	Known RBP	10.13	□□□□□ -0.79
CSM2	YIL132C	SSY1	Q03770	852 aa		10.13	□□□□□ -0.79
CSM2	YIL132C	RCL1	Q08096	367 aa	Predicted RBP	10.13	□□□□□ -0.79
CSM2	YIL132C	VBA5	P36172	582 aa		10.12	□□□□□ -0.79
CSM2	YIL132C	PTC7	P38797	343 aa		10.12	□□□□□ -0.79
CSM2	YIL132C	SDH1	Q00711	640 aa		10.12	□□□□□ -0.79
CSM2	YIL132C	RPL11A	P0C0W9	174 aa	Known RBP	10.11	□□□□□ -0.79
CSM2	YIL132C	ADP1	P25371	1049 aa		10.11	□□□□□ -0.79
CSM2	YIL132C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	10.11	□□□□□ -0.79	not detected
CSM2	YIL132C	OMA1	P36163	345 aa		10.11	□□□□□ -0.79
CSM2	YIL132C	CCZ1	P38273	704 aa		10.11	□□□□□ -0.79
CSM2	YIL132C	RPL11B	Q3E757	174 aa	Predicted RBP	10.11	□□□□□ -0.79
CSM2	YIL132C	PNT1	P38969	423 aa		10.1	□□□□□ -0.79
CSM2	YIL132C	PIK1	P39104	1066 aa		10.1	□□□□□ -0.79
CSM2	YIL132C	SIP5	P40210	489 aa	Known RBP	10.1	□□□□□ -0.79
CSM2	YIL132C	GTS1	P40956	396 aa		10.1	□□□□□ -0.79
CSM2	YIL132C	MXR1	P40029	184 aa		10.09	□□□□□ -0.79
CSM2	YIL132C	YFL054C	P43549	646 aa		10.09	□□□□□ -0.79
CSM2	YIL132C	INP52	P50942	1183 aa		10.09	□□□□□ -0.79
CSM2	YIL132C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	10.09	□□□□□ -0.79	not detected
CSM2	YIL132C	RSC58	Q07979	502 aa		10.09	□□□□□ -0.79
CSM2	YIL132C	NBA1	Q08229	501 aa	Known RBP	10.09	□□□□□ -0.79
CSM2	YIL132C	DBP2	P24783	546 aa	Known RBP	10.08	□□□□□ -0.8
CSM2	YIL132C	MRP8	P35719	219 aa		10.08	□□□□□ -0.8
CSM2	YIL132C	YJL049W	P47048	450 aa		10.08	□□□□□ -0.8
CSM2	YIL132C	BRE4	Q07660	1125 aa		10.08	□□□□□ -0.8
CSM2	YIL132C	LIP5	P32875	414 aa		10.07	□□□□□ -0.8
CSM2	YIL132C	MBP1	P39678	833 aa		10.07	□□□□□ -0.8
CSM2	YIL132C	CTH1	P47976	325 aa		10.07	□□□□□ -0.8
CSM2	YIL132C	TAT2	P38967	592 aa		10.06	□□□□□ -0.8
CSM2	YIL132C	NAN1	Q02931	896 aa	Known RBP	10.06	□□□□□ -0.8
CSM2	YIL132C	RSB1	Q08417	382 aa		10.06	□□□□□ -0.8
CSM2	YIL132C	AIM26	P32858	118 aa		10.05	□□□□□ -0.8
CSM2	YIL132C	STE5	P32917	917 aa		10.05	□□□□□ -0.8
CSM2	YIL132C	GEM1	P39722	662 aa		10.05	□□□□□ -0.8
CSM2	YIL132C	ACM1	Q08981	209 aa		10.05	□□□□□ -0.8
CSM2	YIL132C	PBY1	P38254	753 aa		10.04	□□□□□ -0.8
CSM2	YIL132C	IRR1	P40541	1150 aa		10.04	□□□□□ -0.8
CSM2	YIL132C	MAC1	P35192	417 aa		10.03	□□□□□ -0.8
CSM2	YIL132C	YBR184W	P38299	523 aa		10.03	□□□□□ -0.8
CSM2	YIL132C	OCA5	P38738	679 aa		10.03	□□□□□ -0.8
CSM2	YIL132C	LPX1	Q12405	387 aa	Known RBP	10.03	□□□□□ -0.8
CSM2	YIL132C	UGA2	P38067	497 aa		10.02	□□□□□ -0.81
CSM2	YIL132C	RAD4	P14736	754 aa		10.01	□□□□□ -0.81
CSM2	YIL132C	SLA2	P33338	968 aa		10.01	□□□□□ -0.81
CSM2	YIL132C	ORC3	P54790	616 aa		10.01	□□□□□ -0.81
CSM2	YIL132C	GLT1	Q12680	2145 aa	Known RBP	10	□□□□□ -0.81
CSM2	YIL132C	HSP78	P33416	811 aa		10	□□□□□ -0.81
CSM2	YIL132C	SPS1	P08458	490 aa		9.99	□□□□□ -0.81
CSM2	YIL132C	YOL098C	Q12496	1037 aa		9.99	□□□□□ -0.81
CSM2	YIL132C	THS1	P04801	734 aa	Known RBP	9.98	□□□□□ -0.81
CSM2	YIL132C	SPO75	Q07798	868 aa		9.98	□□□□□ -0.81
CSM2	YIL132C	FOL2	P51601	243 aa	Known RBP	9.97	□□□□□ -0.81
CSM2	YIL132C	FMP25	Q08023	583 aa		9.97	□□□□□ -0.81
CSM2	YIL132C	BI4	P03879	638 aa		9.96	□□□□□ -0.82
CSM2	YIL132C	SEC26	P41810	973 aa	Known RBP	9.96	□□□□□ -0.82
CSM2	YIL132C	ATG13	Q06628	738 aa		9.96	□□□□□ -0.82
CSM2	YIL132C	PFD1	P46988	109 aa		9.95	□□□□□ -0.82
CSM2	YIL132C	TIM54	P47045	478 aa		9.95	□□□□□ -0.82
CSM2	YIL132C	RPL8B	P29453	256 aa	Known RBP	9.94	□□□□□ -0.82
CSM2	YIL132C	IOC3	P43596	787 aa		9.94	□□□□□ -0.82
CSM2	YIL132C	NSE3	Q05541	303 aa		9.94	□□□□□ -0.82
CSM2	YIL132C	SVS1	Q12254	260 aa		9.94	□□□□□ -0.82
CSM2	YIL132C	PRP9	P19736	530 aa	Known RBP	9.93	□□□□□ -0.82

Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms