RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W GAA1P39012 614 aa15.48■□□□□ 0.07
RPN10YHR200W VTC2P43585 828 aa15.48■□□□□ 0.07
RPN10YHR200W ROG3P43602 733 aa15.48■□□□□ 0.07
RPN10YHR200W CNM67P53865 581 aaKnown RBP15.48■□□□□ 0.07
RPN10YHR200W AIM33Q04516 312 aa15.48■□□□□ 0.07
RPN10YHR200W SPH1Q06160 661 aa15.48■□□□□ 0.07
RPN10YHR200W OXR1Q08952 273 aa15.48■□□□□ 0.07
RPN10YHR200W TOM1Q03280 3268 aa15.48■□□□□ 0.07
RPN10YHR200W VMA2P16140 517 aaKnown RBP15.47■□□□□ 0.07
RPN10YHR200W YDJ1P25491 409 aaKnown RBP15.47■□□□□ 0.07
RPN10YHR200W GSY2P27472 705 aa15.47■□□□□ 0.07
RPN10YHR200W THI6P41835 540 aa15.47■□□□□ 0.07
RPN10YHR200W HUL5P53119 910 aa15.47■□□□□ 0.07
RPN10YHR200W YGR273CP53329 174 aa15.47■□□□□ 0.07
RPN10YHR200W CBK1P53894 756 aa15.47■□□□□ 0.07
RPN10YHR200W HCR1Q05775 265 aaKnown RBP15.47■□□□□ 0.07
RPN10YHR200W CDC19P00549 500 aaKnown RBP15.46■□□□□ 0.07
RPN10YHR200W TGL1P34163 548 aa15.46■□□□□ 0.07
RPN10YHR200W NOC2P39744 710 aaKnown RBP15.46■□□□□ 0.07
RPN10YHR200W DUS1P53759 423 aaKnown RBP15.46■□□□□ 0.07
RPN10YHR200W RBA50Q04418 439 aa15.46■□□□□ 0.07
RPN10YHR200W PSR2Q07949 397 aa15.46■□□□□ 0.07
RPN10YHR200W CFT2Q12102 859 aaPredicted RBP15.46■□□□□ 0.07
RPN10YHR200W ILV1P00927 576 aaKnown RBP15.45■□□□□ 0.06
RPN10YHR200W ORC6P38826 435 aa15.45■□□□□ 0.06
RPN10YHR200W GFD1Q04839 188 aaKnown RBP15.45■□□□□ 0.06
RPN10YHR200W SAM1P10659 382 aaKnown RBP15.44■□□□□ 0.06
RPN10YHR200W RSC30P38781 883 aa15.44■□□□□ 0.06
RPN10YHR200W NDT80P38830 627 aa15.44■□□□□ 0.06
RPN10YHR200W TMA64Q04600 565 aaKnown RBP15.44■□□□□ 0.06
RPN10YHR200W RKM4Q12504 494 aa15.44■□□□□ 0.06
RPN10YHR200W ARP6Q12509 438 aa15.44■□□□□ 0.06
RPN10YHR200W HVG1P0CE11 249 aa15.43■□□□□ 0.06
RPN10YHR200W PKC1P24583 1151 aa15.43■□□□□ 0.06
RPN10YHR200W PGM1P33401 570 aaKnown RBP15.43■□□□□ 0.06
RPN10YHR200W JIP4Q03361 876 aa15.43■□□□□ 0.06
RPN10YHR200W CST9Q06032 482 aa15.43■□□□□ 0.06
RPN10YHR200W CDC60P26637 1090 aaKnown RBP15.42■□□□□ 0.06
RPN10YHR200W MCR1P36060 302 aaKnown RBP15.42■□□□□ 0.06
RPN10YHR200W YGR125WP53273 1036 aa15.42■□□□□ 0.06
RPN10YHR200W ORC4P54791 529 aa15.42■□□□□ 0.06
RPN10YHR200W CLB5P30283 435 aa15.41■□□□□ 0.06
RPN10YHR200W SRP40P32583 406 aaPredicted RBP15.41■□□□□ 0.06
RPN10YHR200W ADE17P38009 592 aaKnown RBP15.41■□□□□ 0.06
RPN10YHR200W PHM6Q05637 104 aa15.41■□□□□ 0.06
RPN10YHR200W TY3A-GQ12173 290 aa15.41■□□□□ 0.06
RPN10YHR200W TY3A-IQ99219 290 aa15.41■□□□□ 0.06
RPN10YHR200W EUG1P32474 517 aa15.4■□□□□ 0.06
RPN10YHR200W UTR4P32626 227 aa15.4■□□□□ 0.06
RPN10YHR200W MPE1P35728 441 aaKnown RBP15.4■□□□□ 0.06
RPN10YHR200W PET10P36139 283 aa15.4■□□□□ 0.06
RPN10YHR200W FUS2Q05670 677 aa15.4■□□□□ 0.06
RPN10YHR200W ADY4Q05955 493 aa15.4■□□□□ 0.06
RPN10YHR200W ISA1Q07821 250 aaPredicted RBP15.4■□□□□ 0.06
RPN10YHR200W PGK1P00560 416 aaKnown RBP15.39■□□□□ 0.05
RPN10YHR200W PHR1P05066 565 aaKnown RBP RIP-Chip data15.39■□□□□ 0.05not detected
RPN10YHR200W SEC8P32855 1065 aa15.39■□□□□ 0.05
RPN10YHR200W ERG7P38604 731 aa15.39■□□□□ 0.05
RPN10YHR200W BCD1P38772 366 aa15.39■□□□□ 0.05
RPN10YHR200W NUP82P40368 713 aa15.39■□□□□ 0.05
RPN10YHR200W SPR3P41901 512 aa15.39■□□□□ 0.05
RPN10YHR200W SEC5P89102 971 aa15.39■□□□□ 0.05
RPN10YHR200W PTA1Q01329 785 aaPredicted RBP15.39■□□□□ 0.05
RPN10YHR200W TLG2Q08144 397 aa15.39■□□□□ 0.05
RPN10YHR200W APE3P37302 537 aaKnown RBP15.38■□□□□ 0.05
RPN10YHR200W DUS3Q06053 668 aaKnown RBP15.38■□□□□ 0.05
RPN10YHR200W MIP1P15801 1254 aa15.37■□□□□ 0.05
RPN10YHR200W FYV10P40492 516 aa15.37■□□□□ 0.05
RPN10YHR200W PGA2P53903 129 aa15.37■□□□□ 0.05
RPN10YHR200W SIP3P38717 1229 aa15.36■□□□□ 0.05
RPN10YHR200W ZPR1P53303 486 aaKnown RBP15.36■□□□□ 0.05
RPN10YHR200W AFT2Q08957 416 aa15.36■□□□□ 0.05
RPN10YHR200W SRD1P09007 221 aa15.35■□□□□ 0.05
RPN10YHR200W YEL076C-AP0CX16 216 aa15.35■□□□□ 0.05
RPN10YHR200W YLR464WP0CX17 216 aa15.35■□□□□ 0.05
RPN10YHR200W SAP190P36123 1033 aa15.35■□□□□ 0.05
RPN10YHR200W YEL076CP39971 216 aa15.35■□□□□ 0.05
RPN10YHR200W GPD2P41911 440 aaKnown RBP15.35■□□□□ 0.05
RPN10YHR200W SSL2Q00578 843 aa15.35■□□□□ 0.05
RPN10YHR200W WAR1Q03631 944 aa15.35■□□□□ 0.05
RPN10YHR200W SVF1Q05515 481 aa15.35■□□□□ 0.05
RPN10YHR200W CLN3P13365 580 aa15.34■□□□□ 0.05
RPN10YHR200W OM45P16547 393 aa15.34■□□□□ 0.05
RPN10YHR200W ISY1P21374 235 aaPredicted RBP15.34■□□□□ 0.05
RPN10YHR200W SUV3P32580 737 aa15.34■□□□□ 0.05
RPN10YHR200W IXR1P33417 597 aa15.34■□□□□ 0.05
RPN10YHR200W HMF1P40037 129 aaKnown RBP15.34■□□□□ 0.05
RPN10YHR200W YLR326WQ06170 240 aaKnown RBP15.34■□□□□ 0.05
RPN10YHR200W SPP382Q06411 708 aaPredicted RBP15.34■□□□□ 0.05
RPN10YHR200W WHI4Q07655 649 aaKnown RBP15.34■□□□□ 0.05
RPN10YHR200W TIF6Q12522 245 aaKnown RBP15.34■□□□□ 0.05
RPN10YHR200W CDC37P06101 506 aaKnown RBP15.33■□□□□ 0.04
RPN10YHR200W RAM2P29703 316 aa15.33■□□□□ 0.04
RPN10YHR200W SHP1P34223 423 aa15.33■□□□□ 0.04
RPN10YHR200W ASH1P34233 588 aa15.33■□□□□ 0.04
RPN10YHR200W PFK1P16861 987 aaKnown RBP15.32■□□□□ 0.04
RPN10YHR200W TKL1P23254 680 aaKnown RBP15.32■□□□□ 0.04
RPN10YHR200W CRD1Q07560 283 aa15.32■□□□□ 0.04
RPN10YHR200W VPS29P38759 282 aa15.31■□□□□ 0.04
RPN10YHR200W PIH1P38768 344 aa15.31■□□□□ 0.04
Retrieved 100 of 5,963 RNA–protein pairs in 59.8 ms