RNA–Protein interactions for RNA: YGR077C

PEX8, Transcript of Intraperoxisomal organizer of the peroxisomal import machinery, yeast

Gene PEX8, Length 1,770 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX8	YGR077C	KIP3	P53086	805 aa	Known RBP	3.12	□□□□□ -1.91
PEX8	YGR077C	ULP1	Q02724	621 aa		3.12	□□□□□ -1.91
PEX8	YGR077C	TAD3	Q9URQ3	322 aa		3.12	□□□□□ -1.91
PEX8	YGR077C	USO1	P25386	1790 aa		3.12	□□□□□ -1.91
PEX8	YGR077C	TY1A-LR4	P0C2I8	440 aa	Known RBP	3.11	□□□□□ -1.91
PEX8	YGR077C	TY1A-DR6	P0CX70	440 aa		3.11	□□□□□ -1.91
PEX8	YGR077C	TY1A-ER1	P0CX71	440 aa		3.11	□□□□□ -1.91
PEX8	YGR077C	TY1A-LR2	P0CX72	440 aa		3.11	□□□□□ -1.91
PEX8	YGR077C	TY1A-PL	P0CX73	440 aa		3.11	□□□□□ -1.91
PEX8	YGR077C	TY1A-JR1	P0CX74	440 aa		3.11	□□□□□ -1.91
PEX8	YGR077C	TY1A-LR3	P0CX75	440 aa		3.11	□□□□□ -1.91
PEX8	YGR077C	TY1A-ML2	P0CX76	440 aa		3.11	□□□□□ -1.91
PEX8	YGR077C	EXO5	P38289	585 aa		3.11	□□□□□ -1.91
PEX8	YGR077C	YPL109C	Q02981	657 aa		3.11	□□□□□ -1.91
PEX8	YGR077C	TY1A-GR1	Q12085	440 aa		3.11	□□□□□ -1.91
PEX8	YGR077C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	3.11	□□□□□ -1.91
PEX8	YGR077C	TY1A-OL	Q92392	440 aa	Known RBP	3.11	□□□□□ -1.91
PEX8	YGR077C	SEC8	P32855	1065 aa		3.1	□□□□□ -1.91
PEX8	YGR077C	WHI3	P34761	661 aa	Known RBP	3.1	□□□□□ -1.91
PEX8	YGR077C	MMM1	P41800	426 aa		3.1	□□□□□ -1.91
PEX8	YGR077C	YGR122W	P53272	402 aa		3.1	□□□□□ -1.91
PEX8	YGR077C	SPR28	Q04921	423 aa		3.1	□□□□□ -1.91
PEX8	YGR077C	YOR059C	Q08448	450 aa	Known RBP	3.1	□□□□□ -1.91
PEX8	YGR077C	OXR1	Q08952	273 aa		3.1	□□□□□ -1.91
PEX8	YGR077C	YIG1	Q08956	461 aa		3.1	□□□□□ -1.91
PEX8	YGR077C	YOR223W	Q12015	292 aa		3.1	□□□□□ -1.91
PEX8	YGR077C	MGE1	P38523	228 aa		3.1	□□□□□ -1.91
PEX8	YGR077C	RPS26A	P39938	119 aa	Known RBP	3.1	□□□□□ -1.91
PEX8	YGR077C	RPS26B	P39939	119 aa	Known RBP	3.1	□□□□□ -1.91
PEX8	YGR077C	PIC2	P40035	300 aa		3.1	□□□□□ -1.91
PEX8	YGR077C	CIT3	P43635	486 aa		3.1	□□□□□ -1.91
PEX8	YGR077C	UTP22	P53254	1237 aa	Predicted RBP	3.1	□□□□□ -1.91
PEX8	YGR077C	NOG1	Q02892	647 aa	Known RBP	3.1	□□□□□ -1.91
PEX8	YGR077C	ADI1	Q03677	179 aa		3.1	□□□□□ -1.91
PEX8	YGR077C	CAT8	P39113	1433 aa		3.09	□□□□□ -1.91
PEX8	YGR077C	HEM13	P11353	328 aa	Known RBP	3.09	□□□□□ -1.91
PEX8	YGR077C	CYC8	P14922	966 aa		3.09	□□□□□ -1.91
PEX8	YGR077C	YMR074C	Q04773	145 aa		3.09	□□□□□ -1.91
PEX8	YGR077C	YLL054C	Q12244	843 aa		3.09	□□□□□ -1.91
PEX8	YGR077C	RAD2	P07276	1031 aa		3.08	□□□□□ -1.92
PEX8	YGR077C	KAR2	P16474	682 aa	Known RBP	3.08	□□□□□ -1.92
PEX8	YGR077C	PRP6	P19735	899 aa	Predicted RBP	3.08	□□□□□ -1.92
PEX8	YGR077C	MSH3	P25336	1018 aa		3.08	□□□□□ -1.92
PEX8	YGR077C	ASF1	P32447	279 aa		3.08	□□□□□ -1.92
PEX8	YGR077C	NEM1	P38757	446 aa		3.08	□□□□□ -1.92
PEX8	YGR077C	SLS1	P42900	643 aa		3.08	□□□□□ -1.92
PEX8	YGR077C	GCV1	P48015	400 aa		3.08	□□□□□ -1.92
PEX8	YGR077C	MEC3	Q02574	474 aa		3.08	□□□□□ -1.92
PEX8	YGR077C	OYE2	Q03558	400 aa	Known RBP	3.08	□□□□□ -1.92
PEX8	YGR077C	GSF2	Q04697	403 aa	Known RBP	3.08	□□□□□ -1.92
PEX8	YGR077C	RDH54	P38086	958 aa		3.07	□□□□□ -1.92
PEX8	YGR077C	PEX28	P38848	579 aa		3.07	□□□□□ -1.92
PEX8	YGR077C	YGL140C	P53120	1219 aa		3.07	□□□□□ -1.92
PEX8	YGR077C	RCM1	P53972	490 aa		3.07	□□□□□ -1.92
PEX8	YGR077C	PEX13	P80667	386 aa		3.07	□□□□□ -1.92
PEX8	YGR077C	ALG6	Q12001	544 aa	Known RBP	3.07	□□□□□ -1.92
PEX8	YGR077C	PRE9	P23638	258 aa	Known RBP	3.07	□□□□□ -1.92
PEX8	YGR077C	GPT2	P36148	743 aa		3.07	□□□□□ -1.92
PEX8	YGR077C	RSM26	P47141	266 aa		3.07	□□□□□ -1.92
PEX8	YGR077C	YBT1	P32386	1661 aa		3.06	□□□□□ -1.92
PEX8	YGR077C	SEC23	P15303	768 aa	Known RBP	3.06	□□□□□ -1.92
PEX8	YGR077C	NFS1	P25374	497 aa		3.06	□□□□□ -1.92
PEX8	YGR077C	YPT53	P36019	220 aa		3.06	□□□□□ -1.92
PEX8	YGR077C	YKL077W	P36081	392 aa		3.06	□□□□□ -1.92
PEX8	YGR077C	REI1	P38344	393 aa	Predicted RBP	3.06	□□□□□ -1.92
PEX8	YGR077C	SHU2	P38957	223 aa		3.06	□□□□□ -1.92
PEX8	YGR077C	MRPS18	P42847	217 aa		3.06	□□□□□ -1.92
PEX8	YGR077C	DOT1	Q04089	582 aa	Known RBP	3.06	□□□□□ -1.92
PEX8	YGR077C	UTP5	Q04177	643 aa	Known RBP	3.06	□□□□□ -1.92
PEX8	YGR077C	YSP2	Q06681	1438 aa		3.06	□□□□□ -1.92
PEX8	YGR077C	SQT1	P35184	431 aa		3.05	□□□□□ -1.92
PEX8	YGR077C	ARL1	P38116	183 aa	Known RBP	3.05	□□□□□ -1.92
PEX8	YGR077C	OYE3	P41816	400 aa	Predicted RBP	3.05	□□□□□ -1.92
PEX8	YGR077C	YGR045C	P53229	120 aa		3.05	□□□□□ -1.92
PEX8	YGR077C	MCD1	Q12158	566 aa		3.05	□□□□□ -1.92
PEX8	YGR077C	AIM3	P38266	947 aa	Known RBP	3.05	□□□□□ -1.92
PEX8	YGR077C	GNP1	P48813	663 aa		3.05	□□□□□ -1.92
PEX8	YGR077C	ORC3	P54790	616 aa		3.05	□□□□□ -1.92
PEX8	YGR077C	VMR1	P38735	1592 aa		3.04	□□□□□ -1.92
PEX8	YGR077C	NUP188	P52593	1655 aa	Known RBP	3.04	□□□□□ -1.92
PEX8	YGR077C	VMA4	P22203	233 aa	Known RBP	3.04	□□□□□ -1.92
PEX8	YGR077C	ADP1	P25371	1049 aa		3.04	□□□□□ -1.92
PEX8	YGR077C	XKS1	P42826	600 aa		3.04	□□□□□ -1.92
PEX8	YGR077C	ELA1	P53861	379 aa	Predicted RBP	3.04	□□□□□ -1.92
PEX8	YGR077C	ESF1	Q06344	628 aa	Known RBP	3.04	□□□□□ -1.92
PEX8	YGR077C	EDE1	P34216	1381 aa		3.04	□□□□□ -1.92
PEX8	YGR077C	GCR1	P07261	785 aa		3.03	□□□□□ -1.92
PEX8	YGR077C	PEP7	P32609	515 aa		3.03	□□□□□ -1.92
PEX8	YGR077C	HXT13	P39924	564 aa		3.03	□□□□□ -1.92
PEX8	YGR077C	MSH4	P40965	878 aa	Predicted RBP	3.03	□□□□□ -1.92
PEX8	YGR077C	MTR4	P47047	1073 aa	Known RBP	3.03	□□□□□ -1.92
PEX8	YGR077C	ALT1	P52893	592 aa		3.03	□□□□□ -1.92
PEX8	YGR077C	HXT17	P53631	564 aa		3.03	□□□□□ -1.92
PEX8	YGR077C	HXT15	P54854	567 aa		3.03	□□□□□ -1.92
PEX8	YGR077C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	RIP-Chip
PEX8	YGR077C	RPS4A	P0CX35	261 aa	Known RBP	3.02	□□□□□ -1.93
PEX8	YGR077C	RPS4B	P0CX36	261 aa	Known RBP	3.02	□□□□□ -1.93
PEX8	YGR077C	ABZ1	P37254	787 aa	Predicted RBP	3.02	□□□□□ -1.93
PEX8	YGR077C	EAR1	Q03212	550 aa		3.02	□□□□□ -1.93
PEX8	YGR077C	RMD1	Q03441	430 aa		3.02	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms