RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C BOI1P38041 980 aaKnown RBP5.29□□□□□ -1.56
SEC9YGR009C MAK5P38112 773 aaPredicted RBP5.29□□□□□ -1.56
SEC9YGR009C ALD5P40047 520 aaKnown RBP5.29□□□□□ -1.56
SEC9YGR009C RPL34BP40525 121 aaKnown RBP5.29□□□□□ -1.56
SEC9YGR009C YJR107WP47145 328 aa5.29□□□□□ -1.56
SEC9YGR009C YMR1P47147 688 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
SEC9YGR009C MNP1P53163 194 aaPredicted RBP5.29□□□□□ -1.56
SEC9YGR009C RAT1Q02792 1006 aaKnown RBP5.29□□□□□ -1.56
SEC9YGR009C PHM7Q12252 991 aa5.29□□□□□ -1.56
SEC9YGR009C YOR131CQ12486 218 aa5.29□□□□□ -1.56
SEC9YGR009C SMC6Q12749 1114 aa5.29□□□□□ -1.56
SEC9YGR009C TRP2P00899 507 aaKnown RBP5.28□□□□□ -1.56
SEC9YGR009C ADE8P04161 214 aa5.28□□□□□ -1.56
SEC9YGR009C RAD16P31244 790 aa5.28□□□□□ -1.56
SEC9YGR009C YEL043WP32618 956 aa5.28□□□□□ -1.56
SEC9YGR009C MOT2P34909 587 aaKnown RBP5.28□□□□□ -1.56
SEC9YGR009C APD1P38281 316 aa5.28□□□□□ -1.56
SEC9YGR009C LRP1P38801 184 aaKnown RBP5.28□□□□□ -1.56
SEC9YGR009C ERP5P38819 212 aa5.28□□□□□ -1.56
SEC9YGR009C SGM1P47166 707 aa5.28□□□□□ -1.56
SEC9YGR009C ATF2P53296 535 aa5.28□□□□□ -1.56
SEC9YGR009C GIM3P53900 129 aa5.28□□□□□ -1.56
SEC9YGR009C UBP2Q01476 1272 aa5.28□□□□□ -1.56
SEC9YGR009C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
SEC9YGR009C TAF11Q04226 346 aa5.28□□□□□ -1.56
SEC9YGR009C SGD1Q06132 899 aa5.28□□□□□ -1.56
SEC9YGR009C RKM1Q08961 583 aaPredicted RBP5.28□□□□□ -1.56
SEC9YGR009C VMA2P16140 517 aaKnown RBP5.27□□□□□ -1.57
SEC9YGR009C KAR2P16474 682 aaKnown RBP5.27□□□□□ -1.57
SEC9YGR009C PDI1P17967 522 aaKnown RBP5.27□□□□□ -1.57
SEC9YGR009C SRM1P21827 482 aa5.27□□□□□ -1.57
SEC9YGR009C GUT1P32190 709 aa5.27□□□□□ -1.57
SEC9YGR009C DPH2P32461 534 aa5.27□□□□□ -1.57
SEC9YGR009C KIC1P38692 1080 aa5.27□□□□□ -1.57
SEC9YGR009C YIR014WP40570 242 aa5.27□□□□□ -1.57
SEC9YGR009C YRB1P41920 201 aaKnown RBP5.27□□□□□ -1.57
SEC9YGR009C YJL055WP47044 245 aa5.27□□□□□ -1.57
SEC9YGR009C LSC1P53598 329 aaKnown RBP5.27□□□□□ -1.57
SEC9YGR009C YNR029CP53729 429 aaKnown RBP5.27□□□□□ -1.57
SEC9YGR009C RRN5Q02983 363 aa5.27□□□□□ -1.57
SEC9YGR009C LOT6Q07923 191 aa5.27□□□□□ -1.57
SEC9YGR009C RSC58Q07979 502 aa5.27□□□□□ -1.57
SEC9YGR009C NEW1Q08972 1196 aaKnown RBP5.27□□□□□ -1.57
SEC9YGR009C MPD2Q99316 277 aa5.27□□□□□ -1.57
SEC9YGR009C STF1P01098 86 aa5.27□□□□□ -1.57
SEC9YGR009C GCD1P09032 578 aaPredicted RBP5.27□□□□□ -1.57
SEC9YGR009C DAL1P32375 460 aa5.27□□□□□ -1.57
SEC9YGR009C PSY4P38193 441 aa5.27□□□□□ -1.57
SEC9YGR009C REI1P38344 393 aaPredicted RBP5.27□□□□□ -1.57
SEC9YGR009C DED81P38707 554 aaKnown RBP5.27□□□□□ -1.57
SEC9YGR009C RGA1P39083 1007 aa5.27□□□□□ -1.57
SEC9YGR009C MET12P46151 657 aa5.27□□□□□ -1.57
SEC9YGR009C KXD1P53158 218 aa5.27□□□□□ -1.57
SEC9YGR009C BUL2Q03758 920 aaKnown RBP5.27□□□□□ -1.57
SEC9YGR009C CST9Q06032 482 aa5.27□□□□□ -1.57
SEC9YGR009C ADF1Q2V2Q1 113 aa5.27□□□□□ -1.57
SEC9YGR009C RAD50P12753 1312 aa5.26□□□□□ -1.57
SEC9YGR009C RTC1Q08281 1341 aa5.26□□□□□ -1.57
SEC9YGR009C CIT1P00890 479 aa5.26□□□□□ -1.57
SEC9YGR009C TRM1P15565 570 aaKnown RBP5.26□□□□□ -1.57
SEC9YGR009C SWH1P35845 1188 aa5.26□□□□□ -1.57
SEC9YGR009C NUP82P40368 713 aa5.26□□□□□ -1.57
SEC9YGR009C TMA108P40462 946 aa5.26□□□□□ -1.57
SEC9YGR009C MNT3P40549 630 aa5.26□□□□□ -1.57
SEC9YGR009C MPH1P40562 993 aa5.26□□□□□ -1.57
SEC9YGR009C INA22P40576 216 aa5.26□□□□□ -1.57
SEC9YGR009C MMM1P41800 426 aa5.26□□□□□ -1.57
SEC9YGR009C YML6P51998 286 aa5.26□□□□□ -1.57
SEC9YGR009C LSB1P53281 241 aa5.26□□□□□ -1.57
SEC9YGR009C ARP5P53946 755 aa5.26□□□□□ -1.57
SEC9YGR009C HOT1Q03213 719 aa5.26□□□□□ -1.57
SEC9YGR009C REH1Q06709 432 aa5.26□□□□□ -1.57
SEC9YGR009C ADY3Q07732 790 aa5.26□□□□□ -1.57
SEC9YGR009C PPM2Q08282 695 aa5.26□□□□□ -1.57
SEC9YGR009C PIN2Q12057 282 aa5.26□□□□□ -1.57
SEC9YGR009C MNL2Q12205 849 aa5.26□□□□□ -1.57
SEC9YGR009C TPS2P31688 896 aaKnown RBP5.25□□□□□ -1.57
SEC9YGR009C YKL023WP36103 277 aaKnown RBP5.25□□□□□ -1.57
SEC9YGR009C YHL050CP38721 697 aa5.25□□□□□ -1.57
SEC9YGR009C YHB1P39676 399 aaKnown RBP5.25□□□□□ -1.57
SEC9YGR009C VPS8P39702 1274 aa5.25□□□□□ -1.57
SEC9YGR009C AIM10P39965 576 aaKnown RBP5.25□□□□□ -1.57
SEC9YGR009C KAP123P40069 1113 aaKnown RBP5.25□□□□□ -1.57
SEC9YGR009C RSM25P40496 264 aa5.25□□□□□ -1.57
SEC9YGR009C YAP5P40574 245 aa5.25□□□□□ -1.57
SEC9YGR009C GPP1P41277 250 aaKnown RBP5.25□□□□□ -1.57
SEC9YGR009C NUP85P46673 744 aa5.25□□□□□ -1.57
SEC9YGR009C SPC105P53148 917 aa5.25□□□□□ -1.57
SEC9YGR009C YGR067CP53243 804 aa5.25□□□□□ -1.57
SEC9YGR009C UTP22P53254 1237 aaPredicted RBP5.25□□□□□ -1.57
SEC9YGR009C VPS16Q03308 798 aa5.25□□□□□ -1.57
SEC9YGR009C YKU80Q04437 629 aa5.25□□□□□ -1.57
SEC9YGR009C MCP2Q06567 569 aa5.25□□□□□ -1.57
SEC9YGR009C YPR204WQ08995 1032 aa5.25□□□□□ -1.57
SEC9YGR009C REX3Q12090 404 aa5.25□□□□□ -1.57
SEC9YGR009C APC11Q12157 165 aa5.25□□□□□ -1.57
SEC9YGR009C YEL077CQ3E7X8 1277 aa5.25□□□□□ -1.57
SEC9YGR009C VPS3P23643 1011 aa5.25□□□□□ -1.57
SEC9YGR009C MRS6P32864 603 aaKnown RBP5.25□□□□□ -1.57
SEC9YGR009C PPQ1P32945 549 aa5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms