RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C ENT3P47160 408 aa4.76□□□□□ -1.65
VAB2YEL005C SIW14P53965 281 aa4.76□□□□□ -1.65
VAB2YEL005C SPO20Q04359 397 aa4.76□□□□□ -1.65
VAB2YEL005C ALG6Q12001 544 aaKnown RBP4.76□□□□□ -1.65
VAB2YEL005C FAL1Q12099 399 aaKnown RBP4.76□□□□□ -1.65
VAB2YEL005C NEM1P38757 446 aa4.75□□□□□ -1.65
VAB2YEL005C YAR028WP39548 234 aa4.75□□□□□ -1.65
VAB2YEL005C SNF7P39929 240 aaKnown RBP4.75□□□□□ -1.65
VAB2YEL005C UTP5Q04177 643 aaKnown RBP4.75□□□□□ -1.65
VAB2YEL005C RPS13P05756 151 aaKnown RBP4.74□□□□□ -1.65
VAB2YEL005C FAA4P47912 694 aaKnown RBP4.74□□□□□ -1.65
VAB2YEL005C RKM2Q03942 479 aa4.74□□□□□ -1.65
VAB2YEL005C RDH54P38086 958 aa4.73□□□□□ -1.65
VAB2YEL005C MCM7P38132 845 aa4.73□□□□□ -1.65
VAB2YEL005C GTS1P40956 396 aa4.73□□□□□ -1.65
VAB2YEL005C TYW3P53177 273 aa4.73□□□□□ -1.65
VAB2YEL005C ELA1P53861 379 aaPredicted RBP4.73□□□□□ -1.65
VAB2YEL005C ROD1Q02805 837 aa4.73□□□□□ -1.65
VAB2YEL005C AIM44Q99299 758 aa4.73□□□□□ -1.65
VAB2YEL005C PRI2P20457 528 aa4.72□□□□□ -1.65
VAB2YEL005C SYP1P25623 870 aaKnown RBP4.72□□□□□ -1.65
VAB2YEL005C NNK1P36003 928 aa4.72□□□□□ -1.65
VAB2YEL005C VPS53P47061 822 aa4.72□□□□□ -1.65
VAB2YEL005C YML122CQ03207 126 aa4.72□□□□□ -1.65
VAB2YEL005C TRP2P00899 507 aaKnown RBP4.71□□□□□ -1.66
VAB2YEL005C BAS1P22035 811 aa4.71□□□□□ -1.66
VAB2YEL005C LYP1P32487 611 aa4.71□□□□□ -1.66
VAB2YEL005C MKK2P32491 506 aa4.71□□□□□ -1.66
VAB2YEL005C YGR045CP53229 120 aa4.71□□□□□ -1.66
VAB2YEL005C YGR053CP53234 283 aa4.71□□□□□ -1.66
VAB2YEL005C TDA5Q06417 326 aaKnown RBP4.71□□□□□ -1.66
VAB2YEL005C PTC5Q12511 572 aa4.71□□□□□ -1.66
VAB2YEL005C HEM13P11353 328 aaKnown RBP4.7□□□□□ -1.66
VAB2YEL005C RER2P35196 286 aa4.7□□□□□ -1.66
VAB2YEL005C ALG3P38179 458 aa4.7□□□□□ -1.66
VAB2YEL005C CNN1P43618 361 aa4.7□□□□□ -1.66
VAB2YEL005C YJL049WP47048 450 aa4.7□□□□□ -1.66
VAB2YEL005C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
VAB2YEL005C HRK1Q08732 759 aaKnown RBP4.7□□□□□ -1.66
VAB2YEL005C SSF2Q12153 453 aaPredicted RBP4.7□□□□□ -1.66
VAB2YEL005C SMY2P32909 740 aaKnown RBP4.69□□□□□ -1.66
VAB2YEL005C DUT1P33317 147 aa4.69□□□□□ -1.66
VAB2YEL005C GNP1P48813 663 aa4.69□□□□□ -1.66
VAB2YEL005C HNT2P49775 206 aa4.69□□□□□ -1.66
VAB2YEL005C OPI10Q08202 246 aa4.69□□□□□ -1.66
VAB2YEL005C YLR358CO13565 187 aa4.68□□□□□ -1.66
VAB2YEL005C DBP5P20449 482 aaKnown RBP4.68□□□□□ -1.66
VAB2YEL005C RET1P22276 1149 aaKnown RBP4.68□□□□□ -1.66
VAB2YEL005C YKL107WP34251 309 aa4.68□□□□□ -1.66
VAB2YEL005C HXT13P39924 564 aa4.68□□□□□ -1.66
VAB2YEL005C HXT17P53631 564 aa4.68□□□□□ -1.66
VAB2YEL005C HXT15P54854 567 aa4.68□□□□□ -1.66
VAB2YEL005C RAT1Q02792 1006 aaKnown RBP4.68□□□□□ -1.66
VAB2YEL005C EEB1Q02891 456 aa4.68□□□□□ -1.66
VAB2YEL005C RSA3Q05942 220 aaKnown RBP4.68□□□□□ -1.66
VAB2YEL005C YLR257WQ06146 321 aaKnown RBP4.68□□□□□ -1.66
VAB2YEL005C INO1P11986 533 aa4.67□□□□□ -1.66
VAB2YEL005C SRP40P32583 406 aaPredicted RBP4.67□□□□□ -1.66
VAB2YEL005C MOT2P34909 587 aaKnown RBP4.67□□□□□ -1.66
VAB2YEL005C RGD1P38339 666 aa4.67□□□□□ -1.66
VAB2YEL005C QNS1P38795 714 aaKnown RBP4.67□□□□□ -1.66
VAB2YEL005C NAN1Q02931 896 aaKnown RBP4.67□□□□□ -1.66
VAB2YEL005C YPL260WQ08977 551 aa4.67□□□□□ -1.66
VAB2YEL005C YOR131CQ12486 218 aa4.67□□□□□ -1.66
VAB2YEL005C RKM4Q12504 494 aa4.67□□□□□ -1.66
VAB2YEL005C PRE10P21242 288 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
VAB2YEL005C GRX1P25373 110 aaKnown RBP4.66□□□□□ -1.66
VAB2YEL005C SLI1P53304 468 aa4.66□□□□□ -1.66
VAB2YEL005C TPP1Q03796 238 aa4.66□□□□□ -1.66
VAB2YEL005C TIF35Q04067 274 aaKnown RBP4.66□□□□□ -1.66
VAB2YEL005C YOL098CQ12496 1037 aa4.66□□□□□ -1.66
VAB2YEL005C YTA7P40340 1379 aa4.65□□□□□ -1.66
VAB2YEL005C PUF4P25339 888 aaKnown RBP RIP-Chip data4.65□□□□□ -1.67not detected
VAB2YEL005C AGP1P25376 633 aa4.65□□□□□ -1.67
VAB2YEL005C SBA1P28707 216 aaKnown RBP4.65□□□□□ -1.67
VAB2YEL005C MLS1P30952 554 aa4.65□□□□□ -1.67
VAB2YEL005C ABD1P32783 436 aaPredicted RBP4.65□□□□□ -1.67
VAB2YEL005C AFG2P32794 780 aa4.65□□□□□ -1.67
VAB2YEL005C PIN4P34217 668 aaKnown RBP RIP-Chip data4.65□□□□□ -1.67not detected
VAB2YEL005C MRP8P35719 219 aa4.65□□□□□ -1.67
VAB2YEL005C NMD3P38861 518 aaKnown RBP4.65□□□□□ -1.67
VAB2YEL005C YLR225CQ05948 407 aaKnown RBP4.65□□□□□ -1.67
VAB2YEL005C SPP382Q06411 708 aaPredicted RBP4.65□□□□□ -1.67
VAB2YEL005C SPO75Q07798 868 aa4.65□□□□□ -1.67
VAB2YEL005C CDC53Q12018 815 aaKnown RBP4.65□□□□□ -1.67
VAB2YEL005C SPO21Q12411 609 aa4.65□□□□□ -1.67
VAB2YEL005C OSH2Q12451 1283 aa4.65□□□□□ -1.67
VAB2YEL005C SCT1P32784 759 aa4.64□□□□□ -1.67
VAB2YEL005C YKL091CP33324 310 aaKnown RBP4.64□□□□□ -1.67
VAB2YEL005C OCA5P38738 679 aa4.64□□□□□ -1.67
VAB2YEL005C SPF1P39986 1215 aaKnown RBP4.64□□□□□ -1.67
VAB2YEL005C YGL176CP46945 554 aa4.64□□□□□ -1.67
VAB2YEL005C TIM54P47045 478 aa4.64□□□□□ -1.67
VAB2YEL005C TPO2P53283 614 aa4.64□□□□□ -1.67
VAB2YEL005C PUS7Q08647 676 aaKnown RBP4.64□□□□□ -1.67
VAB2YEL005C GNT1Q12096 491 aa4.64□□□□□ -1.67
VAB2YEL005C COQ4O13525 335 aa4.63□□□□□ -1.67
VAB2YEL005C KIP1P28742 1111 aa4.63□□□□□ -1.67
VAB2YEL005C YKL069WP36088 180 aa4.63□□□□□ -1.67
VAB2YEL005C YJL045WP47052 634 aa4.63□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms