RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeast

Gene SDC1, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDC1	YDR469W	RSM24	Q03976	319 aa		4.36	□□□□□ -1.71
SDC1	YDR469W	CDC6	P09119	513 aa		4.35	□□□□□ -1.71
SDC1	YDR469W	SNF5	P18480	905 aa		4.35	□□□□□ -1.71
SDC1	YDR469W	CHS7	P38843	316 aa		4.35	□□□□□ -1.71
SDC1	YDR469W	DAL4	Q04895	635 aa		4.35	□□□□□ -1.71
SDC1	YDR469W	EST2	Q06163	884 aa		4.35	□□□□□ -1.71
SDC1	YDR469W	PTC5	Q12511	572 aa		4.35	□□□□□ -1.71
SDC1	YDR469W	YGL140C	P53120	1219 aa		4.34	□□□□□ -1.71
SDC1	YDR469W	DED1	P06634	604 aa	Known RBP	4.33	□□□□□ -1.72
SDC1	YDR469W	RFC5	P38251	354 aa		4.33	□□□□□ -1.72
SDC1	YDR469W	YFL054C	P43549	646 aa		4.33	□□□□□ -1.72
SDC1	YDR469W	GTF1	P53260	183 aa	Predicted RBP	4.33	□□□□□ -1.72
SDC1	YDR469W	KIN4	Q01919	800 aa		4.33	□□□□□ -1.72
SDC1	YDR469W	YAP6	Q03935	383 aa		4.33	□□□□□ -1.72
SDC1	YDR469W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.33	□□□□□ -1.72	not detected
SDC1	YDR469W	RIB2	Q12362	591 aa	Known RBP	4.33	□□□□□ -1.72
SDC1	YDR469W	YBL113C	Q7M4S9	792 aa		4.33	□□□□□ -1.72
SDC1	YDR469W	KAR2	P16474	682 aa	Known RBP	4.32	□□□□□ -1.72
SDC1	YDR469W	ALG3	P38179	458 aa		4.32	□□□□□ -1.72
SDC1	YDR469W	TOS4	Q06266	489 aa		4.32	□□□□□ -1.72
SDC1	YDR469W	GCV2	P49095	1034 aa		4.31	□□□□□ -1.72
SDC1	YDR469W	PBP1	P53297	722 aa	Known RBP	4.31	□□□□□ -1.72
SDC1	YDR469W	YLR224W	Q05947	369 aa		4.31	□□□□□ -1.72
SDC1	YDR469W	PMA1	P05030	918 aa	Known RBP	4.3	□□□□□ -1.72
SDC1	YDR469W	VPS62	P53285	467 aa		4.3	□□□□□ -1.72
SDC1	YDR469W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.3	□□□□□ -1.72	not detected
SDC1	YDR469W	EMC1	P25574	760 aa		4.29	□□□□□ -1.72
SDC1	YDR469W	MSS4	P38994	779 aa		4.29	□□□□□ -1.72
SDC1	YDR469W	RPN3	P40016	523 aa	Known RBP	4.29	□□□□□ -1.72
SDC1	YDR469W	APL1	P27351	700 aa		4.28	□□□□□ -1.72
SDC1	YDR469W	DEF1	P35732	738 aa	Known RBP	4.28	□□□□□ -1.72
SDC1	YDR469W	URN1	Q06525	465 aa	Known RBP	4.28	□□□□□ -1.72
SDC1	YDR469W	SEC23	P15303	768 aa	Known RBP	4.27	□□□□□ -1.73
SDC1	YDR469W	VPS35	P34110	944 aa		4.27	□□□□□ -1.73
SDC1	YDR469W	DAK2	P43550	591 aa		4.27	□□□□□ -1.73
SDC1	YDR469W	ADI1	Q03677	179 aa		4.27	□□□□□ -1.73
SDC1	YDR469W	YPL260W	Q08977	551 aa		4.27	□□□□□ -1.73
SDC1	YDR469W	HMI1	Q12039	706 aa		4.27	□□□□□ -1.73
SDC1	YDR469W	SVS1	Q12254	260 aa		4.27	□□□□□ -1.73
SDC1	YDR469W	PHO4	P07270	312 aa	Known RBP	4.26	□□□□□ -1.73
SDC1	YDR469W	KIN2	P13186	1147 aa	Known RBP	4.26	□□□□□ -1.73
SDC1	YDR469W	DCG1	P32460	244 aa		4.26	□□□□□ -1.73
SDC1	YDR469W	YPL109C	Q02981	657 aa		4.26	□□□□□ -1.73
SDC1	YDR469W	PPM2	Q08282	695 aa		4.26	□□□□□ -1.73
SDC1	YDR469W	GCD6	P32501	712 aa	Known RBP	4.25	□□□□□ -1.73
SDC1	YDR469W	RAT1	Q02792	1006 aa	Known RBP	4.25	□□□□□ -1.73
SDC1	YDR469W	PLB1	P39105	664 aa		4.24	□□□□□ -1.73
SDC1	YDR469W	SIP5	P40210	489 aa	Known RBP	4.24	□□□□□ -1.73
SDC1	YDR469W	HAT1	Q12341	374 aa		4.24	□□□□□ -1.73
SDC1	YDR469W	CDC3	P32457	520 aa	Known RBP	4.23	□□□□□ -1.73
SDC1	YDR469W	FAA3	P39002	694 aa		4.23	□□□□□ -1.73
SDC1	YDR469W	PIC2	P40035	300 aa		4.23	□□□□□ -1.73
SDC1	YDR469W	MOH1	P38191	138 aa		4.22	□□□□□ -1.73
SDC1	YDR469W	SIZ1	Q04195	904 aa		4.22	□□□□□ -1.73
SDC1	YDR469W	NOP12	Q08208	459 aa	Known RBP	4.22	□□□□□ -1.73
SDC1	YDR469W	OXR1	Q08952	273 aa		4.22	□□□□□ -1.73
SDC1	YDR469W	YER152C	P10356	443 aa		4.21	□□□□□ -1.74
SDC1	YDR469W	OAR1	P35731	278 aa		4.21	□□□□□ -1.74
SDC1	YDR469W	YHL050C	P38721	697 aa		4.21	□□□□□ -1.74
SDC1	YDR469W	YHR219W	P38900	624 aa		4.21	□□□□□ -1.74
SDC1	YDR469W	ROD1	Q02805	837 aa		4.21	□□□□□ -1.74
SDC1	YDR469W	PEP7	P32609	515 aa		4.19	□□□□□ -1.74
SDC1	YDR469W	UBA2	P52488	636 aa		4.19	□□□□□ -1.74
SDC1	YDR469W	MSC2	Q03455	724 aa		4.19	□□□□□ -1.74
SDC1	YDR469W	SSA1	P10591	642 aa	Known RBP	4.18	□□□□□ -1.74
SDC1	YDR469W	HRR25	P29295	494 aa	Known RBP	4.18	□□□□□ -1.74
SDC1	YDR469W	MET4	P32389	672 aa		4.18	□□□□□ -1.74
SDC1	YDR469W	MKK2	P32491	506 aa		4.18	□□□□□ -1.74
SDC1	YDR469W	RLF2	Q12495	606 aa		4.18	□□□□□ -1.74
SDC1	YDR469W	MLS1	P30952	554 aa		4.17	□□□□□ -1.74
SDC1	YDR469W	TPO1	Q07824	586 aa		4.17	□□□□□ -1.74
SDC1	YDR469W	AIM39	Q08223	395 aa		4.17	□□□□□ -1.74
SDC1	YDR469W	HXK1	P04806	485 aa	Known RBP	4.16	□□□□□ -1.74
SDC1	YDR469W	RGD1	P38339	666 aa		4.16	□□□□□ -1.74
SDC1	YDR469W	MND2	P40577	368 aa		4.16	□□□□□ -1.74
SDC1	YDR469W	ATG13	Q06628	738 aa		4.16	□□□□□ -1.74
SDC1	YDR469W	PFK1	P16861	987 aa	Known RBP	4.15	□□□□□ -1.75
SDC1	YDR469W	BAS1	P22035	811 aa		4.15	□□□□□ -1.75
SDC1	YDR469W	TAF13	P11747	167 aa		4.14	□□□□□ -1.75
SDC1	YDR469W	ACE2	P21192	770 aa		4.14	□□□□□ -1.75
SDC1	YDR469W	POA1	P38218	177 aa		4.14	□□□□□ -1.75
SDC1	YDR469W	IOC3	P43596	787 aa		4.14	□□□□□ -1.75
SDC1	YDR469W	MET12	P46151	657 aa		4.14	□□□□□ -1.75
SDC1	YDR469W	EXG2	P52911	562 aa		4.14	□□□□□ -1.75
SDC1	YDR469W	ADY3	Q07732	790 aa		4.14	□□□□□ -1.75
SDC1	YDR469W	ATF1	P40353	525 aa		4.13	□□□□□ -1.75
SDC1	YDR469W	SIW14	P53965	281 aa		4.13	□□□□□ -1.75
SDC1	YDR469W	LGE1	Q02796	332 aa	Known RBP	4.13	□□□□□ -1.75
SDC1	YDR469W	BDF2	Q07442	638 aa		4.13	□□□□□ -1.75
SDC1	YDR469W	HIS5	P07172	385 aa		4.12	□□□□□ -1.75
SDC1	YDR469W	SYP1	P25623	870 aa	Known RBP	4.12	□□□□□ -1.75
SDC1	YDR469W	RPT1	P33299	467 aa	Known RBP	4.12	□□□□□ -1.75
SDC1	YDR469W	UGA2	P38067	497 aa		4.12	□□□□□ -1.75
SDC1	YDR469W	ZRG8	P40021	1076 aa		4.12	□□□□□ -1.75
SDC1	YDR469W	MXR1	P40029	184 aa		4.12	□□□□□ -1.75
SDC1	YDR469W	HFM1	P51979	1187 aa		4.12	□□□□□ -1.75
SDC1	YDR469W	BI4	P03879	638 aa		4.11	□□□□□ -1.75
SDC1	YDR469W	ENA1	P13587	1091 aa		4.11	□□□□□ -1.75
SDC1	YDR469W	HXT13	P39924	564 aa		4.11	□□□□□ -1.75
SDC1	YDR469W	SNM1	P40993	198 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms