RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	TY1A-JR1	P0CX74	440 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	TY1A-LR3	P0CX75	440 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	TY1A-ML2	P0CX76	440 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	VMA4	P22203	233 aa	Known RBP	3.58	□□□□□ -1.84
TFB1	YDR311W	MEF1	P25039	761 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	TFA2	P36145	328 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	YER156C	P40093	338 aa	Known RBP	3.58	□□□□□ -1.84
TFB1	YDR311W	NOP2	P40991	618 aa	Known RBP	3.58	□□□□□ -1.84
TFB1	YDR311W	MTR4	P47047	1073 aa	Known RBP	3.58	□□□□□ -1.84
TFB1	YDR311W	YJR124C	P47159	448 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	YNL193W	P53870	558 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
TFB1	YDR311W	YDL124W	Q07551	312 aa	Known RBP	3.58	□□□□□ -1.84
TFB1	YDR311W	TY1A-GR1	Q12085	440 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	3.58	□□□□□ -1.84
TFB1	YDR311W	TY1A-OL	Q92392	440 aa	Known RBP	3.58	□□□□□ -1.84
TFB1	YDR311W	HBN1	Q96VH4	193 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	SYP1	P25623	870 aa	Known RBP	3.57	□□□□□ -1.84
TFB1	YDR311W	HBS1	P32769	611 aa	Known RBP	3.57	□□□□□ -1.84
TFB1	YDR311W	PAN5	P38787	379 aa		3.57	□□□□□ -1.84
TFB1	YDR311W	INP51	P40559	946 aa	Known RBP	3.57	□□□□□ -1.84
TFB1	YDR311W	GPG1	P53130	126 aa		3.57	□□□□□ -1.84
TFB1	YDR311W	YNR065C	P53751	1116 aa		3.57	□□□□□ -1.84
TFB1	YDR311W	EST2	Q06163	884 aa		3.57	□□□□□ -1.84
TFB1	YDR311W	AOS1	Q06624	347 aa		3.57	□□□□□ -1.84
TFB1	YDR311W	MRP10	O75012	95 aa		3.56	□□□□□ -1.84
TFB1	YDR311W	HTS1	P07263	546 aa	Known RBP	3.56	□□□□□ -1.84
TFB1	YDR311W	PRP9	P19736	530 aa	Known RBP	3.56	□□□□□ -1.84
TFB1	YDR311W	CDC11	P32458	415 aa		3.56	□□□□□ -1.84
TFB1	YDR311W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.56	□□□□□ -1.84	not detected
TFB1	YDR311W	YKL107W	P34251	309 aa		3.56	□□□□□ -1.84
TFB1	YDR311W	YBR284W	P38150	797 aa		3.56	□□□□□ -1.84
TFB1	YDR311W	SHU2	P38957	223 aa		3.56	□□□□□ -1.84
TFB1	YDR311W	CCC2	P38995	1004 aa		3.56	□□□□□ -1.84
TFB1	YDR311W	SLN1	P39928	1220 aa	Predicted RBP	3.56	□□□□□ -1.84
TFB1	YDR311W	KRI1	P42846	591 aa	Known RBP	3.56	□□□□□ -1.84
TFB1	YDR311W	SLS1	P42900	643 aa		3.56	□□□□□ -1.84
TFB1	YDR311W	ALO1	P54783	526 aa	Known RBP	3.56	□□□□□ -1.84
TFB1	YDR311W	GIC2	Q06648	383 aa		3.56	□□□□□ -1.84
TFB1	YDR311W	THI73	Q07904	523 aa		3.56	□□□□□ -1.84
TFB1	YDR311W	YOR378W	Q08902	515 aa		3.56	□□□□□ -1.84
TFB1	YDR311W	YDR215C	Q12240	137 aa		3.56	□□□□□ -1.84
TFB1	YDR311W	RKM4	Q12504	494 aa		3.56	□□□□□ -1.84
TFB1	YDR311W	GLT1	Q12680	2145 aa	Known RBP	3.56	□□□□□ -1.84
TFB1	YDR311W	YKL077W	P36081	392 aa		3.56	□□□□□ -1.84
TFB1	YDR311W	SIP5	P40210	489 aa	Known RBP	3.56	□□□□□ -1.84
TFB1	YDR311W	SEC26	P41810	973 aa	Known RBP	3.56	□□□□□ -1.84
TFB1	YDR311W	LSB6	P42951	607 aa		3.56	□□□□□ -1.84
TFB1	YDR311W	ENT3	P47160	408 aa		3.56	□□□□□ -1.84
TFB1	YDR311W	BIO5	P53744	561 aa	Known RBP	3.56	□□□□□ -1.84
TFB1	YDR311W	SND1	Q04007	877 aa		3.56	□□□□□ -1.84
TFB1	YDR311W	UTP5	Q04177	643 aa	Known RBP	3.56	□□□□□ -1.84
TFB1	YDR311W	NAR1	P23503	491 aa	Known RBP	3.55	□□□□□ -1.84
TFB1	YDR311W	PGM2	P37012	569 aa	Known RBP	3.55	□□□□□ -1.84
TFB1	YDR311W	MCM7	P38132	845 aa		3.55	□□□□□ -1.84
TFB1	YDR311W	FUI1	P38196	639 aa		3.55	□□□□□ -1.84
TFB1	YDR311W	NEM1	P38757	446 aa		3.55	□□□□□ -1.84
TFB1	YDR311W	NIT1	P40447	199 aa		3.55	□□□□□ -1.84
TFB1	YDR311W	PMT3	P47190	753 aa		3.55	□□□□□ -1.84
TFB1	YDR311W	UME1	Q03010	460 aa		3.55	□□□□□ -1.84
TFB1	YDR311W	ECM16	Q04217	1267 aa	Known RBP	3.55	□□□□□ -1.84
TFB1	YDR311W	YLR001C	Q07895	862 aa		3.55	□□□□□ -1.84
TFB1	YDR311W	SLX4	Q12098	748 aa		3.55	□□□□□ -1.84
TFB1	YDR311W	MDM12	Q92328	271 aa		3.55	□□□□□ -1.84
TFB1	YDR311W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.54	□□□□□ -1.84	not detected
TFB1	YDR311W	TOM70	P07213	617 aa	Known RBP	3.54	□□□□□ -1.84
TFB1	YDR311W	KAR1	P11927	433 aa		3.54	□□□□□ -1.84
TFB1	YDR311W	DBP5	P20449	482 aa	Known RBP	3.54	□□□□□ -1.84
TFB1	YDR311W	ADD66	P36040	267 aa		3.54	□□□□□ -1.84
TFB1	YDR311W	GEM1	P39722	662 aa		3.54	□□□□□ -1.84
TFB1	YDR311W	CNN1	P43618	361 aa		3.54	□□□□□ -1.84
TFB1	YDR311W	GIS4	Q04233	774 aa		3.54	□□□□□ -1.84
TFB1	YDR311W	NHA1	Q99271	985 aa		3.54	□□□□□ -1.84
TFB1	YDR311W	NUP145	P49687	1317 aa		3.54	□□□□□ -1.84
TFB1	YDR311W	VBA3	P25594	458 aa		3.54	□□□□□ -1.84
TFB1	YDR311W	AFG2	P32794	780 aa		3.54	□□□□□ -1.84
TFB1	YDR311W	ALG14	P38242	237 aa		3.54	□□□□□ -1.84
TFB1	YDR311W	DSS1	P39112	969 aa		3.54	□□□□□ -1.84
TFB1	YDR311W	MPH1	P40562	993 aa		3.54	□□□□□ -1.84
TFB1	YDR311W	SDA1	P53313	767 aa	Known RBP	3.54	□□□□□ -1.84
TFB1	YDR311W	TGL2	P54857	326 aa		3.54	□□□□□ -1.84
TFB1	YDR311W	RSC2	Q06488	889 aa		3.54	□□□□□ -1.84
TFB1	YDR311W	MSD1	P15179	658 aa	Known RBP	3.53	□□□□□ -1.84
TFB1	YDR311W	TRX2	P22803	104 aa	Known RBP	3.53	□□□□□ -1.84
TFB1	YDR311W	MLS1	P30952	554 aa		3.53	□□□□□ -1.84
TFB1	YDR311W	FET4	P40988	552 aa		3.53	□□□□□ -1.84
TFB1	YDR311W	UBP6	P43593	499 aa	Known RBP	3.53	□□□□□ -1.84
TFB1	YDR311W	PRY1	P47032	299 aa		3.53	□□□□□ -1.84
TFB1	YDR311W	BUD9	P53226	547 aa		3.53	□□□□□ -1.84
TFB1	YDR311W	YNR063W	P53749	607 aa		3.53	□□□□□ -1.84
TFB1	YDR311W	COG6	P53959	839 aa		3.53	□□□□□ -1.84
TFB1	YDR311W	FAP7	Q12055	197 aa	Predicted RBP	3.53	□□□□□ -1.84
TFB1	YDR311W	YPR071W	Q12346	211 aa		3.53	□□□□□ -1.84
TFB1	YDR311W	PWP2	P25635	923 aa	Known RBP	3.52	□□□□□ -1.85
TFB1	YDR311W	EUG1	P32474	517 aa		3.52	□□□□□ -1.85
TFB1	YDR311W	VPS24	P36095	224 aa	Known RBP	3.52	□□□□□ -1.85
TFB1	YDR311W	TYS1	P36421	394 aa	Known RBP	3.52	□□□□□ -1.85
TFB1	YDR311W	GPP1	P41277	250 aa	Known RBP	3.52	□□□□□ -1.85
TFB1	YDR311W	UTP22	P53254	1237 aa	Predicted RBP	3.52	□□□□□ -1.85
TFB1	YDR311W	YDR306C	Q06640	478 aa		3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms