RNA–Protein interactions for RNA: YDL168W

SFA1, Transcript of Bifunctional alcohol dehydrogenase and formaldehyde dehydrogenase, yeast

Gene SFA1, Length 1,161 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SFA1	YDL168W	ALG1	P16661	449 aa		11.28	□□□□□ -0.6
SFA1	YDL168W	MCM4	P30665	933 aa	Known RBP	11.28	□□□□□ -0.6
SFA1	YDL168W	DBP7	P36120	742 aa	Known RBP	11.28	□□□□□ -0.6
SFA1	YDL168W	HYR1	P40581	163 aa	Known RBP	11.28	□□□□□ -0.6
SFA1	YDL168W	YMR321C	Q04898	105 aa		11.28	□□□□□ -0.6
SFA1	YDL168W	ILV1	P00927	576 aa	Known RBP	11.27	□□□□□ -0.61
SFA1	YDL168W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	11.27	□□□□□ -0.61	not detected
SFA1	YDL168W	SRO9	P25567	434 aa	Known RBP	11.27	□□□□□ -0.61
SFA1	YDL168W	YUR1	P26725	428 aa		11.27	□□□□□ -0.61
SFA1	YDL168W	YGR153W	P48238	217 aa		11.27	□□□□□ -0.61
SFA1	YDL168W	HAP5	Q02516	242 aa		11.27	□□□□□ -0.61
SFA1	YDL168W	OYE2	Q03558	400 aa	Known RBP	11.27	□□□□□ -0.61
SFA1	YDL168W	SES1	P07284	462 aa	Known RBP	11.26	□□□□□ -0.61
SFA1	YDL168W	GSY1	P23337	708 aa		11.26	□□□□□ -0.61
SFA1	YDL168W	MSP1	P28737	362 aa		11.26	□□□□□ -0.61
SFA1	YDL168W	BRE2	P43132	505 aa		11.26	□□□□□ -0.61
SFA1	YDL168W	SDA1	P53313	767 aa	Known RBP	11.26	□□□□□ -0.61
SFA1	YDL168W	MMR1	Q06324	491 aa		11.26	□□□□□ -0.61
SFA1	YDL168W	MSC6	Q08818	692 aa	Known RBP	11.26	□□□□□ -0.61
SFA1	YDL168W	APC11	Q12157	165 aa		11.26	□□□□□ -0.61
SFA1	YDL168W	ESS1	P22696	170 aa		11.25	□□□□□ -0.61
SFA1	YDL168W	ISW1	P38144	1129 aa		11.25	□□□□□ -0.61
SFA1	YDL168W	DIP5	P53388	608 aa		11.25	□□□□□ -0.61
SFA1	YDL168W	FAR11	P53917	953 aa		11.25	□□□□□ -0.61
SFA1	YDL168W	MFM1	Q02783	413 aa		11.25	□□□□□ -0.61
SFA1	YDL168W	TY1B-A	O13527	1196 aa	Known RBP	11.24	□□□□□ -0.61
SFA1	YDL168W	KEX1	P09620	729 aa		11.24	□□□□□ -0.61
SFA1	YDL168W	ELM1	P32801	640 aa		11.24	□□□□□ -0.61
SFA1	YDL168W	RGT1	P32862	1170 aa		11.24	□□□□□ -0.61
SFA1	YDL168W	MXR1	P40029	184 aa		11.24	□□□□□ -0.61
SFA1	YDL168W	PSF2	P40359	213 aa		11.24	□□□□□ -0.61
SFA1	YDL168W	CCT5	P40413	562 aa	Known RBP	11.24	□□□□□ -0.61
SFA1	YDL168W	BRE5	P53741	515 aa	Known RBP	11.24	□□□□□ -0.61
SFA1	YDL168W	ADY4	Q05955	493 aa		11.24	□□□□□ -0.61
SFA1	YDL168W	MET7	Q08645	548 aa		11.24	□□□□□ -0.61
SFA1	YDL168W	ECM29	P38737	1868 aa		11.23	□□□□□ -0.61
SFA1	YDL168W	MCM3	P24279	971 aa	Known RBP	11.23	□□□□□ -0.61
SFA1	YDL168W	TFC4	P33339	1025 aa		11.23	□□□□□ -0.61
SFA1	YDL168W	DID4	P36108	232 aa		11.23	□□□□□ -0.61
SFA1	YDL168W	RFT1	P38206	574 aa	Predicted RBP	11.23	□□□□□ -0.61
SFA1	YDL168W	GPD2	P41911	440 aa	Known RBP	11.23	□□□□□ -0.61
SFA1	YDL168W	UBP15	P50101	1230 aa		11.23	□□□□□ -0.61
SFA1	YDL168W	RTC4	P53850	401 aa		11.23	□□□□□ -0.61
SFA1	YDL168W	FKS1	P38631	1876 aa	Known RBP	11.23	□□□□□ -0.61
SFA1	YDL168W	SEC8	P32855	1065 aa		11.22	□□□□□ -0.61
SFA1	YDL168W	PET10	P36139	283 aa		11.22	□□□□□ -0.61
SFA1	YDL168W	ULP2	P40537	1034 aa	Predicted RBP	11.22	□□□□□ -0.61
SFA1	YDL168W	UBA2	P52488	636 aa		11.22	□□□□□ -0.61
SFA1	YDL168W	CUE3	P53137	624 aa	Known RBP	11.22	□□□□□ -0.61
SFA1	YDL168W	VMS1	Q04311	632 aa	Known RBP	11.22	□□□□□ -0.61
SFA1	YDL168W	COG8	Q04632	607 aa		11.22	□□□□□ -0.61
SFA1	YDL168W	TRM11	Q12463	433 aa		11.22	□□□□□ -0.61
SFA1	YDL168W	DDP1	Q99321	188 aa	Known RBP	11.22	□□□□□ -0.61
SFA1	YDL168W	HIS4	P00815	799 aa	Known RBP	11.21	□□□□□ -0.61
SFA1	YDL168W	SUP45	P12385	437 aa	Known RBP	11.21	□□□□□ -0.61
SFA1	YDL168W	CLB5	P30283	435 aa		11.21	□□□□□ -0.61
SFA1	YDL168W	BCS1	P32839	456 aa		11.21	□□□□□ -0.61
SFA1	YDL168W	DAK2	P43550	591 aa		11.21	□□□□□ -0.61
SFA1	YDL168W	CBK1	P53894	756 aa		11.21	□□□□□ -0.61
SFA1	YDL168W	PGA2	P53903	129 aa		11.21	□□□□□ -0.61
SFA1	YDL168W	ULP1	Q02724	621 aa		11.21	□□□□□ -0.61
SFA1	YDL168W	YLH47	Q06493	454 aa		11.21	□□□□□ -0.61
SFA1	YDL168W	PSR2	Q07949	397 aa		11.21	□□□□□ -0.61
SFA1	YDL168W	ICL2	Q12031	575 aa		11.21	□□□□□ -0.61
SFA1	YDL168W	SMC6	Q12749	1114 aa		11.21	□□□□□ -0.61
SFA1	YDL168W	PGK1	P00560	416 aa	Known RBP	11.2	□□□□□ -0.62
SFA1	YDL168W	GPA1	P08539	472 aa		11.2	□□□□□ -0.62
SFA1	YDL168W	YEL076C-A	P0CX16	216 aa		11.2	□□□□□ -0.62
SFA1	YDL168W	YLR464W	P0CX17	216 aa		11.2	□□□□□ -0.62
SFA1	YDL168W	PGM1	P33401	570 aa	Known RBP	11.2	□□□□□ -0.62
SFA1	YDL168W	RVS167	P39743	482 aa	Known RBP	11.2	□□□□□ -0.62
SFA1	YDL168W	YER130C	P39959	443 aa		11.2	□□□□□ -0.62
SFA1	YDL168W	YEL076C	P39971	216 aa		11.2	□□□□□ -0.62
SFA1	YDL168W	RPS7B	P48164	190 aa	Known RBP	11.2	□□□□□ -0.62
SFA1	YDL168W	EAF7	P53911	425 aa	Known RBP	11.2	□□□□□ -0.62
SFA1	YDL168W	PHM6	Q05637	104 aa		11.2	□□□□□ -0.62
SFA1	YDL168W	CRD1	Q07560	283 aa		11.2	□□□□□ -0.62
SFA1	YDL168W	CLN3	P13365	580 aa		11.19	□□□□□ -0.62
SFA1	YDL168W	DBP1	P24784	617 aa	Known RBP	11.19	□□□□□ -0.62
SFA1	YDL168W	BMH1	P29311	267 aa	Known RBP	11.19	□□□□□ -0.62
SFA1	YDL168W	SUV3	P32580	737 aa		11.19	□□□□□ -0.62
SFA1	YDL168W	PIH1	P38768	344 aa		11.19	□□□□□ -0.62
SFA1	YDL168W	THI6	P41835	540 aa		11.19	□□□□□ -0.62
SFA1	YDL168W	YPT11	P48559	417 aa		11.19	□□□□□ -0.62
SFA1	YDL168W	CNM67	P53865	581 aa	Known RBP	11.19	□□□□□ -0.62
SFA1	YDL168W	NCR1	Q12200	1170 aa		11.19	□□□□□ -0.62
SFA1	YDL168W	SUT2	Q12286	268 aa		11.19	□□□□□ -0.62
SFA1	YDL168W	POX1	P13711	748 aa		11.18	□□□□□ -0.62
SFA1	YDL168W	ROX1	P25042	368 aa		11.18	□□□□□ -0.62
SFA1	YDL168W	CDC15	P27636	974 aa		11.18	□□□□□ -0.62
SFA1	YDL168W	FLR1	P38124	548 aa		11.18	□□□□□ -0.62
SFA1	YDL168W	AFG3	P39925	761 aa		11.18	□□□□□ -0.62
SFA1	YDL168W	VPS53	P47061	822 aa		11.18	□□□□□ -0.62
SFA1	YDL168W	HUL5	P53119	910 aa		11.18	□□□□□ -0.62
SFA1	YDL168W	AIM44	Q99299	758 aa		11.18	□□□□□ -0.62
SFA1	YDL168W	TRS33	Q99394	268 aa		11.18	□□□□□ -0.62
SFA1	YDL168W	PDC1	P06169	563 aa	Known RBP	11.17	□□□□□ -0.62
SFA1	YDL168W	ZPR1	P53303	486 aa	Known RBP	11.17	□□□□□ -0.62
SFA1	YDL168W	KRE33	P53914	1056 aa	Known RBP	11.17	□□□□□ -0.62
SFA1	YDL168W	SVF1	Q05515	481 aa		11.17	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms