RNA–Protein interactions for RNA: ENST00000641578.1

CASC19-240, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,061 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-240ENST00000641578 KLF16Q9BXK1 252 aaPredicted RBP11.26□□□□□ -0.61
CASC19-240ENST00000641578 MLH3Q9UHC1 1453 aa11.25□□□□□ -0.61
CASC19-240ENST00000641578 ATP7AQ04656 1500 aa11.25□□□□□ -0.61
CASC19-240ENST00000641578 C3P01024 1663 aa11.25□□□□□ -0.61
CASC19-240ENST00000641578 IRF6O14896 467 aa11.25□□□□□ -0.61
CASC19-240ENST00000641578 WDR4P57081 412 aaKnown RBP11.25□□□□□ -0.61
CASC19-240ENST00000641578 NEUROD1Q13562 356 aa11.25□□□□□ -0.61
CASC19-240ENST00000641578 NUP155O75694 1391 aa11.25□□□□□ -0.61
CASC19-240ENST00000641578 TONSLQ96HA7 1378 aa11.25□□□□□ -0.61
CASC19-240ENST00000641578 SIGLEC1Q9BZZ2 1709 aa11.24□□□□□ -0.61
CASC19-240ENST00000641578 PLEKHG3A1L390 1219 aa11.24□□□□□ -0.61
CASC19-240ENST00000641578 ADH1CP00326 375 aa11.24□□□□□ -0.61
CASC19-240ENST00000641578 CCNYL3P0C7X3 344 aa11.24□□□□□ -0.61
CASC19-240ENST00000641578 ZMYM3Q14202 1370 aa11.24□□□□□ -0.61
CASC19-240ENST00000641578 RPRD2Q5VT52 1461 aaKnown RBP11.24□□□□□ -0.61
CASC19-240ENST00000641578 CPS1P31327 1500 aa11.24□□□□□ -0.61
CASC19-240ENST00000641578 KDM5CP41229 1560 aa11.24□□□□□ -0.61
CASC19-240ENST00000641578 PPFIA3O75145 1194 aa11.23□□□□□ -0.61
CASC19-240ENST00000641578 PPP1R15AO75807 674 aaPredicted RBP11.23□□□□□ -0.61
CASC19-240ENST00000641578 LINC01559Q495D7 138 aa11.23□□□□□ -0.61
CASC19-240ENST00000641578 BAP1Q92560 729 aa11.23□□□□□ -0.61
CASC19-240ENST00000641578 UNC93B1Q9H1C4 597 aa11.23□□□□□ -0.61
CASC19-240ENST00000641578 IQGAP3Q86VI3 1631 aa11.23□□□□□ -0.61
CASC19-240ENST00000641578 VARSP26640 1264 aaKnown RBP11.22□□□□□ -0.61
CASC19-240ENST00000641578 FAM135AQ9P2D6 1515 aa11.22□□□□□ -0.61
CASC19-240ENST00000641578 EIF2AK4Q9P2K8 1649 aaKnown RBP11.22□□□□□ -0.61
CASC19-240ENST00000641578 MINK1Q8N4C8 1332 aaPredicted RBP11.21□□□□□ -0.61
CASC19-240ENST00000641578 MS4A1P11836 297 aa11.21□□□□□ -0.61
CASC19-240ENST00000641578 ADAMTS8Q9UP79 889 aa11.21□□□□□ -0.61
CASC19-240ENST00000641578 DEPDC5O75140 1603 aa11.2□□□□□ -0.62
CASC19-240ENST00000641578 MAN1A2O60476 641 aa11.2□□□□□ -0.62
CASC19-240ENST00000641578 MDM2Q00987 491 aaPredicted RBP11.2□□□□□ -0.62
CASC19-240ENST00000641578 KRT76Q01546 638 aa11.2□□□□□ -0.62
CASC19-240ENST00000641578 EVA1BQ9NVM1 165 aa11.2□□□□□ -0.62
CASC19-240ENST00000641578 KIDINS220Q9ULH0 1771 aa11.2□□□□□ -0.62
CASC19-240ENST00000641578 RNF225M0QZC1 329 aaPredicted RBP11.19□□□□□ -0.62
CASC19-240ENST00000641578 ANKLE2Q86XL3 938 aa11.19□□□□□ -0.62
CASC19-240ENST00000641578 ZNF511Q8NB15 262 aa11.19□□□□□ -0.62
CASC19-240ENST00000641578 DIP2CQ9Y2E4 1556 aa11.19□□□□□ -0.62
CASC19-240ENST00000641578 DHX29Q7Z478 1369 aaKnown RBP11.18□□□□□ -0.62
CASC19-240ENST00000641578 MROH2AA6NES4 1674 aa11.18□□□□□ -0.62
CASC19-240ENST00000641578 PTPRNQ16849 979 aa11.17□□□□□ -0.62
CASC19-240ENST00000641578 PCDHGC3Q9UN70 934 aa11.17□□□□□ -0.62
CASC19-240ENST00000641578 VWDEQ8N2E2 1590 aa11.16□□□□□ -0.62
CASC19-240ENST00000641578 C6orf118Q5T5N4 469 aa11.16□□□□□ -0.62
CASC19-240ENST00000641578 THEMISQ8N1K5 641 aaPredicted RBP11.16□□□□□ -0.62
CASC19-240ENST00000641578 GPR161Q8N6U8 529 aaKnown RBP11.16□□□□□ -0.62
CASC19-240ENST00000641578 A2MP01023 1474 aa11.15□□□□□ -0.62
CASC19-240ENST00000641578 KCNH2Q12809 1159 aa11.15□□□□□ -0.62
CASC19-240ENST00000641578 ZFAND3Q9H8U3 227 aa11.15□□□□□ -0.62
CASC19-240ENST00000641578 PRDM15P57071 1507 aaPredicted RBP11.14□□□□□ -0.63
CASC19-240ENST00000641578 RNF17Q9BXT8 1623 aaKnown RBP11.14□□□□□ -0.63
CASC19-240ENST00000641578 TULP1O00294 542 aaPredicted RBP11.14□□□□□ -0.63
CASC19-240ENST00000641578 GGT6Q6P531 493 aa11.14□□□□□ -0.63
CASC19-240ENST00000641578 CEP170BQ9Y4F5 1589 aaPredicted RBP11.14□□□□□ -0.63
CASC19-240ENST00000641578 KANK1Q14678 1352 aa11.14□□□□□ -0.63
CASC19-240ENST00000641578 C6orf229H3BNL8 230 aa11.13□□□□□ -0.63
CASC19-240ENST00000641578 ZIC2O95409 532 aaPredicted RBP11.13□□□□□ -0.63
CASC19-240ENST00000641578 DIEXFQ68CQ4 756 aaKnown RBP11.13□□□□□ -0.63
CASC19-240ENST00000641578 GPAT2Q6NUI2 795 aa11.13□□□□□ -0.63
CASC19-240ENST00000641578 L3MBTL2Q969R5 705 aa11.13□□□□□ -0.63
CASC19-240ENST00000641578 CCDC102AQ96A19 550 aa11.13□□□□□ -0.63
CASC19-240ENST00000641578 ITPKCQ96DU7 683 aa11.13□□□□□ -0.63
CASC19-240ENST00000641578 CNTNAP3BQ96NU0 1288 aa11.13□□□□□ -0.63
CASC19-240ENST00000641578 CNTNAP3Q9BZ76 1288 aa11.13□□□□□ -0.63
CASC19-240ENST00000641578 GPCPD1Q9NPB8 672 aa11.13□□□□□ -0.63
CASC19-240ENST00000641578 FAM217BQ9NTX9 383 aaPredicted RBP11.13□□□□□ -0.63
CASC19-240ENST00000641578 TET3O43151 1660 aa11.13□□□□□ -0.63
CASC19-240ENST00000641578 ZNF142P52746 1687 aaPredicted RBP11.13□□□□□ -0.63
CASC19-240ENST00000641578 FDX1P10109 184 aa11.12□□□□□ -0.63
CASC19-240ENST00000641578 CLCN1P35523 988 aa11.12□□□□□ -0.63
CASC19-240ENST00000641578 LMTK2Q8IWU2 1503 aa11.12□□□□□ -0.63
CASC19-240ENST00000641578 ABCA6Q8N139 1617 aa11.12□□□□□ -0.63
CASC19-240ENST00000641578 MROH1Q8NDA8 1641 aa11.12□□□□□ -0.63
CASC19-240ENST00000641578 A2ML1A8K2U0 1454 aa11.12□□□□□ -0.63
CASC19-240ENST00000641578 NUTM1Q86Y26 1132 aa11.11□□□□□ -0.63
CASC19-240ENST00000641578 CDK15Q96Q40 435 aa11.11□□□□□ -0.63
CASC19-240ENST00000641578 DNMT3AQ9Y6K1 912 aaPredicted RBP11.11□□□□□ -0.63
CASC19-240ENST00000641578 CCDC144AA2RUR9 1427 aa11.1□□□□□ -0.63
CASC19-240ENST00000641578 KIF3BO15066 747 aa11.1□□□□□ -0.63
CASC19-240ENST00000641578 ZNF385CQ66K41 422 aaPredicted RBP11.1□□□□□ -0.63
CASC19-240ENST00000641578 DNMT3LQ9UJW3 386 aa11.1□□□□□ -0.63
CASC19-240ENST00000641578 SOS2Q07890 1332 aaPredicted RBP11.09□□□□□ -0.63
CASC19-240ENST00000641578 MYO3AQ8NEV4 1616 aa11.09□□□□□ -0.63
CASC19-240ENST00000641578 E9PCH4 1651 aa11.09□□□□□ -0.63
CASC19-240ENST00000641578 IGHA1P01876 353 aa11.09□□□□□ -0.63
CASC19-240ENST00000641578 NR3C2P08235 984 aa11.09□□□□□ -0.63
CASC19-240ENST00000641578 FAM174AQ8TBP5 190 aa11.09□□□□□ -0.63
CASC19-240ENST00000641578 BMP2P12643 396 aa11.08□□□□□ -0.64
CASC19-240ENST00000641578 XP32Q5T750 250 aa11.08□□□□□ -0.64
CASC19-240ENST00000641578 TRPM2O94759 1503 aa11.08□□□□□ -0.64
CASC19-240ENST00000641578 LINC00528Q8N1L1 170 aa11.07□□□□□ -0.64
CASC19-240ENST00000641578 EFCAB6Q5THR3 1501 aa11.07□□□□□ -0.64
CASC19-240ENST00000641578 TNRQ92752 1358 aa11.06□□□□□ -0.64
CASC19-240ENST00000641578 IRS1P35568 1242 aa11.06□□□□□ -0.64
CASC19-240ENST00000641578 COL25A1Q9BXS0 654 aaPredicted RBP11.06□□□□□ -0.64
CASC19-240ENST00000641578 NEURL4Q96JN8 1562 aa11.06□□□□□ -0.64
CASC19-240ENST00000641578 SPHKAPQ2M3C7 1700 aa11.06□□□□□ -0.64
CASC19-240ENST00000641578 NPHP4O75161 1426 aaPredicted RBP11.05□□□□□ -0.64
CASC19-240ENST00000641578 ARID5BQ14865 1188 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms