RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 RWDD1Q9H446 243 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-215ENST00000641371 PCDH11XQ9BZA7 1347 aa12.34□□□□□ -0.43
PHGDH-215ENST00000641371 PCDH11YQ9BZA8 1340 aa12.34□□□□□ -0.43
PHGDH-215ENST00000641371 MEGF6O75095 1541 aa12.33□□□□□ -0.44
PHGDH-215ENST00000641371 PLEKHG5O94827 1062 aa12.33□□□□□ -0.44
PHGDH-215ENST00000641371 ITPRIPQ8IWB1 547 aa12.33□□□□□ -0.44
PHGDH-215ENST00000641371 BTBD11A6QL63 1104 aa12.32□□□□□ -0.44
PHGDH-215ENST00000641371 IL2RBP14784 551 aa12.32□□□□□ -0.44
PHGDH-215ENST00000641371 PHKG2P15735 406 aa12.32□□□□□ -0.44
PHGDH-215ENST00000641371 PLCH1Q4KWH8 1693 aa12.32□□□□□ -0.44
PHGDH-215ENST00000641371 ELL2O00472 640 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-215ENST00000641371 RLBP1P12271 317 aa12.31□□□□□ -0.44
PHGDH-215ENST00000641371 CDCA7Q9BWT1 371 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-215ENST00000641371 PXDNLA1KZ92 1463 aa12.31□□□□□ -0.44
PHGDH-215ENST00000641371 NWD2Q9ULI1 1742 aa12.31□□□□□ -0.44
PHGDH-215ENST00000641371 N4BP2Q86UW6 1770 aaPredicted RBP12.3□□□□□ -0.44
PHGDH-215ENST00000641371 CCT4P50991 539 aaKnown RBP12.3□□□□□ -0.44
PHGDH-215ENST00000641371 EIF4A1P60842 406 aaKnown RBP12.3□□□□□ -0.44
PHGDH-215ENST00000641371 HDAC1Q13547 482 aaPredicted RBP12.3□□□□□ -0.44
PHGDH-215ENST00000641371 INTS3Q68E01 1043 aaKnown RBP12.3□□□□□ -0.44
PHGDH-215ENST00000641371 TMEM57Q8N5G2 664 aa12.3□□□□□ -0.44
PHGDH-215ENST00000641371 ZCRB1Q8TBF4 217 aaKnown RBP12.3□□□□□ -0.44
PHGDH-215ENST00000641371 MPRIPQ6WCQ1 1025 aa12.29□□□□□ -0.44
PHGDH-215ENST00000641371 SLC52A2Q9HAB3 445 aa12.29□□□□□ -0.44
PHGDH-215ENST00000641371 LGR6Q9HBX8 967 aa12.29□□□□□ -0.44
PHGDH-215ENST00000641371 ZBTB40Q9NUA8 1239 aa12.29□□□□□ -0.44
PHGDH-215ENST00000641371 THRAP3Q9Y2W1 955 aaKnown RBP12.29□□□□□ -0.44
PHGDH-215ENST00000641371 HEG1Q9ULI3 1381 aa12.29□□□□□ -0.44
PHGDH-215ENST00000641371 ERVV-2B6SEH9 535 aa12.28□□□□□ -0.44
PHGDH-215ENST00000641371 SLC4A2P04920 1241 aa12.28□□□□□ -0.44
PHGDH-215ENST00000641371 NKX1-1Q15270 411 aaPredicted RBP12.28□□□□□ -0.44
PHGDH-215ENST00000641371 HDGFL1Q5TGJ6 251 aa12.28□□□□□ -0.44
PHGDH-215ENST00000641371 KDM6AO15550 1401 aaPredicted RBP12.28□□□□□ -0.44
PHGDH-215ENST00000641371 MIS18AQ9NYP9 233 aa12.27□□□□□ -0.45
PHGDH-215ENST00000641371 WNK3Q9BYP7 1800 aa12.26□□□□□ -0.45
PHGDH-215ENST00000641371 TTC5Q8N0Z6 440 aa12.26□□□□□ -0.45
PHGDH-215ENST00000641371 BTG4Q9NY30 223 aa12.26□□□□□ -0.45
PHGDH-215ENST00000641371 DBF4Q9UBU7 674 aaPredicted RBP12.26□□□□□ -0.45
PHGDH-215ENST00000641371 HDAC5Q9UQL6 1122 aa12.26□□□□□ -0.45
PHGDH-215ENST00000641371 JCADQ9P266 1359 aa12.26□□□□□ -0.45
PHGDH-215ENST00000641371 LRP6O75581 1613 aa12.26□□□□□ -0.45
PHGDH-215ENST00000641371 UBAP1LF5GYI3 381 aa12.25□□□□□ -0.45
PHGDH-215ENST00000641371 ZBTB7BO15156 539 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-215ENST00000641371 CYP27B1O15528 508 aa12.25□□□□□ -0.45
PHGDH-215ENST00000641371 CABP4P57796 275 aa12.25□□□□□ -0.45
PHGDH-215ENST00000641371 FLIIQ13045 1269 aa12.25□□□□□ -0.45
PHGDH-215ENST00000641371 KRT24Q2M2I5 525 aa12.25□□□□□ -0.45
PHGDH-215ENST00000641371 ZNF790Q6PG37 636 aa12.25□□□□□ -0.45
PHGDH-215ENST00000641371 LARP1Q6PKG0 1096 aaKnown RBP12.25□□□□□ -0.45
PHGDH-215ENST00000641371 STRN4Q9NRL3 753 aa12.25□□□□□ -0.45
PHGDH-215ENST00000641371 IBTKQ9P2D0 1353 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-215ENST00000641371 DISP2A7MBM2 1401 aa12.25□□□□□ -0.45
PHGDH-215ENST00000641371 RGS12O14924 1447 aa12.25□□□□□ -0.45
PHGDH-215ENST00000641371 NRAPQ86VF7 1730 aa12.25□□□□□ -0.45
PHGDH-215ENST00000641371 GIGYF1O75420 1035 aaPredicted RBP12.24□□□□□ -0.45
PHGDH-215ENST00000641371 ERBB4Q15303 1308 aa12.24□□□□□ -0.45
PHGDH-215ENST00000641371 GCC1Q96CN9 775 aa12.24□□□□□ -0.45
PHGDH-215ENST00000641371 FMNL2Q96PY5 1086 aa12.24□□□□□ -0.45
PHGDH-215ENST00000641371 SHANK3Q9BYB0 1731 aa12.24□□□□□ -0.45
PHGDH-215ENST00000641371 TSHZ2Q9NRE2 1034 aa12.24□□□□□ -0.45
PHGDH-215ENST00000641371 HYPKQ9NX55 129 aa12.24□□□□□ -0.45
PHGDH-215ENST00000641371 TNNQ9UQP3 1299 aa12.24□□□□□ -0.45
PHGDH-215ENST00000641371 LAMB4A4D0S4 1761 aa12.23□□□□□ -0.45
PHGDH-215ENST00000641371 SPATA31A6Q5VVP1 1343 aa12.23□□□□□ -0.45
PHGDH-215ENST00000641371 DDX58O95786 925 aaKnown RBP12.23□□□□□ -0.45
PHGDH-215ENST00000641371 GNAI3P08754 354 aa12.23□□□□□ -0.45
PHGDH-215ENST00000641371 FKBP5Q13451 457 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-215ENST00000641371 RPAP2Q8IXW5 612 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-215ENST00000641371 PCDHB15Q9Y5E8 787 aa12.23□□□□□ -0.45
PHGDH-215ENST00000641371 SNRPA1P09661 255 aaKnown RBP12.22□□□□□ -0.45
PHGDH-215ENST00000641371 SMC5Q8IY18 1101 aa12.22□□□□□ -0.45
PHGDH-215ENST00000641371 PAPPAQ13219 1627 aa12.22□□□□□ -0.45
PHGDH-215ENST00000641371 TNS2Q63HR2 1409 aa12.21□□□□□ -0.45
PHGDH-215ENST00000641371 ATP10DQ9P241 1426 aa12.21□□□□□ -0.45
PHGDH-215ENST00000641371 UBR2Q8IWV8 1755 aa12.21□□□□□ -0.45
PHGDH-215ENST00000641371 HMMRO75330 724 aa12.21□□□□□ -0.45
PHGDH-215ENST00000641371 IGHDP01880 384 aa12.21□□□□□ -0.45
PHGDH-215ENST00000641371 PIP4K2BP78356 416 aa12.21□□□□□ -0.45
PHGDH-215ENST00000641371 DDX21Q9NR30 783 aaKnown RBP eCLIP12.21□□□□□ -0.45
PHGDH-215ENST00000641371 SLIT2O94813 1529 aa12.21□□□□□ -0.46
PHGDH-215ENST00000641371 EXOC5O00471 708 aa12.2□□□□□ -0.46
PHGDH-215ENST00000641371 NFATC2IPQ8NCF5 419 aa12.2□□□□□ -0.46
PHGDH-215ENST00000641371 EIF2S2P20042 333 aaKnown RBP12.19□□□□□ -0.46
PHGDH-215ENST00000641371 BARGINQ6ZT62 677 aa12.19□□□□□ -0.46
PHGDH-215ENST00000641371 TEX13AQ9BXU3 409 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-215ENST00000641371 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.19□□□□□ -0.46
PHGDH-215ENST00000641371 SPATA31A1Q5TZJ5 1347 aa12.18□□□□□ -0.46
PHGDH-215ENST00000641371 EIF5BO60841 1220 aaKnown RBP12.18□□□□□ -0.46
PHGDH-215ENST00000641371 ALDH1L1O75891 902 aa12.18□□□□□ -0.46
PHGDH-215ENST00000641371 GNAI2P04899 355 aa12.18□□□□□ -0.46
PHGDH-215ENST00000641371 ANKRD44Q8N8A2 993 aa12.18□□□□□ -0.46
PHGDH-215ENST00000641371 DNAAF4Q8WXU2 420 aa12.18□□□□□ -0.46
PHGDH-215ENST00000641371 CHPF2Q9P2E5 772 aa12.18□□□□□ -0.46
PHGDH-215ENST00000641371 ZBTB47Q9UFB7 747 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-215ENST00000641371 KCNQ3O43525 872 aa12.17□□□□□ -0.46
PHGDH-215ENST00000641371 SLC4A10Q6U841 1118 aa12.17□□□□□ -0.46
PHGDH-215ENST00000641371 G2E3Q7L622 706 aa12.17□□□□□ -0.46
PHGDH-215ENST00000641371 VSIG10Q8N0Z9 540 aa12.17□□□□□ -0.46
PHGDH-215ENST00000641371 SRCIN1Q9C0H9 1055 aa12.17□□□□□ -0.46
PHGDH-215ENST00000641371 TMOD3Q9NYL9 352 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms