RNA–Protein interactions for RNA: ENST00000639956.1

SPIN3-232, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,998 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-232ENST00000639956 IL17REQ8NFR9 667 aa15.26■□□□□ 0.03
SPIN3-232ENST00000639956 DDX54Q8TDD1 881 aaKnown RBP15.26■□□□□ 0.03
SPIN3-232ENST00000639956 TMX3Q96JJ7 454 aa15.26■□□□□ 0.03
SPIN3-232ENST00000639956 CRB1P82279 1406 aa15.25■□□□□ 0.03
SPIN3-232ENST00000639956 PRIM1P49642 420 aaKnown RBP15.25■□□□□ 0.03
SPIN3-232ENST00000639956 CCT4P50991 539 aaKnown RBP15.25■□□□□ 0.03
SPIN3-232ENST00000639956 NUCB2P80303 420 aa15.25■□□□□ 0.03
SPIN3-232ENST00000639956 KLHL40Q2TBA0 621 aa15.25■□□□□ 0.03
SPIN3-232ENST00000639956 ZSCAN23Q3MJ62 389 aa15.25■□□□□ 0.03
SPIN3-232ENST00000639956 ANP32BQ92688 251 aaKnown RBP15.25■□□□□ 0.03
SPIN3-232ENST00000639956 RIMS1Q86UR5 1692 aaKnown RBP15.25■□□□□ 0.03
SPIN3-232ENST00000639956 USP6P35125 1406 aa15.25■□□□□ 0.03
SPIN3-232ENST00000639956 SYCE3A1L190 88 aa15.24■□□□□ 0.03
SPIN3-232ENST00000639956 PLEKHG3A1L390 1219 aa15.24■□□□□ 0.03
SPIN3-232ENST00000639956 SURF6O75683 361 aaKnown RBP15.24■□□□□ 0.03
SPIN3-232ENST00000639956 LMOD2Q6P5Q4 547 aa15.24■□□□□ 0.03
SPIN3-232ENST00000639956 GPT2Q8TD30 523 aa15.24■□□□□ 0.03
SPIN3-232ENST00000639956 HDGFL1Q5TGJ6 251 aa15.24■□□□□ 0.03
SPIN3-232ENST00000639956 RBSNQ9H1K0 784 aa15.24■□□□□ 0.03
SPIN3-232ENST00000639956 PPP6R1Q9UPN7 881 aa15.24■□□□□ 0.03
SPIN3-232ENST00000639956 EID1Q9Y6B2 187 aa15.24■□□□□ 0.03
SPIN3-232ENST00000639956 GNAT3A8MTJ3 354 aa15.24■□□□□ 0.03
SPIN3-232ENST00000639956 KCNQ3O43525 872 aa15.24■□□□□ 0.03
SPIN3-232ENST00000639956 XPCQ01831 940 aaPredicted RBP15.24■□□□□ 0.03
SPIN3-232ENST00000639956 CCDC30Q5VVM6 783 aa15.23■□□□□ 0.03
SPIN3-232ENST00000639956 ESYT1Q9BSJ8 1104 aa15.23■□□□□ 0.03
SPIN3-232ENST00000639956 UBTFL1P0CB47 393 aaPredicted RBP15.23■□□□□ 0.03
SPIN3-232ENST00000639956 NRXN3Q9Y4C0 1643 aa15.23■□□□□ 0.03
SPIN3-232ENST00000639956 KIAA0232Q92628 1395 aa15.22■□□□□ 0.03
SPIN3-232ENST00000639956 LGR6Q9HBX8 967 aa15.22■□□□□ 0.03
SPIN3-232ENST00000639956 SETD1BQ9UPS6 1966 aaKnown RBP15.22■□□□□ 0.03
SPIN3-232ENST00000639956 CPA1P15085 419 aa15.22■□□□□ 0.03
SPIN3-232ENST00000639956 USP44Q9H0E7 712 aa15.21■□□□□ 0.03
SPIN3-232ENST00000639956 OVOS2A0A0J9YW53 1432 aa15.21■□□□□ 0.03
SPIN3-232ENST00000639956 OVOS2Q6IE36 1432 aa15.21■□□□□ 0.03
SPIN3-232ENST00000639956 CHMLP26374 656 aa15.21■□□□□ 0.03
SPIN3-232ENST00000639956 PPP1R42Q7Z4L9 355 aa15.21■□□□□ 0.03
SPIN3-232ENST00000639956 TMEM63CQ9P1W3 806 aa15.21■□□□□ 0.03
SPIN3-232ENST00000639956 SPATA31D1Q6ZQQ2 1576 aa15.21■□□□□ 0.03
SPIN3-232ENST00000639956 ADAMTS13Q76LX8 1427 aa15.21■□□□□ 0.03
SPIN3-232ENST00000639956 NBPF7P0C2Y1 421 aaPredicted RBP15.21■□□□□ 0.02
SPIN3-232ENST00000639956 HOXC9P31274 260 aa15.21■□□□□ 0.02
SPIN3-232ENST00000639956 PTPRUQ92729 1446 aa15.2■□□□□ 0.02
SPIN3-232ENST00000639956 ATP8B2P98198 1209 aa15.2■□□□□ 0.02
SPIN3-232ENST00000639956 OS9Q13438 667 aaPredicted RBP15.2■□□□□ 0.02
SPIN3-232ENST00000639956 FLT4P35916 1363 aa15.2■□□□□ 0.02
SPIN3-232ENST00000639956 SRGAP3O43295 1099 aa15.2■□□□□ 0.02
SPIN3-232ENST00000639956 GNAI3P08754 354 aa15.2■□□□□ 0.02
SPIN3-232ENST00000639956 KCNA6P17658 529 aa15.2■□□□□ 0.02
SPIN3-232ENST00000639956 LRRC59Q96AG4 307 aaKnown RBP15.2■□□□□ 0.02
SPIN3-232ENST00000639956 CEP170BQ9Y4F5 1589 aaPredicted RBP15.2■□□□□ 0.02
SPIN3-232ENST00000639956 CYP2E1P05181 493 aaPredicted RBP15.19■□□□□ 0.02
SPIN3-232ENST00000639956 SPG7Q9UQ90 795 aa15.19■□□□□ 0.02
SPIN3-232ENST00000639956 KIF24Q5T7B8 1368 aa15.19■□□□□ 0.02
SPIN3-232ENST00000639956 TAF7Q15545 349 aaPredicted RBP15.19■□□□□ 0.02
SPIN3-232ENST00000639956 SETD1AO15047 1707 aaKnown RBP15.19■□□□□ 0.02
SPIN3-232ENST00000639956 CWC27Q6UX04 472 aaKnown RBP15.18■□□□□ 0.02
SPIN3-232ENST00000639956 MPRIPQ6WCQ1 1025 aa15.18■□□□□ 0.02
SPIN3-232ENST00000639956 CHPF2Q9P2E5 772 aa15.18■□□□□ 0.02
SPIN3-232ENST00000639956 PI4KAP2A4QPH2 592 aa15.18■□□□□ 0.02
SPIN3-232ENST00000639956 PI4KAP1Q8N8J0 262 aa15.18■□□□□ 0.02
SPIN3-232ENST00000639956 PEAK1Q9H792 1746 aa15.18■□□□□ 0.02
SPIN3-232ENST00000639956 MCCP23508 829 aa15.18■□□□□ 0.02
SPIN3-232ENST00000639956 IGSF1Q8N6C5 1336 aa15.17■□□□□ 0.02
SPIN3-232ENST00000639956 SIRT1Q96EB6 747 aa15.17■□□□□ 0.02
SPIN3-232ENST00000639956 CWC22Q9HCG8 908 aaKnown RBP15.17■□□□□ 0.02
SPIN3-232ENST00000639956 GADD45BO75293 160 aaPredicted RBP15.17■□□□□ 0.02
SPIN3-232ENST00000639956 PTMSP20962 102 aa15.17■□□□□ 0.02
SPIN3-232ENST00000639956 ARID3AQ99856 593 aa15.17■□□□□ 0.02
SPIN3-232ENST00000639956 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.17■□□□□ 0.02
SPIN3-232ENST00000639956 SBNO1A3KN83 1393 aa15.16■□□□□ 0.02
SPIN3-232ENST00000639956 DIP2BQ9P265 1576 aa15.16■□□□□ 0.02
SPIN3-232ENST00000639956 MSNP26038 577 aaKnown RBP15.16■□□□□ 0.02
SPIN3-232ENST00000639956 CCDC173Q0VFZ6 552 aa15.16■□□□□ 0.02
SPIN3-232ENST00000639956 C3P01024 1663 aa15.16■□□□□ 0.02
SPIN3-232ENST00000639956 PRAMEF22A3QJZ6 481 aa15.16■□□□□ 0.02
SPIN3-232ENST00000639956 PA2G4Q9UQ80 394 aaKnown RBP15.16■□□□□ 0.02
SPIN3-232ENST00000639956 SOS1Q07889 1333 aaPredicted RBP15.16■□□□□ 0.02
SPIN3-232ENST00000639956 AIMP1Q12904 312 aaKnown RBP15.15■□□□□ 0.02
SPIN3-232ENST00000639956 ISY1Q9ULR0 285 aaKnown RBP15.15■□□□□ 0.02
SPIN3-232ENST00000639956 NBPF6Q5VWK0 638 aa15.15■□□□□ 0.02
SPIN3-232ENST00000639956 NBPF4Q96M43 638 aa15.15■□□□□ 0.02
SPIN3-232ENST00000639956 SRCIN1Q9C0H9 1055 aa15.15■□□□□ 0.02
SPIN3-232ENST00000639956 OSBPL3Q9H4L5 887 aa15.15■□□□□ 0.02
SPIN3-232ENST00000639956 ARHGEF10O15013 1369 aa15.15■□□□□ 0.02
SPIN3-232ENST00000639956 ITSN1Q15811 1721 aa15.14■□□□□ 0.01
SPIN3-232ENST00000639956 MON2Q7Z3U7 1717 aa15.14■□□□□ 0.01
SPIN3-232ENST00000639956 RHPN1Q8TCX5 695 aa15.14■□□□□ 0.01
SPIN3-232ENST00000639956 PLCB2Q00722 1185 aa15.14■□□□□ 0.01
SPIN3-232ENST00000639956 USP31Q70CQ4 1352 aa15.14■□□□□ 0.01
SPIN3-232ENST00000639956 TECPR2O15040 1411 aa15.14■□□□□ 0.01
SPIN3-232ENST00000639956 IBTKQ9P2D0 1353 aaPredicted RBP15.13■□□□□ 0.01
SPIN3-232ENST00000639956 CLEC17AQ6ZS10 378 aa15.13■□□□□ 0.01
SPIN3-232ENST00000639956 KIAA1211Q6ZU35 1233 aa15.13■□□□□ 0.01
SPIN3-232ENST00000639956 RASEFQ8IZ41 740 aa15.13■□□□□ 0.01
SPIN3-232ENST00000639956 JARID2Q92833 1246 aaPredicted RBP15.13■□□□□ 0.01
SPIN3-232ENST00000639956 SALL3Q9BXA9 1300 aa15.13■□□□□ 0.01
SPIN3-232ENST00000639956 AGLP35573 1532 aa15.12■□□□□ 0.01
SPIN3-232ENST00000639956 CWF19L2Q2TBE0 894 aaKnown RBP15.12■□□□□ 0.01
SPIN3-232ENST00000639956 TTC21AQ8NDW8 1320 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms