RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 TUBGCP6Q96RT7 1819 aa29.02■■■□□ 2.24
SCN1B-206ENST00000638536 GNAT3A8MTJ3 354 aa29.02■■■□□ 2.24
SCN1B-206ENST00000638536 AKT1S1Q96B36 256 aa29.02■■■□□ 2.24
SCN1B-206ENST00000638536 SLC52A2Q9HAB3 445 aa29.02■■■□□ 2.24
SCN1B-206ENST00000638536 C5P01031 1676 aa29.01■■■□□ 2.24
SCN1B-206ENST00000638536 DLG5Q8TDM6 1919 aa29.01■■■□□ 2.24
SCN1B-206ENST00000638536 CCDC184Q52MB2 194 aa29.01■■■□□ 2.23
SCN1B-206ENST00000638536 SLC4A9Q96Q91 983 aa29■■■□□ 2.23
SCN1B-206ENST00000638536 MRC1P22897 1456 aa28.99■■■□□ 2.23
SCN1B-206ENST00000638536 LOC102724428A0A0B4J2F2 783 aa28.99■■■□□ 2.23
SCN1B-206ENST00000638536 SIK1P57059 783 aa28.99■■■□□ 2.23
SCN1B-206ENST00000638536 CASZ1Q86V15 1759 aa28.99■■■□□ 2.23
SCN1B-206ENST00000638536 ITPK1Q13572 414 aa28.97■■■□□ 2.23
SCN1B-206ENST00000638536 SIPA1L3O60292 1781 aaPredicted RBP28.96■■■□□ 2.23
SCN1B-206ENST00000638536 SLC39A6Q13433 755 aa28.95■■■□□ 2.23
SCN1B-206ENST00000638536 DCTN1Q14203 1278 aa28.94■■■□□ 2.22
SCN1B-206ENST00000638536 RBM42Q9BTD8 480 aaKnown RBP28.94■■■□□ 2.22
SCN1B-206ENST00000638536 ATP6V1AP38606 617 aa28.94■■■□□ 2.22
SCN1B-206ENST00000638536 LINC00116Q8NCU8 138 aa28.94■■■□□ 2.22
SCN1B-206ENST00000638536 CEMIPQ8WUJ3 1361 aa28.93■■■□□ 2.22
SCN1B-206ENST00000638536 PTCD1O75127 700 aaKnown RBP28.93■■■□□ 2.22
SCN1B-206ENST00000638536 MCM10Q7L590 875 aa28.93■■■□□ 2.22
SCN1B-206ENST00000638536 ADAMTS8Q9UP79 889 aa28.93■■■□□ 2.22
SCN1B-206ENST00000638536 C4BP0C0L5 1744 aa28.93■■■□□ 2.22
SCN1B-206ENST00000638536 AMIGO3Q86WK7 504 aa28.91■■■□□ 2.22
SCN1B-206ENST00000638536 CCDC146Q8IYE0 955 aa28.91■■■□□ 2.22
SCN1B-206ENST00000638536 QSER1Q2KHR3 1735 aa28.91■■■□□ 2.22
SCN1B-206ENST00000638536 PNPLA7Q6ZV29 1317 aa28.91■■■□□ 2.22
SCN1B-206ENST00000638536 ANP32CO43423 234 aa28.91■■■□□ 2.22
SCN1B-206ENST00000638536 SMIM5Q71RC9 77 aa28.91■■■□□ 2.22
SCN1B-206ENST00000638536 TFCP2L1Q9NZI6 479 aa28.91■■■□□ 2.22
SCN1B-206ENST00000638536 WDR43Q15061 677 aaKnown RBP eCLIP28.89■■■□□ 2.22
SCN1B-206ENST00000638536 ZNF831Q5JPB2 1677 aa28.88■■■□□ 2.21
SCN1B-206ENST00000638536 MYH14Q7Z406 1995 aaKnown RBP28.88■■■□□ 2.21
SCN1B-206ENST00000638536 TEFQ10587 303 aa28.88■■■□□ 2.21
SCN1B-206ENST00000638536 UBR3Q6ZT12 1888 aa28.88■■■□□ 2.21
SCN1B-206ENST00000638536 COL5A3P25940 1745 aaPredicted RBP28.87■■■□□ 2.21
SCN1B-206ENST00000638536 ZBTB7AO95365 584 aa28.87■■■□□ 2.21
SCN1B-206ENST00000638536 NFE2L2Q16236 605 aa28.87■■■□□ 2.21
SCN1B-206ENST00000638536 LRP5O75197 1615 aa28.87■■■□□ 2.21
SCN1B-206ENST00000638536 NEFMP07197 916 aa28.87■■■□□ 2.21
SCN1B-206ENST00000638536 PNNQ9H307 717 aaKnown RBP28.87■■■□□ 2.21
SCN1B-206ENST00000638536 MAPK8IP3Q9UPT6 1336 aa28.86■■■□□ 2.21
SCN1B-206ENST00000638536 KCPQ6ZWJ8 1503 aa28.86■■■□□ 2.21
SCN1B-206ENST00000638536 TJP1Q07157 1748 aa28.86■■■□□ 2.21
SCN1B-206ENST00000638536 UBR2Q8IWV8 1755 aa28.86■■■□□ 2.21
SCN1B-206ENST00000638536 RTF1Q92541 710 aaKnown RBP28.86■■■□□ 2.21
SCN1B-206ENST00000638536 KCNQ3O43525 872 aa28.83■■■□□ 2.21
SCN1B-206ENST00000638536 HTATSF1O43719 755 aaKnown RBP28.83■■■□□ 2.21
SCN1B-206ENST00000638536 THUMPD2Q9BTF0 503 aaKnown RBP28.83■■■□□ 2.21
SCN1B-206ENST00000638536 COL23A1Q86Y22 540 aaPredicted RBP28.83■■■□□ 2.21
SCN1B-206ENST00000638536 ATF5Q9Y2D1 282 aaPredicted RBP28.83■■■□□ 2.21
SCN1B-206ENST00000638536 RRP7AQ9Y3A4 280 aaKnown RBP28.83■■■□□ 2.21
SCN1B-206ENST00000638536 TMPOP42166 694 aaKnown RBP28.81■■■□□ 2.2
SCN1B-206ENST00000638536 AK7Q96M32 723 aa28.81■■■□□ 2.2
SCN1B-206ENST00000638536 ZNF790Q6PG37 636 aa28.8■■■□□ 2.2
SCN1B-206ENST00000638536 RIPK4P57078 832 aa28.8■■■□□ 2.2
SCN1B-206ENST00000638536 DNAJC10Q8IXB1 793 aa28.8■■■□□ 2.2
SCN1B-206ENST00000638536 RUNDC1Q96C34 613 aa28.8■■■□□ 2.2
SCN1B-206ENST00000638536 CICQ96RK0 1608 aaPredicted RBP28.79■■■□□ 2.2
SCN1B-206ENST00000638536 BTBD11A6QL63 1104 aa28.79■■■□□ 2.2
SCN1B-206ENST00000638536 SPON1Q9HCB6 807 aa28.79■■■□□ 2.2
SCN1B-206ENST00000638536 PHF14O94880 888 aa28.78■■■□□ 2.2
SCN1B-206ENST00000638536 ZNF496Q96IT1 587 aaPredicted RBP28.78■■■□□ 2.2
SCN1B-206ENST00000638536 MIS18AQ9NYP9 233 aa28.78■■■□□ 2.2
SCN1B-206ENST00000638536 GNPATO15228 680 aa28.77■■■□□ 2.2
SCN1B-206ENST00000638536 NEUROD2Q15784 382 aa28.77■■■□□ 2.2
SCN1B-206ENST00000638536 MRS2Q9HD23 443 aa28.77■■■□□ 2.2
SCN1B-206ENST00000638536 PTGER2P43116 358 aa28.76■■■□□ 2.2
SCN1B-206ENST00000638536 TTC5Q8N0Z6 440 aa28.76■■■□□ 2.2
SCN1B-206ENST00000638536 MTFR1LQ9H019 292 aa28.76■■■□□ 2.2
SCN1B-206ENST00000638536 MSH5O43196 834 aa28.76■■■□□ 2.19
SCN1B-206ENST00000638536 PNISRQ8TF01 805 aaKnown RBP28.76■■■□□ 2.19
SCN1B-206ENST00000638536 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.75■■■□□ 2.19
SCN1B-206ENST00000638536 CRKLP46109 303 aaKnown RBP28.75■■■□□ 2.19
SCN1B-206ENST00000638536 SGIP1Q9BQI5 828 aa28.74■■■□□ 2.19
SCN1B-206ENST00000638536 CNTNAP4Q9C0A0 1308 aa28.74■■■□□ 2.19
SCN1B-206ENST00000638536 TAF7Q15545 349 aaPredicted RBP28.73■■■□□ 2.19
SCN1B-206ENST00000638536 RC3H1Q5TC82 1133 aaKnown RBP28.73■■■□□ 2.19
SCN1B-206ENST00000638536 HMGB2P26583 209 aaKnown RBP28.72■■■□□ 2.19
SCN1B-206ENST00000638536 INTS5Q6P9B9 1019 aaKnown RBP28.72■■■□□ 2.19
SCN1B-206ENST00000638536 COL24A1Q17RW2 1714 aa28.72■■■□□ 2.19
SCN1B-206ENST00000638536 CYP19A1P11511 503 aaPredicted RBP28.72■■■□□ 2.19
SCN1B-206ENST00000638536 TRIM35Q9UPQ4 493 aa28.72■■■□□ 2.19
SCN1B-206ENST00000638536 HEG1Q9ULI3 1381 aa28.71■■■□□ 2.19
SCN1B-206ENST00000638536 SSFA2P28290 1259 aa28.71■■■□□ 2.19
SCN1B-206ENST00000638536 VSIG10Q8N0Z9 540 aa28.71■■■□□ 2.19
SCN1B-206ENST00000638536 KDM3BQ7LBC6 1761 aa28.7■■■□□ 2.19
SCN1B-206ENST00000638536 SENP3-EIF4A1A0A087X0R7 540 aa28.7■■■□□ 2.19
SCN1B-206ENST00000638536 APAF1O14727 1248 aa28.7■■■□□ 2.19
SCN1B-206ENST00000638536 SLC16A10Q8TF71 515 aa28.7■■■□□ 2.19
SCN1B-206ENST00000638536 PRAMEF22A3QJZ6 481 aa28.69■■■□□ 2.18
SCN1B-206ENST00000638536 MSL1Q68DK7 614 aa28.69■■■□□ 2.18
SCN1B-206ENST00000638536 RPS6KA4O75676 772 aa28.69■■■□□ 2.18
SCN1B-206ENST00000638536 FLAD1Q8NFF5 587 aa28.69■■■□□ 2.18
SCN1B-206ENST00000638536 FMNL2Q96PY5 1086 aa28.69■■■□□ 2.18
SCN1B-206ENST00000638536 RTCBQ9Y3I0 505 aaKnown RBP28.69■■■□□ 2.18
SCN1B-206ENST00000638536 C4AP0C0L4 1744 aa28.67■■■□□ 2.18
SCN1B-206ENST00000638536 ARHGEF1Q92888 912 aaKnown RBP28.66■■■□□ 2.18
SCN1B-206ENST00000638536 CCDC87Q9NVE4 849 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms