RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 KDM6AO15550 1401 aaPredicted RBP15.15■□□□□ 0.02
CLN6-223ENST00000637823 SOS1Q07889 1333 aaPredicted RBP15.15■□□□□ 0.02
CLN6-223ENST00000637823 BTBD11A6QL63 1104 aa15.14■□□□□ 0.01
CLN6-223ENST00000637823 EXOC5O00471 708 aa15.14■□□□□ 0.01
CLN6-223ENST00000637823 IRX6P78412 446 aaPredicted RBP15.14■□□□□ 0.01
CLN6-223ENST00000637823 BARGINQ6ZT62 677 aa15.14■□□□□ 0.01
CLN6-223ENST00000637823 DDX54Q8TDD1 881 aaKnown RBP15.14■□□□□ 0.01
CLN6-223ENST00000637823 SLC52A2Q9HAB3 445 aa15.14■□□□□ 0.01
CLN6-223ENST00000637823 CCDC9Q9Y3X0 531 aaKnown RBP15.14■□□□□ 0.01
CLN6-223ENST00000637823 ERVV-2B6SEH9 535 aa15.13■□□□□ 0.01
CLN6-223ENST00000637823 ELL2O00472 640 aaPredicted RBP15.13■□□□□ 0.01
CLN6-223ENST00000637823 PLIN1O60240 522 aa15.13■□□□□ 0.01
CLN6-223ENST00000637823 BRPF1P55201 1214 aaPredicted RBP15.13■□□□□ 0.01
CLN6-223ENST00000637823 SSH1Q8WYL5 1049 aa15.13■□□□□ 0.01
CLN6-223ENST00000637823 USP21Q9UK80 565 aa15.13■□□□□ 0.01
CLN6-223ENST00000637823 KAT6BQ8WYB5 2073 aa15.13■□□□□ 0.01
CLN6-223ENST00000637823 SMC4Q9NTJ3 1288 aa15.12■□□□□ 0.01
CLN6-223ENST00000637823 MRC1P22897 1456 aa15.12■□□□□ 0.01
CLN6-223ENST00000637823 CABP4P57796 275 aa15.11■□□□□ 0.01
CLN6-223ENST00000637823 NFATC2IPQ8NCF5 419 aa15.11■□□□□ 0.01
CLN6-223ENST00000637823 EIF4A1P60842 406 aaKnown RBP15.1■□□□□ 0.01
CLN6-223ENST00000637823 PDE3AQ14432 1141 aa15.1■□□□□ 0.01
CLN6-223ENST00000637823 KRT24Q2M2I5 525 aa15.1■□□□□ 0.01
CLN6-223ENST00000637823 BCL2L13Q9BXK5 485 aa15.1■□□□□ 0.01
CLN6-223ENST00000637823 CHMP4AQ9BY43 222 aa15.1■□□□□ 0.01
CLN6-223ENST00000637823 ITGB4P16144 1822 aa15.1■□□□□ 0.01
CLN6-223ENST00000637823 IPO8O15397 1037 aaKnown RBP15.09■□□□□ 0.01
CLN6-223ENST00000637823 MS4A1P11836 297 aa15.09■□□□□ 0.01
CLN6-223ENST00000637823 CANXP27824 592 aaKnown RBP15.09■□□□□ 0.01
CLN6-223ENST00000637823 DDB1Q16531 1140 aa15.09■□□□□ 0.01
CLN6-223ENST00000637823 MRPL50Q8N5N7 158 aaKnown RBP15.09■□□□□ 0.01
CLN6-223ENST00000637823 FRAT1Q92837 279 aaPredicted RBP15.09■□□□□ 0.01
CLN6-223ENST00000637823 AFF2P51816 1311 aa15.09■□□□□ 0.01
CLN6-223ENST00000637823 TNS2Q63HR2 1409 aa15.09■□□□□ 0.01
CLN6-223ENST00000637823 HOXB7P09629 217 aa15.08■□□□□ 0
CLN6-223ENST00000637823 ZKSCAN2Q63HK3 967 aa15.08■□□□□ 0
CLN6-223ENST00000637823 KIF16BQ96L93 1317 aa15.08■□□□□ 0
CLN6-223ENST00000637823 TOGARAM1Q9Y4F4 1720 aa15.07■□□□□ 0
CLN6-223ENST00000637823 KCNQ3O43525 872 aa15.07■□□□□ 0
CLN6-223ENST00000637823 ZNF790Q6PG37 636 aa15.07■□□□□ 0
CLN6-223ENST00000637823 ARHGAP45Q92619 1136 aa15.07■□□□□ 0
CLN6-223ENST00000637823 C20orf194Q5TEA3 1177 aa15.06■□□□□ 0
CLN6-223ENST00000637823 CCDC30Q5VVM6 783 aa15.06■□□□□ 0
CLN6-223ENST00000637823 PPP4R2Q9NY27 417 aa15.06■□□□□ 0
CLN6-223ENST00000637823 NOB1Q9ULX3 412 aaKnown RBP15.06■□□□□ 0
CLN6-223ENST00000637823 HEG1Q9ULI3 1381 aa15.06■□□□□ 0
CLN6-223ENST00000637823 FAM98CQ17RN3 349 aaKnown RBP15.05■□□□□ -0
CLN6-223ENST00000637823 ATF7IPQ6VMQ6 1270 aa15.05■□□□□ -0
CLN6-223ENST00000637823 GJD4Q96KN9 370 aaPredicted RBP15.05■□□□□ -0
CLN6-223ENST00000637823 TRPC5Q9UL62 973 aaPredicted RBP15.05■□□□□ -0
CLN6-223ENST00000637823 ATRNO75882 1429 aa15.05■□□□□ -0
CLN6-223ENST00000637823 TCERG1O14776 1098 aaKnown RBP15.04■□□□□ -0
CLN6-223ENST00000637823 SLC39A6Q13433 755 aa15.04■□□□□ -0
CLN6-223ENST00000637823 TTC5Q8N0Z6 440 aa15.04■□□□□ -0
CLN6-223ENST00000637823 EXOC6Q8TAG9 804 aa15.04■□□□□ -0
CLN6-223ENST00000637823 CRBNQ96SW2 442 aa15.04■□□□□ -0
CLN6-223ENST00000637823 STK31Q9BXU1 1019 aa15.04■□□□□ -0
CLN6-223ENST00000637823 UBR2Q8IWV8 1755 aa15.03■□□□□ -0
CLN6-223ENST00000637823 PAPPAQ13219 1627 aa15.03■□□□□ -0
CLN6-223ENST00000637823 GIGYF1O75420 1035 aaPredicted RBP15.03■□□□□ -0
CLN6-223ENST00000637823 SLC4A2P04920 1241 aa15.03■□□□□ -0
CLN6-223ENST00000637823 DZIP1LQ8IYY4 767 aaKnown RBP15.03■□□□□ -0
CLN6-223ENST00000637823 MARCH10Q8NA82 808 aaPredicted RBP15.03■□□□□ -0
CLN6-223ENST00000637823 TMOD3Q9NYL9 352 aa15.03■□□□□ -0
CLN6-223ENST00000637823 THSD7AQ9UPZ6 1657 aa15.03■□□□□ -0
CLN6-223ENST00000637823 GLI3P10071 1580 aa15.02■□□□□ -0
CLN6-223ENST00000637823 ONECUT3O60422 494 aaPredicted RBP15.02■□□□□ -0
CLN6-223ENST00000637823 TRIM27P14373 513 aa15.02■□□□□ -0
CLN6-223ENST00000637823 HDGFL1Q5TGJ6 251 aa15.02■□□□□ -0
CLN6-223ENST00000637823 PANK1Q8TE04 598 aa15.02■□□□□ -0
CLN6-223ENST00000637823 FMNL2Q96PY5 1086 aa15.02■□□□□ -0
CLN6-223ENST00000637823 QTRT2Q9H974 415 aaKnown RBP15.02■□□□□ -0
CLN6-223ENST00000637823 DOT1LQ8TEK3 1739 aa15.01□□□□□ -0.01
CLN6-223ENST00000637823 PTPRCP08575 1304 aa15.01□□□□□ -0.01
CLN6-223ENST00000637823 FTSJ3Q8IY81 847 aaKnown RBP15.01□□□□□ -0.01
CLN6-223ENST00000637823 ZNF496Q96IT1 587 aaPredicted RBP15.01□□□□□ -0.01
CLN6-223ENST00000637823 API5Q9BZZ5 524 aaKnown RBP15.01□□□□□ -0.01
CLN6-223ENST00000637823 C5P01031 1676 aa15□□□□□ -0.01
CLN6-223ENST00000637823 SNRPA1P09661 255 aaKnown RBP15□□□□□ -0.01
CLN6-223ENST00000637823 RLBP1P12271 317 aa15□□□□□ -0.01
CLN6-223ENST00000637823 EIF2S2P20042 333 aaKnown RBP15□□□□□ -0.01
CLN6-223ENST00000637823 PIGBQ92521 554 aa15□□□□□ -0.01
CLN6-223ENST00000637823 AAMPQ13685 434 aa14.99□□□□□ -0.01
CLN6-223ENST00000637823 NECTIN2Q92692 538 aa14.99□□□□□ -0.01
CLN6-223ENST00000637823 CLUAP1Q96AJ1 413 aa14.99□□□□□ -0.01
CLN6-223ENST00000637823 TNNQ9UQP3 1299 aa14.99□□□□□ -0.01
CLN6-223ENST00000637823 BCL9O00512 1426 aa14.99□□□□□ -0.01
CLN6-223ENST00000637823 LAMB4A4D0S4 1761 aa14.98□□□□□ -0.01
CLN6-223ENST00000637823 A0A0G2JS52 829 aa14.98□□□□□ -0.01
CLN6-223ENST00000637823 PRIM1P49642 420 aaKnown RBP14.98□□□□□ -0.01
CLN6-223ENST00000637823 MYT1Q01538 1121 aa14.98□□□□□ -0.01
CLN6-223ENST00000637823 ZNF772Q68DY9 489 aaPredicted RBP14.98□□□□□ -0.01
CLN6-223ENST00000637823 DBF4Q9UBU7 674 aaPredicted RBP14.98□□□□□ -0.01
CLN6-223ENST00000637823 COG6Q9Y2V7 657 aa14.98□□□□□ -0.01
CLN6-223ENST00000637823 KCPQ6ZWJ8 1503 aa14.97□□□□□ -0.01
CLN6-223ENST00000637823 MVPQ14764 893 aaKnown RBP14.97□□□□□ -0.01
CLN6-223ENST00000637823 ATG3Q9NT62 314 aa14.97□□□□□ -0.01
CLN6-223ENST00000637823 G2E3Q7L622 706 aa14.96□□□□□ -0.01
CLN6-223ENST00000637823 TEX13AQ9BXU3 409 aaPredicted RBP14.96□□□□□ -0.01
CLN6-223ENST00000637823 ASAP1Q9ULH1 1129 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms