RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 NFATC2IPQ8NCF5 419 aa27.8■■■□□ 2.04
SF1-221ENST00000633899 SPON1Q9HCB6 807 aa27.8■■■□□ 2.04
SF1-221ENST00000633899 MAP3K5Q99683 1374 aa27.8■■■□□ 2.04
SF1-221ENST00000633899 RNMTO43148 476 aaKnown RBP27.79■■■□□ 2.04
SF1-221ENST00000633899 GNAT3A8MTJ3 354 aa27.78■■■□□ 2.04
SF1-221ENST00000633899 RBM42Q9BTD8 480 aaKnown RBP27.78■■■□□ 2.04
SF1-221ENST00000633899 PDGFDQ9GZP0 370 aaPredicted RBP27.78■■■□□ 2.04
SF1-221ENST00000633899 LGR6Q9HBX8 967 aa27.78■■■□□ 2.04
SF1-221ENST00000633899 C4BP0C0L5 1744 aa27.78■■■□□ 2.04
SF1-221ENST00000633899 ADAMTS7Q9UKP4 1686 aa27.78■■■□□ 2.04
SF1-221ENST00000633899 ZBTB7AO95365 584 aa27.77■■■□□ 2.04
SF1-221ENST00000633899 ATP6V1AP38606 617 aa27.77■■■□□ 2.04
SF1-221ENST00000633899 SLC52A2Q9HAB3 445 aa27.77■■■□□ 2.04
SF1-221ENST00000633899 PHACTR3Q96KR7 559 aa27.76■■■□□ 2.03
SF1-221ENST00000633899 MRC1P22897 1456 aa27.76■■■□□ 2.03
SF1-221ENST00000633899 AK7Q96M32 723 aa27.75■■■□□ 2.03
SF1-221ENST00000633899 SRCAPQ6ZRS2 3230 aa27.75■■■□□ 2.03
SF1-221ENST00000633899 PNNQ9H307 717 aaKnown RBP27.74■■■□□ 2.03
SF1-221ENST00000633899 PRKRIP1Q9H875 184 aaPredicted RBP27.74■■■□□ 2.03
SF1-221ENST00000633899 PNPLA7Q6ZV29 1317 aa27.73■■■□□ 2.03
SF1-221ENST00000633899 ZNF831Q5JPB2 1677 aa27.73■■■□□ 2.03
SF1-221ENST00000633899 PPP1R1BQ9UD71 204 aaPredicted RBP27.73■■■□□ 2.03
SF1-221ENST00000633899 MSH5O43196 834 aa27.72■■■□□ 2.03
SF1-221ENST00000633899 TEFQ10587 303 aa27.72■■■□□ 2.03
SF1-221ENST00000633899 MTFR1LQ9H019 292 aa27.72■■■□□ 2.03
SF1-221ENST00000633899 ATF5Q9Y2D1 282 aaPredicted RBP27.71■■■□□ 2.03
SF1-221ENST00000633899 PTCD1O75127 700 aaKnown RBP27.7■■■□□ 2.02
SF1-221ENST00000633899 LINC00116Q8NCU8 138 aa27.7■■■□□ 2.02
SF1-221ENST00000633899 RTF1Q92541 710 aaKnown RBP27.7■■■□□ 2.02
SF1-221ENST00000633899 MAPK8IP3Q9UPT6 1336 aa27.69■■■□□ 2.02
SF1-221ENST00000633899 ITPK1Q13572 414 aa27.69■■■□□ 2.02
SF1-221ENST00000633899 SLC16A10Q8TF71 515 aa27.69■■■□□ 2.02
SF1-221ENST00000633899 UBR3Q6ZT12 1888 aa27.69■■■□□ 2.02
SF1-221ENST00000633899 COL5A3P25940 1745 aaPredicted RBP27.68■■■□□ 2.02
SF1-221ENST00000633899 FLAD1Q8NFF5 587 aa27.68■■■□□ 2.02
SF1-221ENST00000633899 DLG5Q8TDM6 1919 aa27.67■■■□□ 2.02
SF1-221ENST00000633899 IL17REQ8NFR9 667 aa27.67■■■□□ 2.02
SF1-221ENST00000633899 SIPA1L3O60292 1781 aaPredicted RBP27.67■■■□□ 2.02
SF1-221ENST00000633899 WDR43Q15061 677 aaKnown RBP eCLIP27.66■■■□□ 2.02
SF1-221ENST00000633899 SLC39A6Q13433 755 aa27.65■■■□□ 2.02
SF1-221ENST00000633899 TTC5Q8N0Z6 440 aa27.65■■■□□ 2.02
SF1-221ENST00000633899 SLC4A9Q96Q91 983 aa27.65■■■□□ 2.02
SF1-221ENST00000633899 GNPATO15228 680 aa27.64■■■□□ 2.02
SF1-221ENST00000633899 PHF14O94880 888 aa27.64■■■□□ 2.02
SF1-221ENST00000633899 COL23A1Q86Y22 540 aaPredicted RBP27.64■■■□□ 2.02
SF1-221ENST00000633899 TJP1Q07157 1748 aa27.64■■■□□ 2.01
SF1-221ENST00000633899 CEMIPQ8WUJ3 1361 aa27.62■■■□□ 2.01
SF1-221ENST00000633899 PLEKHF1Q96S99 279 aa27.62■■■□□ 2.01
SF1-221ENST00000633899 UBR2Q8IWV8 1755 aa27.62■■■□□ 2.01
SF1-221ENST00000633899 CICQ96RK0 1608 aaPredicted RBP27.62■■■□□ 2.01
SF1-221ENST00000633899 HTATSF1O43719 755 aaKnown RBP27.61■■■□□ 2.01
SF1-221ENST00000633899 SSFA2P28290 1259 aa27.61■■■□□ 2.01
SF1-221ENST00000633899 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.6■■■□□ 2.01
SF1-221ENST00000633899 POLD1P28340 1107 aa27.6■■■□□ 2.01
SF1-221ENST00000633899 PTGER2P43116 358 aa27.6■■■□□ 2.01
SF1-221ENST00000633899 MCM10Q7L590 875 aa27.6■■■□□ 2.01
SF1-221ENST00000633899 CNTNAP4Q9C0A0 1308 aa27.6■■■□□ 2.01
SF1-221ENST00000633899 KCPQ6ZWJ8 1503 aa27.59■■■□□ 2.01
SF1-221ENST00000633899 NFE2L2Q16236 605 aa27.59■■■□□ 2.01
SF1-221ENST00000633899 RTCBQ9Y3I0 505 aaKnown RBP27.59■■■□□ 2.01
SF1-221ENST00000633899 ANP32CO43423 234 aa27.58■■■□□ 2.01
SF1-221ENST00000633899 RC3H1Q5TC82 1133 aaKnown RBP27.58■■■□□ 2.01
SF1-221ENST00000633899 BTBD11A6QL63 1104 aa27.57■■■□□ 2
SF1-221ENST00000633899 DCTN1Q14203 1278 aa27.57■■■□□ 2
SF1-221ENST00000633899 COL24A1Q17RW2 1714 aa27.57■■■□□ 2
SF1-221ENST00000633899 MYH14Q7Z406 1995 aaKnown RBP27.57■■■□□ 2
SF1-221ENST00000633899 ZNF790Q6PG37 636 aa27.56■■■□□ 2
SF1-221ENST00000633899 AMIGO3Q86WK7 504 aa27.55■■■□□ 2
SF1-221ENST00000633899 DNAJC10Q8IXB1 793 aa27.55■■■□□ 2
SF1-221ENST00000633899 CRKLP46109 303 aaKnown RBP27.54■■■□□ 2
SF1-221ENST00000633899 TRAPPC3LQ5T215 181 aa27.54■■■□□ 2
SF1-221ENST00000633899 MSL1Q68DK7 614 aa27.54■■■□□ 2
SF1-221ENST00000633899 SMIM5Q71RC9 77 aa27.54■■■□□ 2
SF1-221ENST00000633899 VSIG10Q8N0Z9 540 aa27.54■■■□□ 2
SF1-221ENST00000633899 ARXQ96QS3 562 aa27.54■■■□□ 2
SF1-221ENST00000633899 SGIP1Q9BQI5 828 aa27.54■■■□□ 2
SF1-221ENST00000633899 CCDC146Q8IYE0 955 aa27.53■■■□□ 2
SF1-221ENST00000633899 RPS6KA4O75676 772 aa27.52■■■□□ 2
SF1-221ENST00000633899 FMNL2Q96PY5 1086 aa27.52■■■□□ 2
SF1-221ENST00000633899 ADRA2BP18089 450 aa27.51■■□□□ 1.99
SF1-221ENST00000633899 HEG1Q9ULI3 1381 aa27.5■■□□□ 1.99
SF1-221ENST00000633899 RUNDC1Q96C34 613 aa27.5■■□□□ 1.99
SF1-221ENST00000633899 ZNF496Q96IT1 587 aaPredicted RBP27.5■■□□□ 1.99
SF1-221ENST00000633899 ADAMTS8Q9UP79 889 aa27.5■■□□□ 1.99
SF1-221ENST00000633899 RFC4P35249 363 aa27.49■■□□□ 1.99
SF1-221ENST00000633899 RIPK4P57078 832 aa27.49■■□□□ 1.99
SF1-221ENST00000633899 LMOD3Q0VAK6 560 aa27.49■■□□□ 1.99
SF1-221ENST00000633899 TAF7Q15545 349 aaPredicted RBP27.49■■□□□ 1.99
SF1-221ENST00000633899 KLHL34Q8N239 644 aa27.49■■□□□ 1.99
SF1-221ENST00000633899 CCDC87Q9NVE4 849 aa27.49■■□□□ 1.99
SF1-221ENST00000633899 C4AP0C0L4 1744 aa27.49■■□□□ 1.99
SF1-221ENST00000633899 STARD3NLO95772 234 aa27.48■■□□□ 1.99
SF1-221ENST00000633899 TEX13AQ9BXU3 409 aaPredicted RBP27.48■■□□□ 1.99
SF1-221ENST00000633899 CYP19A1P11511 503 aaPredicted RBP27.47■■□□□ 1.99
SF1-221ENST00000633899 TMPOP42166 694 aaKnown RBP27.47■■□□□ 1.99
SF1-221ENST00000633899 FHDC1Q9C0D6 1143 aaPredicted RBP27.47■■□□□ 1.99
SF1-221ENST00000633899 KCNQ3O43525 872 aa27.46■■□□□ 1.99
SF1-221ENST00000633899 PNISRQ8TF01 805 aaKnown RBP27.46■■□□□ 1.99
SF1-221ENST00000633899 ARHGEF1Q92888 912 aaKnown RBP27.46■■□□□ 1.99
SF1-221ENST00000633899 NEUROD2Q15784 382 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms