RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 KCNQ3O43525 872 aa10.94□□□□□ -0.66
MECP2-220ENST00000631210 LMOD3Q0VAK6 560 aa10.94□□□□□ -0.66
MECP2-220ENST00000631210 ILDR2Q71H61 639 aa10.94□□□□□ -0.66
MECP2-220ENST00000631210 WDR63Q8IWG1 891 aa10.94□□□□□ -0.66
MECP2-220ENST00000631210 TRMT2AQ8IZ69 625 aaKnown RBP10.94□□□□□ -0.66
MECP2-220ENST00000631210 CDCA7LQ96GN5 454 aa10.94□□□□□ -0.66
MECP2-220ENST00000631210 UBR2Q8IWV8 1755 aa10.94□□□□□ -0.66
MECP2-220ENST00000631210 TNS1Q9HBL0 1735 aaKnown RBP10.94□□□□□ -0.66
MECP2-220ENST00000631210 IL16Q14005 1332 aa10.93□□□□□ -0.66
MECP2-220ENST00000631210 KAT6BQ8WYB5 2073 aa10.93□□□□□ -0.66
MECP2-220ENST00000631210 FAM196AQ6ZSG2 479 aa10.93□□□□□ -0.66
MECP2-220ENST00000631210 RTF1Q92541 710 aaKnown RBP10.93□□□□□ -0.66
MECP2-220ENST00000631210 MIS18AQ9NYP9 233 aa10.93□□□□□ -0.66
MECP2-220ENST00000631210 KCPQ6ZWJ8 1503 aa10.93□□□□□ -0.66
MECP2-220ENST00000631210 HEG1Q9ULI3 1381 aa10.92□□□□□ -0.66
MECP2-220ENST00000631210 CABP4P57796 275 aa10.92□□□□□ -0.66
MECP2-220ENST00000631210 SLFN5Q08AF3 891 aa10.92□□□□□ -0.66
MECP2-220ENST00000631210 TAF7Q15545 349 aaPredicted RBP10.92□□□□□ -0.66
MECP2-220ENST00000631210 CFAP44Q96MT7 982 aa10.92□□□□□ -0.66
MECP2-220ENST00000631210 ATG3Q9NT62 314 aa10.92□□□□□ -0.66
MECP2-220ENST00000631210 SLC39A6Q13433 755 aa10.91□□□□□ -0.66
MECP2-220ENST00000631210 YTHDC1Q96MU7 727 aaKnown RBP10.91□□□□□ -0.66
MECP2-220ENST00000631210 SLC4A9Q96Q91 983 aa10.91□□□□□ -0.66
MECP2-220ENST00000631210 BCL11BQ9C0K0 894 aaPredicted RBP10.91□□□□□ -0.66
MECP2-220ENST00000631210 MBIPQ9NS73 344 aa10.91□□□□□ -0.66
MECP2-220ENST00000631210 IFT57Q9NWB7 429 aa10.91□□□□□ -0.66
MECP2-220ENST00000631210 ASAP1Q9ULH1 1129 aa10.91□□□□□ -0.66
MECP2-220ENST00000631210 TRIM37O94972 964 aa10.9□□□□□ -0.66
MECP2-220ENST00000631210 GOLGA2Q08379 1002 aa10.9□□□□□ -0.66
MECP2-220ENST00000631210 TEFQ10587 303 aa10.9□□□□□ -0.66
MECP2-220ENST00000631210 DUSP27Q5VZP5 1158 aa10.9□□□□□ -0.66
MECP2-220ENST00000631210 TMOD3Q9NYL9 352 aa10.9□□□□□ -0.66
MECP2-220ENST00000631210 LY75O60449 1722 aa10.89□□□□□ -0.67
MECP2-220ENST00000631210 FANCIQ9NVI1 1328 aa10.89□□□□□ -0.67
MECP2-220ENST00000631210 EIF4A1P60842 406 aaKnown RBP10.89□□□□□ -0.67
MECP2-220ENST00000631210 KRT24Q2M2I5 525 aa10.89□□□□□ -0.67
MECP2-220ENST00000631210 ZNF790Q6PG37 636 aa10.89□□□□□ -0.67
MECP2-220ENST00000631210 TSR2Q969E8 191 aaKnown RBP10.89□□□□□ -0.67
MECP2-220ENST00000631210 BABAM1Q9NWV8 329 aa10.89□□□□□ -0.67
MECP2-220ENST00000631210 CICQ96RK0 1608 aaPredicted RBP10.88□□□□□ -0.67
MECP2-220ENST00000631210 BTBD11A6QL63 1104 aa10.88□□□□□ -0.67
MECP2-220ENST00000631210 GNAI1P63096 354 aa10.88□□□□□ -0.67
MECP2-220ENST00000631210 PROM2Q8N271 834 aa10.88□□□□□ -0.67
MECP2-220ENST00000631210 SYTL4Q96C24 671 aaPredicted RBP10.88□□□□□ -0.67
MECP2-220ENST00000631210 ZNF496Q96IT1 587 aaPredicted RBP10.88□□□□□ -0.67
MECP2-220ENST00000631210 C5P01031 1676 aa10.88□□□□□ -0.67
MECP2-220ENST00000631210 ZNF831Q5JPB2 1677 aa10.88□□□□□ -0.67
MECP2-220ENST00000631210 TJP1Q07157 1748 aa10.87□□□□□ -0.67
MECP2-220ENST00000631210 PRAMEF22A3QJZ6 481 aa10.87□□□□□ -0.67
MECP2-220ENST00000631210 E9PSI1 815 aa10.87□□□□□ -0.67
MECP2-220ENST00000631210 CALD1Q05682 793 aaKnown RBP10.87□□□□□ -0.67
MECP2-220ENST00000631210 TSPYL6Q8N831 410 aa10.87□□□□□ -0.67
MECP2-220ENST00000631210 C8orf58Q8NAV2 365 aa10.87□□□□□ -0.67
MECP2-220ENST00000631210 TSPYL4Q9UJ04 414 aa10.87□□□□□ -0.67
MECP2-220ENST00000631210 RGPD3A6NKT7 1758 aaPredicted RBP10.86□□□□□ -0.67
MECP2-220ENST00000631210 RGPD4Q7Z3J3 1758 aa10.86□□□□□ -0.67
MECP2-220ENST00000631210 LAS1LQ9Y4W2 734 aaKnown RBP10.86□□□□□ -0.67
MECP2-220ENST00000631210 PALLDQ8WX93 1383 aa10.86□□□□□ -0.67
MECP2-220ENST00000631210 COL5A3P25940 1745 aaPredicted RBP10.85□□□□□ -0.67
MECP2-220ENST00000631210 GIGYF1O75420 1035 aaPredicted RBP10.85□□□□□ -0.67
MECP2-220ENST00000631210 EXOSC9Q06265 439 aaKnown RBP10.85□□□□□ -0.67
MECP2-220ENST00000631210 ITPK1Q13572 414 aa10.85□□□□□ -0.67
MECP2-220ENST00000631210 LRRC4BQ9NT99 713 aa10.85□□□□□ -0.67
MECP2-220ENST00000631210 TAF1LQ8IZX4 1826 aa10.84□□□□□ -0.67
MECP2-220ENST00000631210 PLSCR1O15162 318 aa10.84□□□□□ -0.67
MECP2-220ENST00000631210 UPF1Q92900 1129 aaKnown RBP eCLIP10.84□□□□□ -0.677e-7■□□□□ 11
MECP2-220ENST00000631210 CAMKK2Q96RR4 588 aa10.84□□□□□ -0.67
MECP2-220ENST00000631210 RREB1Q92766 1687 aa10.84□□□□□ -0.67
MECP2-220ENST00000631210 MYH14Q7Z406 1995 aaKnown RBP10.84□□□□□ -0.67
MECP2-220ENST00000631210 LAMB4A4D0S4 1761 aa10.83□□□□□ -0.68
MECP2-220ENST00000631210 LOC102724428A0A0B4J2F2 783 aa10.83□□□□□ -0.68
MECP2-220ENST00000631210 PTCD1O75127 700 aaKnown RBP10.83□□□□□ -0.68
MECP2-220ENST00000631210 VAMP4O75379 141 aa10.83□□□□□ -0.68
MECP2-220ENST00000631210 APBA3O96018 575 aa10.83□□□□□ -0.68
MECP2-220ENST00000631210 KCNQ4P56696 695 aa10.83□□□□□ -0.68
MECP2-220ENST00000631210 SIK1P57059 783 aa10.83□□□□□ -0.68
MECP2-220ENST00000631210 SMARCC1Q92922 1105 aaPredicted RBP10.83□□□□□ -0.68
MECP2-220ENST00000631210 MYH16Q9H6N6 1097 aa10.83□□□□□ -0.68
MECP2-220ENST00000631210 USP16Q9Y5T5 823 aa10.83□□□□□ -0.68
MECP2-220ENST00000631210 LRP10Q7Z4F1 713 aa10.82□□□□□ -0.68
MECP2-220ENST00000631210 DEFB132Q7Z7B7 95 aa10.82□□□□□ -0.68
MECP2-220ENST00000631210 DNAJC10Q8IXB1 793 aa10.82□□□□□ -0.68
MECP2-220ENST00000631210 VSIG10Q8N0Z9 540 aa10.82□□□□□ -0.68
MECP2-220ENST00000631210 FMNL2Q96PY5 1086 aa10.82□□□□□ -0.68
MECP2-220ENST00000631210 ELL2O00472 640 aaPredicted RBP10.81□□□□□ -0.68
MECP2-220ENST00000631210 CYP19A1P11511 503 aaPredicted RBP10.81□□□□□ -0.68
MECP2-220ENST00000631210 EN1Q05925 392 aaPredicted RBP10.81□□□□□ -0.68
MECP2-220ENST00000631210 PDIA6Q15084 440 aa10.81□□□□□ -0.68
MECP2-220ENST00000631210 TXNRD1Q16881 649 aa10.81□□□□□ -0.68
MECP2-220ENST00000631210 TTC5Q8N0Z6 440 aa10.81□□□□□ -0.68
MECP2-220ENST00000631210 LINC00116Q8NCU8 138 aa10.81□□□□□ -0.68
MECP2-220ENST00000631210 RBM42Q9BTD8 480 aaKnown RBP10.81□□□□□ -0.68
MECP2-220ENST00000631210 NBPF26B4DH59 902 aa10.8□□□□□ -0.68
MECP2-220ENST00000631210 HOXB7P09629 217 aa10.8□□□□□ -0.68
MECP2-220ENST00000631210 SNRPA1P09661 255 aaKnown RBP10.8□□□□□ -0.68
MECP2-220ENST00000631210 EZH2Q15910 746 aaKnown RBP10.8□□□□□ -0.68
MECP2-220ENST00000631210 TWISTNBQ3B726 338 aaPredicted RBP10.8□□□□□ -0.68
MECP2-220ENST00000631210 NBPF14Q5TI25 921 aa10.8□□□□□ -0.68
MECP2-220ENST00000631210 NBPF10Q6P3W6 841 aaKnown RBP10.8□□□□□ -0.68
MECP2-220ENST00000631210 INTS5Q6P9B9 1019 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms