RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 PLEKHF1Q96S99 279 aa10.65□□□□□ -0.7
CHD2-213ENST00000628118 TMOD3Q9NYL9 352 aa10.65□□□□□ -0.7
CHD2-213ENST00000628118 MAP3K5Q99683 1374 aa10.65□□□□□ -0.71
CHD2-213ENST00000628118 BTAF1O14981 1849 aa10.64□□□□□ -0.71
CHD2-213ENST00000628118 ITGB4P16144 1822 aa10.64□□□□□ -0.71
CHD2-213ENST00000628118 EN1Q05925 392 aaPredicted RBP10.64□□□□□ -0.71
CHD2-213ENST00000628118 SLC27A3Q5K4L6 730 aa10.64□□□□□ -0.71
CHD2-213ENST00000628118 DEFB132Q7Z7B7 95 aa10.64□□□□□ -0.71
CHD2-213ENST00000628118 SCN11AQ9UI33 1791 aa10.63□□□□□ -0.71
CHD2-213ENST00000628118 RNMTO43148 476 aaKnown RBP10.63□□□□□ -0.71
CHD2-213ENST00000628118 CABP4P57796 275 aa10.63□□□□□ -0.71
CHD2-213ENST00000628118 MPRIPQ6WCQ1 1025 aa10.63□□□□□ -0.71
CHD2-213ENST00000628118 RTF1Q92541 710 aaKnown RBP10.63□□□□□ -0.71
CHD2-213ENST00000628118 RUNDC1Q96C34 613 aa10.63□□□□□ -0.71
CHD2-213ENST00000628118 PHACTR3Q96KR7 559 aa10.63□□□□□ -0.71
CHD2-213ENST00000628118 MRS2Q9HD23 443 aa10.63□□□□□ -0.71
CHD2-213ENST00000628118 KDM6AO15550 1401 aaPredicted RBP10.63□□□□□ -0.71
CHD2-213ENST00000628118 TOGARAM1Q9Y4F4 1720 aa10.63□□□□□ -0.71
CHD2-213ENST00000628118 ADAMTS7Q9UKP4 1686 aa10.63□□□□□ -0.71
CHD2-213ENST00000628118 MRC1P22897 1456 aa10.62□□□□□ -0.71
CHD2-213ENST00000628118 LMOD3Q0VAK6 560 aa10.62□□□□□ -0.71
CHD2-213ENST00000628118 EZH2Q15910 746 aaKnown RBP10.62□□□□□ -0.71
CHD2-213ENST00000628118 NFE2L2Q16236 605 aa10.62□□□□□ -0.71
CHD2-213ENST00000628118 PIGBQ92521 554 aa10.62□□□□□ -0.71
CHD2-213ENST00000628118 SLC52A2Q9HAB3 445 aa10.62□□□□□ -0.71
CHD2-213ENST00000628118 RREB1Q92766 1687 aa10.61□□□□□ -0.71
CHD2-213ENST00000628118 CCER2I3L3R5 266 aa10.61□□□□□ -0.71
CHD2-213ENST00000628118 TXNRD1Q16881 649 aa10.61□□□□□ -0.71
CHD2-213ENST00000628118 NBPF14Q5TI25 921 aa10.61□□□□□ -0.71
CHD2-213ENST00000628118 DIEXFQ68CQ4 756 aaKnown RBP10.61□□□□□ -0.71
CHD2-213ENST00000628118 PTF1AQ7RTS3 328 aa10.61□□□□□ -0.71
CHD2-213ENST00000628118 ADAMTS8Q9UP79 889 aa10.61□□□□□ -0.71
CHD2-213ENST00000628118 CEMIPQ8WUJ3 1361 aa10.61□□□□□ -0.71
CHD2-213ENST00000628118 TEFQ10587 303 aa10.6□□□□□ -0.71
CHD2-213ENST00000628118 PNISRQ8TF01 805 aaKnown RBP10.6□□□□□ -0.71
CHD2-213ENST00000628118 LY75O60449 1722 aa10.6□□□□□ -0.71
CHD2-213ENST00000628118 PALLDQ8WX93 1383 aa10.6□□□□□ -0.71
CHD2-213ENST00000628118 VIRMAQ69YN4 1812 aaKnown RBP10.6□□□□□ -0.71
CHD2-213ENST00000628118 TMPOP42166 694 aaKnown RBP10.59□□□□□ -0.71
CHD2-213ENST00000628118 NFATC2IPQ8NCF5 419 aa10.59□□□□□ -0.71
CHD2-213ENST00000628118 IL17REQ8NFR9 667 aa10.59□□□□□ -0.71
CHD2-213ENST00000628118 LGR6Q9HBX8 967 aa10.59□□□□□ -0.71
CHD2-213ENST00000628118 SPDYE4A6NLX3 237 aa10.58□□□□□ -0.72
CHD2-213ENST00000628118 PROM2Q8N271 834 aa10.58□□□□□ -0.72
CHD2-213ENST00000628118 ATG3Q9NT62 314 aa10.58□□□□□ -0.72
CHD2-213ENST00000628118 CCNL1Q9UK58 526 aaPredicted RBP10.58□□□□□ -0.72
CHD2-213ENST00000628118 SSUH2Q9Y2M2 353 aa10.58□□□□□ -0.72
CHD2-213ENST00000628118 NUP188Q5SRE5 1749 aa10.58□□□□□ -0.72
CHD2-213ENST00000628118 ZNF831Q5JPB2 1677 aa10.57□□□□□ -0.72
CHD2-213ENST00000628118 DLG5Q8TDM6 1919 aa10.57□□□□□ -0.72
CHD2-213ENST00000628118 LOC102724428A0A0B4J2F2 783 aa10.57□□□□□ -0.72
CHD2-213ENST00000628118 SIK1P57059 783 aa10.57□□□□□ -0.72
CHD2-213ENST00000628118 RIPK4P57078 832 aa10.57□□□□□ -0.72
CHD2-213ENST00000628118 CCDC184Q52MB2 194 aa10.57□□□□□ -0.72
CHD2-213ENST00000628118 NGEFQ8N5V2 710 aa10.57□□□□□ -0.72
CHD2-213ENST00000628118 AKT1S1Q96B36 256 aa10.57□□□□□ -0.72
CHD2-213ENST00000628118 BABAM1Q9NWV8 329 aa10.57□□□□□ -0.72
CHD2-213ENST00000628118 ASAP1Q9ULH1 1129 aa10.57□□□□□ -0.72
CHD2-213ENST00000628118 CCDC146Q8IYE0 955 aa10.56□□□□□ -0.72
CHD2-213ENST00000628118 TTC5Q8N0Z6 440 aa10.56□□□□□ -0.72
CHD2-213ENST00000628118 VSIG10Q8N0Z9 540 aa10.56□□□□□ -0.72
CHD2-213ENST00000628118 STK32BQ9NY57 414 aa10.56□□□□□ -0.72
CHD2-213ENST00000628118 SIPA1L3O60292 1781 aaPredicted RBP10.55□□□□□ -0.72
CHD2-213ENST00000628118 BTBD11A6QL63 1104 aa10.55□□□□□ -0.72
CHD2-213ENST00000628118 CALD1Q05682 793 aaKnown RBP10.55□□□□□ -0.72
CHD2-213ENST00000628118 TAF7Q15545 349 aaPredicted RBP10.55□□□□□ -0.72
CHD2-213ENST00000628118 LRRC4BQ9NT99 713 aa10.55□□□□□ -0.72
CHD2-213ENST00000628118 PAPPAQ13219 1627 aa10.55□□□□□ -0.72
CHD2-213ENST00000628118 APAF1O14727 1248 aa10.54□□□□□ -0.72
CHD2-213ENST00000628118 ATP6V1AP38606 617 aa10.54□□□□□ -0.72
CHD2-213ENST00000628118 SLC15A2Q16348 729 aa10.54□□□□□ -0.72
CHD2-213ENST00000628118 CCDC27Q2M243 656 aa10.54□□□□□ -0.72
CHD2-213ENST00000628118 ZNF790Q6PG37 636 aa10.54□□□□□ -0.72
CHD2-213ENST00000628118 MCM10Q7L590 875 aa10.54□□□□□ -0.72
CHD2-213ENST00000628118 TEX13AQ9BXU3 409 aaPredicted RBP10.54□□□□□ -0.72
CHD2-213ENST00000628118 CICQ96RK0 1608 aaPredicted RBP10.54□□□□□ -0.72
CHD2-213ENST00000628118 RC3H1Q5TC82 1133 aaKnown RBP10.53□□□□□ -0.72
CHD2-213ENST00000628118 FLAD1Q8NFF5 587 aa10.53□□□□□ -0.72
CHD2-213ENST00000628118 FMNL2Q96PY5 1086 aa10.53□□□□□ -0.72
CHD2-213ENST00000628118 TAF1LQ8IZX4 1826 aa10.53□□□□□ -0.72
CHD2-213ENST00000628118 UBR2Q8IWV8 1755 aa10.52□□□□□ -0.72
CHD2-213ENST00000628118 DCTN1Q14203 1278 aa10.52□□□□□ -0.73
CHD2-213ENST00000628118 FKBP8Q14318 412 aa10.52□□□□□ -0.73
CHD2-213ENST00000628118 FAM9BQ8IZU0 186 aa10.52□□□□□ -0.73
CHD2-213ENST00000628118 TRIM35Q9UPQ4 493 aa10.52□□□□□ -0.73
CHD2-213ENST00000628118 C5P01031 1676 aa10.52□□□□□ -0.73
CHD2-213ENST00000628118 QSER1Q2KHR3 1735 aa10.52□□□□□ -0.73
CHD2-213ENST00000628118 CNTNAP4Q9C0A0 1308 aa10.52□□□□□ -0.73
CHD2-213ENST00000628118 PTCD1O75127 700 aaKnown RBP10.51□□□□□ -0.73
CHD2-213ENST00000628118 SLC39A6Q13433 755 aa10.51□□□□□ -0.73
CHD2-213ENST00000628118 NEUROD2Q15784 382 aa10.51□□□□□ -0.73
CHD2-213ENST00000628118 AK7Q96M32 723 aa10.51□□□□□ -0.73
CHD2-213ENST00000628118 ANO8Q9HCE9 1232 aaPredicted RBP10.51□□□□□ -0.73
CHD2-213ENST00000628118 RRP7AQ9Y3A4 280 aaKnown RBP10.51□□□□□ -0.73
CHD2-213ENST00000628118 KCPQ6ZWJ8 1503 aa10.51□□□□□ -0.73
CHD2-213ENST00000628118 HEG1Q9ULI3 1381 aa10.51□□□□□ -0.73
CHD2-213ENST00000628118 C4BP0C0L5 1744 aa10.5□□□□□ -0.73
CHD2-213ENST00000628118 STARD3NLO95772 234 aa10.5□□□□□ -0.73
CHD2-213ENST00000628118 SSFA2P28290 1259 aa10.5□□□□□ -0.73
CHD2-213ENST00000628118 ITPK1Q13572 414 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms