RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 SENP3-EIF4A1A0A087X0R7 540 aa16.28■□□□□ 0.2
LINC00963-216ENST00000623185 ZNF853P0CG23 659 aa16.28■□□□□ 0.2
LINC00963-216ENST00000623185 SF3B2Q13435 895 aaKnown RBP16.28■□□□□ 0.2
LINC00963-216ENST00000623185 ATG3Q9NT62 314 aa16.28■□□□□ 0.2
LINC00963-216ENST00000623185 APBA3O96018 575 aa16.27■□□□□ 0.2
LINC00963-216ENST00000623185 GNAI1P63096 354 aa16.27■□□□□ 0.2
LINC00963-216ENST00000623185 HNRNPUQ00839 825 aaKnown RBP eCLIP16.27■□□□□ 0.22e-9■■■□□ 15
LINC00963-216ENST00000623185 ZNF790Q6PG37 636 aa16.27■□□□□ 0.2
LINC00963-216ENST00000623185 UPF1Q92900 1129 aaKnown RBP eCLIP16.27■□□□□ 0.22e-6■■□□□ 14
LINC00963-216ENST00000623185 IFT57Q9NWB7 429 aa16.27■□□□□ 0.2
LINC00963-216ENST00000623185 ASAP1Q9ULH1 1129 aa16.27■□□□□ 0.2
LINC00963-216ENST00000623185 HMGB2P26583 209 aaKnown RBP16.26■□□□□ 0.19
LINC00963-216ENST00000623185 ADAMTS7Q9UKP4 1686 aa16.26■□□□□ 0.19
LINC00963-216ENST00000623185 GOLGA2Q08379 1002 aa16.25■□□□□ 0.19
LINC00963-216ENST00000623185 SLC39A6Q13433 755 aa16.24■□□□□ 0.19
LINC00963-216ENST00000623185 MIS18AQ9NYP9 233 aa16.24■□□□□ 0.19
LINC00963-216ENST00000623185 MRC1P22897 1456 aa16.23■□□□□ 0.19
LINC00963-216ENST00000623185 BAG6P46379 1132 aa16.23■□□□□ 0.19
LINC00963-216ENST00000623185 TTC5Q8N0Z6 440 aa16.23■□□□□ 0.19
LINC00963-216ENST00000623185 TSPYL4Q9UJ04 414 aa16.23■□□□□ 0.19
LINC00963-216ENST00000623185 LAS1LQ9Y4W2 734 aaKnown RBP16.23■□□□□ 0.19
LINC00963-216ENST00000623185 SCN11AQ9UI33 1791 aa16.23■□□□□ 0.19
LINC00963-216ENST00000623185 VSIG10Q8N0Z9 540 aa16.22■□□□□ 0.19
LINC00963-216ENST00000623185 CAMKK2Q96RR4 588 aa16.22■□□□□ 0.19
LINC00963-216ENST00000623185 DLG5Q8TDM6 1919 aa16.21■□□□□ 0.19
LINC00963-216ENST00000623185 E9PSI1 815 aa16.21■□□□□ 0.19
LINC00963-216ENST00000623185 KCNQ3O43525 872 aa16.21■□□□□ 0.19
LINC00963-216ENST00000623185 EIF4A1P60842 406 aaKnown RBP16.21■□□□□ 0.19
LINC00963-216ENST00000623185 SLFN5Q08AF3 891 aa16.21■□□□□ 0.19
LINC00963-216ENST00000623185 SLC27A3Q5K4L6 730 aa16.21■□□□□ 0.19
LINC00963-216ENST00000623185 PROM2Q8N271 834 aa16.21■□□□□ 0.19
LINC00963-216ENST00000623185 FMNL2Q96PY5 1086 aa16.21■□□□□ 0.19
LINC00963-216ENST00000623185 MYH16Q9H6N6 1097 aa16.21■□□□□ 0.19
LINC00963-216ENST00000623185 MBIPQ9NS73 344 aa16.21■□□□□ 0.19
LINC00963-216ENST00000623185 ZBED9Q6R2W3 1325 aa16.2■□□□□ 0.18
LINC00963-216ENST00000623185 LOC102724428A0A0B4J2F2 783 aa16.2■□□□□ 0.18
LINC00963-216ENST00000623185 PTCD1O75127 700 aaKnown RBP16.2■□□□□ 0.18
LINC00963-216ENST00000623185 SIK1P57059 783 aa16.2■□□□□ 0.18
LINC00963-216ENST00000623185 TRMT2AQ8IZ69 625 aaKnown RBP16.2■□□□□ 0.18
LINC00963-216ENST00000623185 ZNF496Q96IT1 587 aaPredicted RBP16.2■□□□□ 0.18
LINC00963-216ENST00000623185 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
LINC00963-216ENST00000623185 TEX13AQ9BXU3 409 aaPredicted RBP16.2■□□□□ 0.18
LINC00963-216ENST00000623185 SPINK5Q9NQ38 1064 aaPredicted RBP16.2■□□□□ 0.18
LINC00963-216ENST00000623185 PALLDQ8WX93 1383 aa16.2■□□□□ 0.18
LINC00963-216ENST00000623185 SBF2Q86WG5 1849 aa16.19■□□□□ 0.18
LINC00963-216ENST00000623185 KAT6BQ8WYB5 2073 aa16.19■□□□□ 0.18
LINC00963-216ENST00000623185 NHSQ6T4R5 1651 aa16.19■□□□□ 0.18
LINC00963-216ENST00000623185 EN1Q05925 392 aaPredicted RBP16.19■□□□□ 0.18
LINC00963-216ENST00000623185 TXNRD1Q16881 649 aa16.19■□□□□ 0.18
LINC00963-216ENST00000623185 TOGARAM1Q9Y4F4 1720 aa16.19■□□□□ 0.18
LINC00963-216ENST00000623185 HEG1Q9ULI3 1381 aa16.18■□□□□ 0.18
LINC00963-216ENST00000623185 SNRPA1P09661 255 aaKnown RBP16.18■□□□□ 0.18
LINC00963-216ENST00000623185 ATP6V1AP38606 617 aa16.18■□□□□ 0.18
LINC00963-216ENST00000623185 DOT1LQ8TEK3 1739 aa16.17■□□□□ 0.18
LINC00963-216ENST00000623185 GIGYF1O75420 1035 aaPredicted RBP16.17■□□□□ 0.18
LINC00963-216ENST00000623185 DEFB132Q7Z7B7 95 aa16.17■□□□□ 0.18
LINC00963-216ENST00000623185 CDCA7LQ96GN5 454 aa16.17■□□□□ 0.18
LINC00963-216ENST00000623185 SLC4A9Q96Q91 983 aa16.17■□□□□ 0.18
LINC00963-216ENST00000623185 CCNL1Q9UK58 526 aaPredicted RBP16.17■□□□□ 0.18
LINC00963-216ENST00000623185 ITGB4P16144 1822 aa16.17■□□□□ 0.18
LINC00963-216ENST00000623185 EZH2Q15910 746 aaKnown RBP16.16■□□□□ 0.18
LINC00963-216ENST00000623185 CHMP4AQ9BY43 222 aa16.16■□□□□ 0.18
LINC00963-216ENST00000623185 SOS1Q07889 1333 aaPredicted RBP16.16■□□□□ 0.18
LINC00963-216ENST00000623185 HOXB7P09629 217 aa16.15■□□□□ 0.18
LINC00963-216ENST00000623185 TSR2Q969E8 191 aaKnown RBP16.15■□□□□ 0.18
LINC00963-216ENST00000623185 LRRC4BQ9NT99 713 aa16.15■□□□□ 0.18
LINC00963-216ENST00000623185 SOCS7O14512 581 aa16.14■□□□□ 0.17
LINC00963-216ENST00000623185 STARD3NLO95772 234 aa16.14■□□□□ 0.17
LINC00963-216ENST00000623185 DUSP27Q5VZP5 1158 aa16.14■□□□□ 0.17
LINC00963-216ENST00000623185 USP16Q9Y5T5 823 aa16.14■□□□□ 0.17
LINC00963-216ENST00000623185 EP400Q96L91 3159 aa16.14■□□□□ 0.17
LINC00963-216ENST00000623185 FANCIQ9NVI1 1328 aa16.14■□□□□ 0.17
LINC00963-216ENST00000623185 ITPK1Q13572 414 aa16.13■□□□□ 0.17
LINC00963-216ENST00000623185 RC3H1Q5TC82 1133 aaKnown RBP16.13■□□□□ 0.17
LINC00963-216ENST00000623185 C8orf58Q8NAV2 365 aa16.13■□□□□ 0.17
LINC00963-216ENST00000623185 SIPA1L3O60292 1781 aaPredicted RBP16.13■□□□□ 0.17
LINC00963-216ENST00000623185 BTAF1O14981 1849 aa16.12■□□□□ 0.17
LINC00963-216ENST00000623185 CYP19A1P11511 503 aaPredicted RBP16.12■□□□□ 0.17
LINC00963-216ENST00000623185 DNAJC10Q8IXB1 793 aa16.12■□□□□ 0.17
LINC00963-216ENST00000623185 VAMP4O75379 141 aa16.11■□□□□ 0.17
LINC00963-216ENST00000623185 KCNQ4P56696 695 aa16.11■□□□□ 0.17
LINC00963-216ENST00000623185 EXOSC9Q06265 439 aaKnown RBP16.11■□□□□ 0.17
LINC00963-216ENST00000623185 YTHDC1Q96MU7 727 aaKnown RBP16.11■□□□□ 0.17
LINC00963-216ENST00000623185 KCPQ6ZWJ8 1503 aa16.1■□□□□ 0.17
LINC00963-216ENST00000623185 PRAMEF22A3QJZ6 481 aa16.1■□□□□ 0.17
LINC00963-216ENST00000623185 ELL2O00472 640 aaPredicted RBP16.1■□□□□ 0.17
LINC00963-216ENST00000623185 CT47B1P0C2W7 299 aaPredicted RBP16.1■□□□□ 0.17
LINC00963-216ENST00000623185 KRT24Q2M2I5 525 aa16.1■□□□□ 0.17
LINC00963-216ENST00000623185 TWISTNBQ3B726 338 aaPredicted RBP16.1■□□□□ 0.17
LINC00963-216ENST00000623185 TSPYL6Q8N831 410 aa16.1■□□□□ 0.17
LINC00963-216ENST00000623185 VIRMAQ69YN4 1812 aaKnown RBP16.1■□□□□ 0.17
LINC00963-216ENST00000623185 NBPF14Q5TI25 921 aa16.09■□□□□ 0.17
LINC00963-216ENST00000623185 LINC00116Q8NCU8 138 aa16.09■□□□□ 0.17
LINC00963-216ENST00000623185 ZNF428Q96B54 188 aa16.09■□□□□ 0.17
LINC00963-216ENST00000623185 TNS1Q9HBL0 1735 aaKnown RBP16.08■□□□□ 0.17
LINC00963-216ENST00000623185 INTS5Q6P9B9 1019 aaKnown RBP16.08■□□□□ 0.16
LINC00963-216ENST00000623185 AKT1S1Q96B36 256 aa16.08■□□□□ 0.16
LINC00963-216ENST00000623185 CNTNAP4Q9C0A0 1308 aa16.08■□□□□ 0.16
LINC00963-216ENST00000623185 RPS6KA4O75676 772 aa16.07■□□□□ 0.16
LINC00963-216ENST00000623185 EIF2S2P20042 333 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms