RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 DENND4BO75064 1496 aaPredicted RBP9.89□□□□□ -0.83
ALMS1-208ENST00000620466 RRP9O43818 475 aaKnown RBP9.89□□□□□ -0.83
ALMS1-208ENST00000620466 PRPF40BQ6NWY9 871 aaKnown RBP9.89□□□□□ -0.83
ALMS1-208ENST00000620466 ARHGAP45Q92619 1136 aa9.89□□□□□ -0.83
ALMS1-208ENST00000620466 NUP62CLQ9H1M0 184 aa9.89□□□□□ -0.83
ALMS1-208ENST00000620466 RBM27Q9P2N5 1060 aaKnown RBP9.89□□□□□ -0.83
ALMS1-208ENST00000620466 RBM42Q9BTD8 480 aaKnown RBP9.88□□□□□ -0.83
ALMS1-208ENST00000620466 TATP17735 454 aaPredicted RBP9.88□□□□□ -0.83
ALMS1-208ENST00000620466 TEX35Q5T0J7 233 aa9.88□□□□□ -0.83
ALMS1-208ENST00000620466 STK38Q15208 465 aa9.88□□□□□ -0.83
ALMS1-208ENST00000620466 USHBP1Q8N6Y0 703 aa9.88□□□□□ -0.83
ALMS1-208ENST00000620466 HSP90AB2PQ58FF8 381 aa9.88□□□□□ -0.83
ALMS1-208ENST00000620466 ARGLU1Q9NWB6 273 aaPredicted RBP9.88□□□□□ -0.83
ALMS1-208ENST00000620466 INSRP06213 1382 aa9.88□□□□□ -0.83
ALMS1-208ENST00000620466 CCDC183Q5T5S1 534 aa9.88□□□□□ -0.83
ALMS1-208ENST00000620466 XBP1P17861 261 aa9.87□□□□□ -0.83
ALMS1-208ENST00000620466 CAMK4Q16566 473 aa9.87□□□□□ -0.83
ALMS1-208ENST00000620466 TSHZ3Q63HK5 1081 aa9.87□□□□□ -0.83
ALMS1-208ENST00000620466 THEMISQ8N1K5 641 aaPredicted RBP9.87□□□□□ -0.83
ALMS1-208ENST00000620466 PPP6R1Q9UPN7 881 aa9.87□□□□□ -0.83
ALMS1-208ENST00000620466 TAF7Q15545 349 aaPredicted RBP9.87□□□□□ -0.83
ALMS1-208ENST00000620466 WWC2Q6AWC2 1192 aa9.87□□□□□ -0.83
ALMS1-208ENST00000620466 SNX21Q969T3 373 aa9.87□□□□□ -0.83
ALMS1-208ENST00000620466 PPP1R1BQ9UD71 204 aaPredicted RBP9.87□□□□□ -0.83
ALMS1-208ENST00000620466 CEP170Q5SW79 1584 aa9.87□□□□□ -0.83
ALMS1-208ENST00000620466 XRCC6P12956 609 aaKnown RBP eCLIP9.87□□□□□ -0.83
ALMS1-208ENST00000620466 ZSCAN23Q3MJ62 389 aa9.87□□□□□ -0.83
ALMS1-208ENST00000620466 FMNL2Q96PY5 1086 aa9.87□□□□□ -0.83
ALMS1-208ENST00000620466 CCDC158Q5M9N0 1113 aa9.87□□□□□ -0.83
ALMS1-208ENST00000620466 WDR7Q9Y4E6 1490 aa9.87□□□□□ -0.83
ALMS1-208ENST00000620466 RUFY1Q96T51 708 aa9.87□□□□□ -0.83
ALMS1-208ENST00000620466 STRN4Q9NRL3 753 aa9.87□□□□□ -0.83
ALMS1-208ENST00000620466 KDM5AP29375 1690 aaKnown RBP9.86□□□□□ -0.83
ALMS1-208ENST00000620466 ME1P48163 572 aa9.86□□□□□ -0.83
ALMS1-208ENST00000620466 CABP4P57796 275 aa9.86□□□□□ -0.83
ALMS1-208ENST00000620466 AK7Q96M32 723 aa9.86□□□□□ -0.83
ALMS1-208ENST00000620466 TBC1D2BQ9UPU7 963 aa9.86□□□□□ -0.83
ALMS1-208ENST00000620466 GLRX3O76003 335 aaKnown RBP9.86□□□□□ -0.83
ALMS1-208ENST00000620466 XPCQ01831 940 aaPredicted RBP9.86□□□□□ -0.83
ALMS1-208ENST00000620466 KLHL40Q2TBA0 621 aa9.86□□□□□ -0.83
ALMS1-208ENST00000620466 ZFYVE27Q5T4F4 411 aa9.86□□□□□ -0.83
ALMS1-208ENST00000620466 ABCC10Q5T3U5 1492 aa9.86□□□□□ -0.83
ALMS1-208ENST00000620466 SDSP20132 328 aa9.86□□□□□ -0.83
ALMS1-208ENST00000620466 FLIIQ13045 1269 aa9.86□□□□□ -0.83
ALMS1-208ENST00000620466 CCAR1Q8IX12 1150 aaKnown RBP9.86□□□□□ -0.83
ALMS1-208ENST00000620466 C8orf58Q8NAV2 365 aa9.86□□□□□ -0.83
ALMS1-208ENST00000620466 LARP6Q9BRS8 491 aaKnown RBP9.86□□□□□ -0.83
ALMS1-208ENST00000620466 PPIP5K1Q6PFW1 1433 aa9.86□□□□□ -0.83
ALMS1-208ENST00000620466 SLC3A2P08195 630 aaKnown RBP9.85□□□□□ -0.83
ALMS1-208ENST00000620466 PANK2Q9BZ23 570 aa9.85□□□□□ -0.83
ALMS1-208ENST00000620466 DMRT2Q9Y5R5 561 aa9.85□□□□□ -0.83
ALMS1-208ENST00000620466 SF3B2Q13435 895 aaKnown RBP9.85□□□□□ -0.83
ALMS1-208ENST00000620466 MAP3K11Q16584 847 aa9.85□□□□□ -0.83
ALMS1-208ENST00000620466 DDX54Q8TDD1 881 aaKnown RBP9.85□□□□□ -0.83
ALMS1-208ENST00000620466 SPG7Q9UQ90 795 aa9.85□□□□□ -0.83
ALMS1-208ENST00000620466 ZNF518AQ6AHZ1 1483 aa9.85□□□□□ -0.83
ALMS1-208ENST00000620466 TARBP1Q13395 1621 aaKnown RBP9.85□□□□□ -0.83
ALMS1-208ENST00000620466 TTC21BQ7Z4L5 1316 aa9.85□□□□□ -0.83
ALMS1-208ENST00000620466 ASXL2Q76L83 1435 aa9.85□□□□□ -0.83
ALMS1-208ENST00000620466 ARHGEF5Q12774 1597 aa9.85□□□□□ -0.83
ALMS1-208ENST00000620466 A0A1W2PP64 1363 aa9.85□□□□□ -0.83
ALMS1-208ENST00000620466 NPC1L1Q9UHC9 1359 aa9.85□□□□□ -0.83
ALMS1-208ENST00000620466 ABCC1P33527 1531 aa9.85□□□□□ -0.83
ALMS1-208ENST00000620466 C16orf71Q8IYS4 520 aaPredicted RBP9.85□□□□□ -0.83
ALMS1-208ENST00000620466 CDK5RAP3Q96JB5 506 aa9.85□□□□□ -0.83
ALMS1-208ENST00000620466 KRT32Q14532 448 aa9.85□□□□□ -0.83
ALMS1-208ENST00000620466 GDPD2Q9HCC8 539 aa9.85□□□□□ -0.83
ALMS1-208ENST00000620466 NUTM2BA6NNL0 878 aaPredicted RBP9.84□□□□□ -0.83
ALMS1-208ENST00000620466 NUTM2EB1AL46 878 aaPredicted RBP9.84□□□□□ -0.83
ALMS1-208ENST00000620466 FERMT3Q86UX7 667 aa9.84□□□□□ -0.83
ALMS1-208ENST00000620466 NUTM2AQ8IVF1 878 aaPredicted RBP9.84□□□□□ -0.83
ALMS1-208ENST00000620466 ZBTB40Q9NUA8 1239 aa9.84□□□□□ -0.83
ALMS1-208ENST00000620466 DDX11Q96FC9 970 aa9.84□□□□□ -0.83
ALMS1-208ENST00000620466 MEIS3Q99687 375 aa9.84□□□□□ -0.83
ALMS1-208ENST00000620466 CFAP45Q9UL16 551 aa9.84□□□□□ -0.83
ALMS1-208ENST00000620466 SART3Q15020 963 aaKnown RBP9.84□□□□□ -0.83
ALMS1-208ENST00000620466 CCP110O43303 1012 aa9.84□□□□□ -0.83
ALMS1-208ENST00000620466 CNNM1Q9NRU3 951 aa9.84□□□□□ -0.83
ALMS1-208ENST00000620466 LIMCH1Q9UPQ0 1083 aa9.84□□□□□ -0.83
ALMS1-208ENST00000620466 ABCC2Q92887 1545 aa9.84□□□□□ -0.83
ALMS1-208ENST00000620466 CAGE1Q8TC20 777 aa9.84□□□□□ -0.83
ALMS1-208ENST00000620466 DNAAF4Q8WXU2 420 aa9.83□□□□□ -0.84
ALMS1-208ENST00000620466 RAB3GAP1Q15042 981 aa9.83□□□□□ -0.84
ALMS1-208ENST00000620466 RRP12Q5JTH9 1297 aaKnown RBP9.83□□□□□ -0.84
ALMS1-208ENST00000620466 TSPYL6Q8N831 410 aa9.83□□□□□ -0.84
ALMS1-208ENST00000620466 CCDC112Q8NEF3 446 aa9.83□□□□□ -0.84
ALMS1-208ENST00000620466 BOLA2Q9H3K6 86 aa9.83□□□□□ -0.84
ALMS1-208ENST00000620466 ANKRD44Q8N8A2 993 aa9.83□□□□□ -0.84
ALMS1-208ENST00000620466 TMX3Q96JJ7 454 aa9.83□□□□□ -0.84
ALMS1-208ENST00000620466 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.83□□□□□ -0.84
ALMS1-208ENST00000620466 SH2B1Q9NRF2 756 aaPredicted RBP9.83□□□□□ -0.84
ALMS1-208ENST00000620466 GJB2P29033 226 aa9.83□□□□□ -0.84
ALMS1-208ENST00000620466 PROSER2Q86WR7 435 aaPredicted RBP9.83□□□□□ -0.84
ALMS1-208ENST00000620466 ZFYVE9O95405 1425 aa9.83□□□□□ -0.84
ALMS1-208ENST00000620466 SERPINC1P01008 464 aa9.83□□□□□ -0.84
ALMS1-208ENST00000620466 FKBP4Q02790 459 aaKnown RBP eCLIP9.83□□□□□ -0.84
ALMS1-208ENST00000620466 SMC5Q8IY18 1101 aa9.83□□□□□ -0.84
ALMS1-208ENST00000620466 ACEP12821 1306 aa9.83□□□□□ -0.84
ALMS1-208ENST00000620466 POLKQ9UBT6 870 aa9.82□□□□□ -0.84
ALMS1-208ENST00000620466 ATP2B1P20020 1258 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms