RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 PDE1AP54750 535 aa16.58■□□□□ 0.24
CNOT3-210ENST00000618939 NFXL1Q6ZNB6 911 aa16.58■□□□□ 0.24
CNOT3-210ENST00000618939 FBXW7Q969H0 707 aa16.58■□□□□ 0.24
CNOT3-210ENST00000618939 TPM2P07951 284 aa16.57■□□□□ 0.24
CNOT3-210ENST00000618939 IL13P35225 146 aa16.57■□□□□ 0.24
CNOT3-210ENST00000618939 UGGT1Q9NYU2 1555 aa16.57■□□□□ 0.24
CNOT3-210ENST00000618939 PPP1R42Q7Z4L9 355 aa16.57■□□□□ 0.24
CNOT3-210ENST00000618939 RBM33Q96EV2 1170 aaKnown RBP16.57■□□□□ 0.24
CNOT3-210ENST00000618939 SDF4Q9BRK5 362 aa16.57■□□□□ 0.24
CNOT3-210ENST00000618939 MYOM2P54296 1465 aa16.57■□□□□ 0.24
CNOT3-210ENST00000618939 CEP85Q6P2H3 762 aa16.57■□□□□ 0.24
CNOT3-210ENST00000618939 FOXO3O43524 673 aa16.57■□□□□ 0.24
CNOT3-210ENST00000618939 PRPF40BQ6NWY9 871 aaKnown RBP16.57■□□□□ 0.24
CNOT3-210ENST00000618939 ZSCAN30Q86W11 494 aa16.57■□□□□ 0.24
CNOT3-210ENST00000618939 MTHFSDQ2M296 383 aaKnown RBP16.56■□□□□ 0.24
CNOT3-210ENST00000618939 TRIM5Q9C035 493 aa16.56■□□□□ 0.24
CNOT3-210ENST00000618939 TPM3P06753 285 aa16.56■□□□□ 0.24
CNOT3-210ENST00000618939 CCDC192P0DO97 292 aa16.56■□□□□ 0.24
CNOT3-210ENST00000618939 KLHL40Q2TBA0 621 aa16.56■□□□□ 0.24
CNOT3-210ENST00000618939 VSIG10Q8N0Z9 540 aa16.56■□□□□ 0.24
CNOT3-210ENST00000618939 PLXNC1O60486 1568 aa16.56■□□□□ 0.24
CNOT3-210ENST00000618939 PI4KAP2A4QPH2 592 aa16.56■□□□□ 0.24
CNOT3-210ENST00000618939 PLEKHM2Q8IWE5 1019 aa16.56■□□□□ 0.24
CNOT3-210ENST00000618939 PI4KAP1Q8N8J0 262 aa16.56■□□□□ 0.24
CNOT3-210ENST00000618939 LARP1Q6PKG0 1096 aaKnown RBP16.55■□□□□ 0.24
CNOT3-210ENST00000618939 CCDC83Q8IWF9 413 aa16.55■□□□□ 0.24
CNOT3-210ENST00000618939 MPNDQ8N594 471 aa16.55■□□□□ 0.24
CNOT3-210ENST00000618939 TULP1O00294 542 aaPredicted RBP16.55■□□□□ 0.24
CNOT3-210ENST00000618939 KINO60870 393 aaKnown RBP16.55■□□□□ 0.24
CNOT3-210ENST00000618939 CREBRFQ8IUR6 639 aa16.55■□□□□ 0.24
CNOT3-210ENST00000618939 EDC4Q6P2E9 1401 aaKnown RBP16.54■□□□□ 0.24
CNOT3-210ENST00000618939 XRCC6P12956 609 aaKnown RBP eCLIP16.54■□□□□ 0.24
CNOT3-210ENST00000618939 CEBPZQ03701 1054 aaKnown RBP16.54■□□□□ 0.24
CNOT3-210ENST00000618939 FLT4P35916 1363 aa16.54■□□□□ 0.24
CNOT3-210ENST00000618939 KRT32Q14532 448 aa16.54■□□□□ 0.24
CNOT3-210ENST00000618939 BOLA2Q9H3K6 86 aa16.54■□□□□ 0.24
CNOT3-210ENST00000618939 TRPM1Q7Z4N2 1603 aa16.54■□□□□ 0.24
CNOT3-210ENST00000618939 IQGAP3Q86VI3 1631 aa16.53■□□□□ 0.24
CNOT3-210ENST00000618939 LIMCH1Q9UPQ0 1083 aa16.53■□□□□ 0.24
CNOT3-210ENST00000618939 ANXA1P04083 346 aa16.53■□□□□ 0.24
CNOT3-210ENST00000618939 RBM25P49756 843 aaKnown RBP16.53■□□□□ 0.24
CNOT3-210ENST00000618939 CCDC158Q5M9N0 1113 aa16.53■□□□□ 0.24
CNOT3-210ENST00000618939 ECHDC1Q9NTX5 307 aa16.53■□□□□ 0.24
CNOT3-210ENST00000618939 TOM1L2Q6ZVM7 507 aa16.53■□□□□ 0.24
CNOT3-210ENST00000618939 TNMDQ9H2S6 317 aa16.53■□□□□ 0.24
CNOT3-210ENST00000618939 RHPN1Q8TCX5 695 aa16.52■□□□□ 0.24
CNOT3-210ENST00000618939 DDX54Q8TDD1 881 aaKnown RBP16.52■□□□□ 0.24
CNOT3-210ENST00000618939 TMX3Q96JJ7 454 aa16.52■□□□□ 0.24
CNOT3-210ENST00000618939 CCDC8Q9H0W5 538 aaPredicted RBP16.52■□□□□ 0.24
CNOT3-210ENST00000618939 PDIA4P13667 645 aaKnown RBP16.52■□□□□ 0.24
CNOT3-210ENST00000618939 ATP8B2P98198 1209 aa16.52■□□□□ 0.24
CNOT3-210ENST00000618939 FERMT3Q86UX7 667 aa16.52■□□□□ 0.24
CNOT3-210ENST00000618939 NAT10Q9H0A0 1025 aaKnown RBP16.52■□□□□ 0.24
CNOT3-210ENST00000618939 HYPKQ9NX55 129 aa16.52■□□□□ 0.24
CNOT3-210ENST00000618939 SAFBQ15424 915 aaKnown RBP eCLIP16.52■□□□□ 0.23
CNOT3-210ENST00000618939 ZNF396Q96N95 335 aaPredicted RBP16.51■□□□□ 0.23
CNOT3-210ENST00000618939 ESYT1Q9BSJ8 1104 aa16.51■□□□□ 0.23
CNOT3-210ENST00000618939 CROCC2H7BZ55 1655 aa16.51■□□□□ 0.23
CNOT3-210ENST00000618939 ERICH2A1L162 156 aa16.51■□□□□ 0.23
CNOT3-210ENST00000618939 DHX16O60231 1041 aaKnown RBP16.51■□□□□ 0.23
CNOT3-210ENST00000618939 RAB3GAP1Q15042 981 aa16.51■□□□□ 0.23
CNOT3-210ENST00000618939 KIF6Q6ZMV9 814 aa16.51■□□□□ 0.23
CNOT3-210ENST00000618939 SPC24Q8NBT2 197 aa16.51■□□□□ 0.23
CNOT3-210ENST00000618939 SH2B1Q9NRF2 756 aaPredicted RBP16.51■□□□□ 0.23
CNOT3-210ENST00000618939 STRN4Q9NRL3 753 aa16.51■□□□□ 0.23
CNOT3-210ENST00000618939 MAP3K19Q56UN5 1328 aa16.51■□□□□ 0.23
CNOT3-210ENST00000618939 TPD52L1Q16890 204 aaPredicted RBP16.51■□□□□ 0.23
CNOT3-210ENST00000618939 SPATA32Q96LK8 384 aa16.51■□□□□ 0.23
CNOT3-210ENST00000618939 TTC39AQ5SRH9 613 aa16.51■□□□□ 0.23
CNOT3-210ENST00000618939 PANK2Q9BZ23 570 aa16.51■□□□□ 0.23
CNOT3-210ENST00000618939 PRDM11Q9NQV5 511 aa16.51■□□□□ 0.23
CNOT3-210ENST00000618939 TBC1D2BQ9UPU7 963 aa16.51■□□□□ 0.23
CNOT3-210ENST00000618939 MAP3K2Q9Y2U5 619 aa16.51■□□□□ 0.23
CNOT3-210ENST00000618939 EYA1Q99502 592 aa16.5■□□□□ 0.23
CNOT3-210ENST00000618939 MYD88Q99836 296 aa16.5■□□□□ 0.23
CNOT3-210ENST00000618939 HOOK1Q9UJC3 728 aaKnown RBP16.5■□□□□ 0.23
CNOT3-210ENST00000618939 GDPD2Q9HCC8 539 aa16.5■□□□□ 0.23
CNOT3-210ENST00000618939 VPS37DQ86XT2 251 aa16.49■□□□□ 0.23
CNOT3-210ENST00000618939 LARP6Q9BRS8 491 aaKnown RBP16.49■□□□□ 0.23
CNOT3-210ENST00000618939 NUP62CLQ9H1M0 184 aa16.49■□□□□ 0.23
CNOT3-210ENST00000618939 CEP126Q9P2H0 1117 aa16.49■□□□□ 0.23
CNOT3-210ENST00000618939 ZMYM3Q14202 1370 aa16.49■□□□□ 0.23
CNOT3-210ENST00000618939 STK38Q15208 465 aa16.49■□□□□ 0.23
CNOT3-210ENST00000618939 CCDC57Q2TAC2 916 aa16.49■□□□□ 0.23
CNOT3-210ENST00000618939 CHPF2Q9P2E5 772 aa16.49■□□□□ 0.23
CNOT3-210ENST00000618939 HMGN5P82970 282 aaKnown RBP16.49■□□□□ 0.23
CNOT3-210ENST00000618939 MAP7D2Q96T17 732 aa16.48■□□□□ 0.23
CNOT3-210ENST00000618939 UNC13BO14795 1591 aa16.48■□□□□ 0.23
CNOT3-210ENST00000618939 NEO1Q92859 1461 aa16.48■□□□□ 0.23
CNOT3-210ENST00000618939 ZCCHC11Q5TAX3 1644 aaKnown RBP16.48■□□□□ 0.23
CNOT3-210ENST00000618939 ZFYVE16Q7Z3T8 1539 aa16.48■□□□□ 0.23
CNOT3-210ENST00000618939 CHL1O00533 1208 aa16.48■□□□□ 0.23
CNOT3-210ENST00000618939 HOMER1Q86YM7 354 aa16.48■□□□□ 0.23
CNOT3-210ENST00000618939 MSH6P52701 1360 aa16.48■□□□□ 0.23
CNOT3-210ENST00000618939 ANAPC15P60006 121 aa16.48■□□□□ 0.23
CNOT3-210ENST00000618939 FKBP4Q02790 459 aaKnown RBP eCLIP16.48■□□□□ 0.23
CNOT3-210ENST00000618939 EVI5LQ96CN4 794 aa16.48■□□□□ 0.23
CNOT3-210ENST00000618939 PLEKHF1Q96S99 279 aa16.48■□□□□ 0.23
CNOT3-210ENST00000618939 CCDC183Q5T5S1 534 aa16.48■□□□□ 0.23
CNOT3-210ENST00000618939 CNNM1Q9NRU3 951 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms