RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 TOGARAM1Q9Y4F4 1720 aa20.64■□□□□ 0.89
MALAT1-213ENST00000618227 NHSQ6T4R5 1651 aa20.64■□□□□ 0.89
MALAT1-213ENST00000618227 CHL1O00533 1208 aa20.63■□□□□ 0.89
MALAT1-213ENST00000618227 ZNF853P0CG23 659 aa20.63■□□□□ 0.89
MALAT1-213ENST00000618227 GNAI1P63096 354 aa20.63■□□□□ 0.89
MALAT1-213ENST00000618227 SYTL4Q96C24 671 aaPredicted RBP20.63■□□□□ 0.89
MALAT1-213ENST00000618227 ZBED9Q6R2W3 1325 aa20.62■□□□□ 0.89
MALAT1-213ENST00000618227 THUMPD2Q9BTF0 503 aaKnown RBP20.62■□□□□ 0.89
MALAT1-213ENST00000618227 DOT1LQ8TEK3 1739 aa20.61■□□□□ 0.89
MALAT1-213ENST00000618227 BTBD11A6QL63 1104 aa20.61■□□□□ 0.89
MALAT1-213ENST00000618227 TRIM37O94972 964 aa20.61■□□□□ 0.89
MALAT1-213ENST00000618227 SBF2Q86WG5 1849 aa20.61■□□□□ 0.89
MALAT1-213ENST00000618227 PLSCR1O15162 318 aa20.6■□□□□ 0.89
MALAT1-213ENST00000618227 HMGB2P26583 209 aaKnown RBP20.6■□□□□ 0.89
MALAT1-213ENST00000618227 GOLGA2Q08379 1002 aa20.6■□□□□ 0.89
MALAT1-213ENST00000618227 SALL2Q9Y467 1007 aaPredicted RBP20.6■□□□□ 0.89
MALAT1-213ENST00000618227 ZNF790Q6PG37 636 aa20.59■□□□□ 0.89
MALAT1-213ENST00000618227 ATG3Q9NT62 314 aa20.59■□□□□ 0.89
MALAT1-213ENST00000618227 SIPA1L3O60292 1781 aaPredicted RBP20.59■□□□□ 0.89
MALAT1-213ENST00000618227 ITGB4P16144 1822 aa20.58■□□□□ 0.89
MALAT1-213ENST00000618227 ILDR2Q71H61 639 aa20.58■□□□□ 0.89
MALAT1-213ENST00000618227 E9PSI1 815 aa20.57■□□□□ 0.88
MALAT1-213ENST00000618227 MYH16Q9H6N6 1097 aa20.57■□□□□ 0.88
MALAT1-213ENST00000618227 TSPYL4Q9UJ04 414 aa20.57■□□□□ 0.88
MALAT1-213ENST00000618227 ASAP1Q9ULH1 1129 aa20.57■□□□□ 0.88
MALAT1-213ENST00000618227 VIRMAQ69YN4 1812 aaKnown RBP20.56■□□□□ 0.88
MALAT1-213ENST00000618227 SF3B2Q13435 895 aaKnown RBP20.56■□□□□ 0.88
MALAT1-213ENST00000618227 PTF1AQ7RTS3 328 aa20.56■□□□□ 0.88
MALAT1-213ENST00000618227 TTC5Q8N0Z6 440 aa20.56■□□□□ 0.88
MALAT1-213ENST00000618227 VSIG10Q8N0Z9 540 aa20.56■□□□□ 0.88
MALAT1-213ENST00000618227 SENP3-EIF4A1A0A087X0R7 540 aa20.55■□□□□ 0.88
MALAT1-213ENST00000618227 TRMT2AQ8IZ69 625 aaKnown RBP20.55■□□□□ 0.88
MALAT1-213ENST00000618227 APBA3O96018 575 aa20.54■□□□□ 0.88
MALAT1-213ENST00000618227 SLFN5Q08AF3 891 aa20.54■□□□□ 0.88
MALAT1-213ENST00000618227 MBIPQ9NS73 344 aa20.54■□□□□ 0.88
MALAT1-213ENST00000618227 SOS1Q07889 1333 aaPredicted RBP20.53■□□□□ 0.88
MALAT1-213ENST00000618227 SLC39A6Q13433 755 aa20.53■□□□□ 0.88
MALAT1-213ENST00000618227 FMNL2Q96PY5 1086 aa20.53■□□□□ 0.88
MALAT1-213ENST00000618227 PALLDQ8WX93 1383 aa20.53■□□□□ 0.88
MALAT1-213ENST00000618227 HEG1Q9ULI3 1381 aa20.53■□□□□ 0.88
MALAT1-213ENST00000618227 PAPPAQ13219 1627 aa20.53■□□□□ 0.88
MALAT1-213ENST00000618227 BAG6P46379 1132 aa20.52■□□□□ 0.88
MALAT1-213ENST00000618227 EIF4A1P60842 406 aaKnown RBP20.52■□□□□ 0.88
MALAT1-213ENST00000618227 SLC27A3Q5K4L6 730 aa20.52■□□□□ 0.88
MALAT1-213ENST00000618227 UPF1Q92900 1129 aaKnown RBP eCLIP20.52■□□□□ 0.88
MALAT1-213ENST00000618227 TEX13AQ9BXU3 409 aaPredicted RBP20.52■□□□□ 0.88
MALAT1-213ENST00000618227 MIS18AQ9NYP9 233 aa20.52■□□□□ 0.88
MALAT1-213ENST00000618227 LAS1LQ9Y4W2 734 aaKnown RBP20.52■□□□□ 0.88
MALAT1-213ENST00000618227 BTAF1O14981 1849 aa20.52■□□□□ 0.88
MALAT1-213ENST00000618227 KAT6BQ8WYB5 2073 aa20.52■□□□□ 0.87
MALAT1-213ENST00000618227 HOXB7P09629 217 aa20.51■□□□□ 0.87
MALAT1-213ENST00000618227 ZNF496Q96IT1 587 aaPredicted RBP20.51■□□□□ 0.87
MALAT1-213ENST00000618227 CHMP4AQ9BY43 222 aa20.51■□□□□ 0.87
MALAT1-213ENST00000618227 SPINK5Q9NQ38 1064 aaPredicted RBP20.51■□□□□ 0.87
MALAT1-213ENST00000618227 LOC102724428A0A0B4J2F2 783 aa20.5■□□□□ 0.87
MALAT1-213ENST00000618227 SIK1P57059 783 aa20.5■□□□□ 0.87
MALAT1-213ENST00000618227 TNS1Q9HBL0 1735 aaKnown RBP20.5■□□□□ 0.87
MALAT1-213ENST00000618227 KDM3BQ7LBC6 1761 aa20.49■□□□□ 0.87
MALAT1-213ENST00000618227 KCPQ6ZWJ8 1503 aa20.49■□□□□ 0.87
MALAT1-213ENST00000618227 KCNQ3O43525 872 aa20.49■□□□□ 0.87
MALAT1-213ENST00000618227 SNRPA1P09661 255 aaKnown RBP20.49■□□□□ 0.87
MALAT1-213ENST00000618227 CAMKK2Q96RR4 588 aa20.49■□□□□ 0.87
MALAT1-213ENST00000618227 FANCIQ9NVI1 1328 aa20.49■□□□□ 0.87
MALAT1-213ENST00000618227 RGPD3A6NKT7 1758 aaPredicted RBP20.49■□□□□ 0.87
MALAT1-213ENST00000618227 RGPD4Q7Z3J3 1758 aa20.49■□□□□ 0.87
MALAT1-213ENST00000618227 ZNF831Q5JPB2 1677 aa20.48■□□□□ 0.87
MALAT1-213ENST00000618227 PTCD1O75127 700 aaKnown RBP20.48■□□□□ 0.87
MALAT1-213ENST00000618227 UBR2Q8IWV8 1755 aa20.48■□□□□ 0.87
MALAT1-213ENST00000618227 GIGYF1O75420 1035 aaPredicted RBP20.47■□□□□ 0.87
MALAT1-213ENST00000618227 DUSP27Q5VZP5 1158 aa20.47■□□□□ 0.87
MALAT1-213ENST00000618227 CDCA7LQ96GN5 454 aa20.47■□□□□ 0.87
MALAT1-213ENST00000618227 RBM42Q9BTD8 480 aaKnown RBP20.47■□□□□ 0.87
MALAT1-213ENST00000618227 EP400Q96L91 3159 aa20.46■□□□□ 0.87
MALAT1-213ENST00000618227 TXNRD1Q16881 649 aa20.46■□□□□ 0.87
MALAT1-213ENST00000618227 TSR2Q969E8 191 aaKnown RBP20.46■□□□□ 0.87
MALAT1-213ENST00000618227 CT47B1P0C2W7 299 aaPredicted RBP20.45■□□□□ 0.86
MALAT1-213ENST00000618227 ATP6V1AP38606 617 aa20.45■□□□□ 0.86
MALAT1-213ENST00000618227 PROM2Q8N271 834 aa20.45■□□□□ 0.86
MALAT1-213ENST00000618227 SLC4A9Q96Q91 983 aa20.45■□□□□ 0.86
MALAT1-213ENST00000618227 CCNL1Q9UK58 526 aaPredicted RBP20.45■□□□□ 0.86
MALAT1-213ENST00000618227 CICQ96RK0 1608 aaPredicted RBP20.45■□□□□ 0.86
MALAT1-213ENST00000618227 LY75O60449 1722 aa20.44■□□□□ 0.86
MALAT1-213ENST00000618227 STARD3NLO95772 234 aa20.43■□□□□ 0.86
MALAT1-213ENST00000618227 EN1Q05925 392 aaPredicted RBP20.43■□□□□ 0.86
MALAT1-213ENST00000618227 RC3H1Q5TC82 1133 aaKnown RBP20.43■□□□□ 0.86
MALAT1-213ENST00000618227 ZNF428Q96B54 188 aa20.43■□□□□ 0.86
MALAT1-213ENST00000618227 C8orf58Q8NAV2 365 aa20.42■□□□□ 0.86
MALAT1-213ENST00000618227 YTHDC1Q96MU7 727 aaKnown RBP20.42■□□□□ 0.86
MALAT1-213ENST00000618227 EXOSC9Q06265 439 aaKnown RBP20.41■□□□□ 0.86
MALAT1-213ENST00000618227 LRRC4BQ9NT99 713 aa20.41■□□□□ 0.86
MALAT1-213ENST00000618227 ERBB4Q15303 1308 aa20.41■□□□□ 0.86
MALAT1-213ENST00000618227 CYP19A1P11511 503 aaPredicted RBP20.4■□□□□ 0.86
MALAT1-213ENST00000618227 ITPK1Q13572 414 aa20.4■□□□□ 0.86
MALAT1-213ENST00000618227 EZH2Q15910 746 aaKnown RBP20.4■□□□□ 0.86
MALAT1-213ENST00000618227 TWISTNBQ3B726 338 aaPredicted RBP20.4■□□□□ 0.86
MALAT1-213ENST00000618227 DEFB132Q7Z7B7 95 aa20.4■□□□□ 0.86
MALAT1-213ENST00000618227 DNAJC10Q8IXB1 793 aa20.4■□□□□ 0.86
MALAT1-213ENST00000618227 CNTNAP4Q9C0A0 1308 aa20.39■□□□□ 0.85
MALAT1-213ENST00000618227 VAMP4O75379 141 aa20.39■□□□□ 0.85
MALAT1-213ENST00000618227 ADRA2BP18089 450 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms