RNA–Protein interactions for RNA: ENST00000616983.4

GYPA-212, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GYPA, Length 2,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-212ENST00000616983 PDE3BQ13370 1112 aa7.51□□□□□ -1.21
GYPA-212ENST00000616983 SERINC3Q13530 473 aa7.51□□□□□ -1.21
GYPA-212ENST00000616983 INO80BQ9C086 356 aaPredicted RBP7.51□□□□□ -1.21
GYPA-212ENST00000616983 IFRD1O00458 451 aaPredicted RBP7.51□□□□□ -1.21
GYPA-212ENST00000616983 SORBS3O60504 671 aa7.51□□□□□ -1.21
GYPA-212ENST00000616983 MAN1A1P33908 653 aa7.51□□□□□ -1.21
GYPA-212ENST00000616983 TRPC6Q9Y210 931 aa7.51□□□□□ -1.21
GYPA-212ENST00000616983 TNFRSF10BO14763 440 aa7.5□□□□□ -1.21
GYPA-212ENST00000616983 KIF3BO15066 747 aa7.5□□□□□ -1.21
GYPA-212ENST00000616983 VPS72Q15906 364 aa7.5□□□□□ -1.21
GYPA-212ENST00000616983 EPS8L1Q8TE68 723 aa7.5□□□□□ -1.21
GYPA-212ENST00000616983 PAGR1Q9BTK6 254 aa7.5□□□□□ -1.21
GYPA-212ENST00000616983 AVENQ9NQS1 362 aaPredicted RBP7.5□□□□□ -1.21
GYPA-212ENST00000616983 RASA1P20936 1047 aa7.5□□□□□ -1.21
GYPA-212ENST00000616983 FERMT3Q86UX7 667 aa7.5□□□□□ -1.21
GYPA-212ENST00000616983 NUTM1Q86Y26 1132 aa7.5□□□□□ -1.21
GYPA-212ENST00000616983 MKL1Q969V6 931 aa7.5□□□□□ -1.21
GYPA-212ENST00000616983 CASS4Q9NQ75 786 aa7.5□□□□□ -1.21
GYPA-212ENST00000616983 PRMT3O60678 531 aa7.49□□□□□ -1.21
GYPA-212ENST00000616983 PHF14O94880 888 aa7.49□□□□□ -1.21
GYPA-212ENST00000616983 CD46P15529 392 aa7.49□□□□□ -1.21
GYPA-212ENST00000616983 POU5F1Q01860 360 aaKnown RBP7.49□□□□□ -1.21
GYPA-212ENST00000616983 FMR1Q06787 632 aaKnown RBP eCLIP7.49□□□□□ -1.21
GYPA-212ENST00000616983 CBLBQ13191 982 aa7.49□□□□□ -1.21
GYPA-212ENST00000616983 TTC39BQ5VTQ0 682 aaPredicted RBP7.49□□□□□ -1.21
GYPA-212ENST00000616983 SAMD3Q8N6K7 520 aa7.49□□□□□ -1.21
GYPA-212ENST00000616983 NAP1L2Q9ULW6 460 aaPredicted RBP7.49□□□□□ -1.21
GYPA-212ENST00000616983 ADGRG1Q9Y653 693 aa7.49□□□□□ -1.21
GYPA-212ENST00000616983 DAB2P98082 770 aa7.49□□□□□ -1.21
GYPA-212ENST00000616983 NBPF6Q5VWK0 638 aa7.49□□□□□ -1.21
GYPA-212ENST00000616983 CDAN1Q8IWY9 1227 aa7.49□□□□□ -1.21
GYPA-212ENST00000616983 LRRN4Q8WUT4 740 aa7.49□□□□□ -1.21
GYPA-212ENST00000616983 NBPF4Q96M43 638 aa7.49□□□□□ -1.21
GYPA-212ENST00000616983 MPHOSPH6Q99547 160 aaKnown RBP7.49□□□□□ -1.21
GYPA-212ENST00000616983 PLIN1O60240 522 aa7.48□□□□□ -1.21
GYPA-212ENST00000616983 SKIP12755 728 aa7.48□□□□□ -1.21
GYPA-212ENST00000616983 FAM193AP78312 1265 aa7.48□□□□□ -1.21
GYPA-212ENST00000616983 ZRSR2Q15696 482 aaKnown RBP7.48□□□□□ -1.21
GYPA-212ENST00000616983 EFCAB2Q5VUJ9 269 aa7.48□□□□□ -1.21
GYPA-212ENST00000616983 ICE2Q659A1 982 aa7.48□□□□□ -1.21
GYPA-212ENST00000616983 VPS37DQ86XT2 251 aa7.48□□□□□ -1.21
GYPA-212ENST00000616983 DEPDC4Q8N2C3 294 aa7.48□□□□□ -1.21
GYPA-212ENST00000616983 TSR2Q969E8 191 aaKnown RBP7.48□□□□□ -1.21
GYPA-212ENST00000616983 DUSP9Q99956 384 aaKnown RBP7.48□□□□□ -1.21
GYPA-212ENST00000616983 ZBTB3Q9H5J0 574 aa7.48□□□□□ -1.21
GYPA-212ENST00000616983 ANO8Q9HCE9 1232 aaPredicted RBP7.48□□□□□ -1.21
GYPA-212ENST00000616983 DDX41Q9UJV9 622 aaKnown RBP7.48□□□□□ -1.21
GYPA-212ENST00000616983 TPX2Q9ULW0 747 aaKnown RBP7.48□□□□□ -1.21
GYPA-212ENST00000616983 MAP3K13O43283 966 aa7.48□□□□□ -1.21
GYPA-212ENST00000616983 PRPF40AO75400 957 aaKnown RBP7.48□□□□□ -1.21
GYPA-212ENST00000616983 ZRANB2O95218 330 aaKnown RBP eCLIP7.48□□□□□ -1.21
GYPA-212ENST00000616983 EN1Q05925 392 aaPredicted RBP7.48□□□□□ -1.21
GYPA-212ENST00000616983 HDAC1Q13547 482 aaPredicted RBP7.48□□□□□ -1.21
GYPA-212ENST00000616983 TMC7Q7Z402 723 aa7.48□□□□□ -1.21
GYPA-212ENST00000616983 SLKQ9H2G2 1235 aaPredicted RBP7.48□□□□□ -1.21
GYPA-212ENST00000616983 VTI1BQ9UEU0 232 aa7.48□□□□□ -1.21
GYPA-212ENST00000616983 FKBP4Q02790 459 aaKnown RBP eCLIP7.47□□□□□ -1.21
GYPA-212ENST00000616983 UPF1Q92900 1129 aaKnown RBP eCLIP7.47□□□□□ -1.21
GYPA-212ENST00000616983 CEP89Q96ST8 783 aa7.47□□□□□ -1.21
GYPA-212ENST00000616983 RBCK1Q9BYM8 510 aa7.47□□□□□ -1.21
GYPA-212ENST00000616983 RNF19AQ9NV58 838 aa7.47□□□□□ -1.21
GYPA-212ENST00000616983 CXXC1Q9P0U4 656 aaPredicted RBP7.47□□□□□ -1.21
GYPA-212ENST00000616983 COLQQ9Y215 455 aaPredicted RBP7.47□□□□□ -1.21
GYPA-212ENST00000616983 COL6A1P12109 1028 aa7.47□□□□□ -1.21
GYPA-212ENST00000616983 RACK1P63244 317 aaKnown RBP7.47□□□□□ -1.21
GYPA-212ENST00000616983 MAPRE1Q15691 268 aaKnown RBP7.47□□□□□ -1.21
GYPA-212ENST00000616983 OCLNQ16625 522 aa7.47□□□□□ -1.21
GYPA-212ENST00000616983 PNMA1Q8ND90 353 aa7.47□□□□□ -1.21
GYPA-212ENST00000616983 ATP5J2-PTCD1G3V325 749 aa7.46□□□□□ -1.21
GYPA-212ENST00000616983 TREHO43280 583 aa7.46□□□□□ -1.21
GYPA-212ENST00000616983 CAND2O75155 1236 aa7.46□□□□□ -1.21
GYPA-212ENST00000616983 FMNL1O95466 1100 aaPredicted RBP7.46□□□□□ -1.21
GYPA-212ENST00000616983 LDHBP07195 334 aaKnown RBP7.46□□□□□ -1.21
GYPA-212ENST00000616983 DPYDQ12882 1025 aa7.46□□□□□ -1.21
GYPA-212ENST00000616983 RAVER1Q8IY67 606 aaKnown RBP7.46□□□□□ -1.21
GYPA-212ENST00000616983 ZNF654Q8IZM8 581 aa7.46□□□□□ -1.21
GYPA-212ENST00000616983 C1orf131Q8NDD1 294 aaKnown RBP7.46□□□□□ -1.21
GYPA-212ENST00000616983 GTF3C2Q8WUA4 911 aaPredicted RBP7.46□□□□□ -1.21
GYPA-212ENST00000616983 C12orf49Q9H741 205 aa7.46□□□□□ -1.21
GYPA-212ENST00000616983 ANAPC4Q9UJX5 808 aa7.46□□□□□ -1.21
GYPA-212ENST00000616983 RPGRIP1LQ68CZ1 1315 aa7.46□□□□□ -1.22
GYPA-212ENST00000616983 NOS2P35228 1153 aa7.46□□□□□ -1.22
GYPA-212ENST00000616983 SF3B2Q13435 895 aaKnown RBP7.46□□□□□ -1.22
GYPA-212ENST00000616983 CKAP2LQ8IYA6 745 aa7.46□□□□□ -1.22
GYPA-212ENST00000616983 PPM1EQ8WY54 764 aa7.46□□□□□ -1.22
GYPA-212ENST00000616983 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.46□□□□□ -1.221e-6■□□□□ 8.2
GYPA-212ENST00000616983 DNMT3AQ9Y6K1 912 aaPredicted RBP7.46□□□□□ -1.22
GYPA-212ENST00000616983 SEC24BO95487 1268 aa7.45□□□□□ -1.22
GYPA-212ENST00000616983 USP5P45974 858 aa7.45□□□□□ -1.22
GYPA-212ENST00000616983 SVIPQ8NHG7 77 aa7.45□□□□□ -1.22
GYPA-212ENST00000616983 ARPC5LQ9BPX5 153 aa7.45□□□□□ -1.22
GYPA-212ENST00000616983 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.45□□□□□ -1.225e-6■■■□□ 18.6
GYPA-212ENST00000616983 EMILIN1Q9Y6C2 1016 aa7.45□□□□□ -1.22
GYPA-212ENST00000616983 TTLL13PA6NNM8 815 aa7.45□□□□□ -1.22
GYPA-212ENST00000616983 NRDCO43847 1150 aa7.45□□□□□ -1.22
GYPA-212ENST00000616983 SYCP2LQ5T4T6 812 aa7.45□□□□□ -1.22
GYPA-212ENST00000616983 IPO4Q8TEX9 1081 aaKnown RBP7.45□□□□□ -1.22
GYPA-212ENST00000616983 RASSF7Q02833 373 aa7.44□□□□□ -1.22
GYPA-212ENST00000616983 PSMD2Q13200 908 aa7.44□□□□□ -1.22
GYPA-212ENST00000616983 ZNF394Q53GI3 561 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms