RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 PIBF1Q8WXW3 757 aa15.85■□□□□ 0.13
MSH6-214ENST00000616033 TMEM51Q9NW97 253 aa15.85■□□□□ 0.13
MSH6-214ENST00000616033 INO80Q9ULG1 1556 aaPredicted RBP15.85■□□□□ 0.13
MSH6-214ENST00000616033 TAF7LQ5H9L4 462 aa15.85■□□□□ 0.13
MSH6-214ENST00000616033 TSPOAP1O95153 1857 aa15.85■□□□□ 0.13
MSH6-214ENST00000616033 SBNO2Q9Y2G9 1366 aa15.85■□□□□ 0.13
MSH6-214ENST00000616033 HMMRO75330 724 aa15.85■□□□□ 0.13
MSH6-214ENST00000616033 CEBPAP49715 358 aaPredicted RBP15.85■□□□□ 0.13
MSH6-214ENST00000616033 FAM173BQ6P4H8 233 aa15.85■□□□□ 0.13
MSH6-214ENST00000616033 ESYT1Q9BSJ8 1104 aa15.85■□□□□ 0.13
MSH6-214ENST00000616033 RPAP2Q8IXW5 612 aaPredicted RBP15.84■□□□□ 0.13
MSH6-214ENST00000616033 ARAP3Q8WWN8 1544 aa15.84■□□□□ 0.13
MSH6-214ENST00000616033 KCNJ4P48050 445 aa15.84■□□□□ 0.13
MSH6-214ENST00000616033 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.84■□□□□ 0.13
MSH6-214ENST00000616033 V9GYY5 206 aaPredicted RBP15.84■□□□□ 0.13
MSH6-214ENST00000616033 HMGN5P82970 282 aaKnown RBP15.84■□□□□ 0.13
MSH6-214ENST00000616033 CKAP2LQ8IYA6 745 aa15.83■□□□□ 0.13
MSH6-214ENST00000616033 IL25Q9H293 177 aa15.83■□□□□ 0.13
MSH6-214ENST00000616033 ERICH4A6NGS2 130 aa15.83■□□□□ 0.12
MSH6-214ENST00000616033 FBXW7Q969H0 707 aa15.83■□□□□ 0.12
MSH6-214ENST00000616033 SPG7Q9UQ90 795 aa15.83■□□□□ 0.12
MSH6-214ENST00000616033 DNM1Q05193 864 aaKnown RBP15.82■□□□□ 0.12
MSH6-214ENST00000616033 FKBP5Q13451 457 aaPredicted RBP15.82■□□□□ 0.12
MSH6-214ENST00000616033 CHMP4CQ96CF2 233 aa15.82■□□□□ 0.12
MSH6-214ENST00000616033 QRICH2Q9H0J4 1663 aa15.82■□□□□ 0.12
MSH6-214ENST00000616033 NSD2O96028 1365 aa15.82■□□□□ 0.12
MSH6-214ENST00000616033 MX1P20591 662 aa15.82■□□□□ 0.12
MSH6-214ENST00000616033 CCDC83Q8IWF9 413 aa15.82■□□□□ 0.12
MSH6-214ENST00000616033 SMC3Q9UQE7 1217 aa15.82■□□□□ 0.12
MSH6-214ENST00000616033 WDR33Q9C0J8 1336 aaKnown RBP15.82■□□□□ 0.12
MSH6-214ENST00000616033 FOXO3O43524 673 aa15.81■□□□□ 0.12
MSH6-214ENST00000616033 PTGS1P23219 599 aa15.81■□□□□ 0.12
MSH6-214ENST00000616033 CCDC183Q5T5S1 534 aa15.81■□□□□ 0.12
MSH6-214ENST00000616033 LRMPQ12912 555 aa15.81■□□□□ 0.12
MSH6-214ENST00000616033 PNMA6EA0A0J9YXQ4 647 aa15.81■□□□□ 0.12
MSH6-214ENST00000616033 CWC27Q6UX04 472 aaKnown RBP15.81■□□□□ 0.12
MSH6-214ENST00000616033 TAOK2Q9UL54 1235 aa15.81■□□□□ 0.12
MSH6-214ENST00000616033 TCHHQ07283 1943 aa15.8■□□□□ 0.12
MSH6-214ENST00000616033 IPO4Q8TEX9 1081 aaKnown RBP15.8■□□□□ 0.12
MSH6-214ENST00000616033 LRRCC1Q9C099 1032 aa15.8■□□□□ 0.12
MSH6-214ENST00000616033 MLH3Q9UHC1 1453 aa15.8■□□□□ 0.12
MSH6-214ENST00000616033 AP5Z1O43299 807 aa15.8■□□□□ 0.12
MSH6-214ENST00000616033 PRIMPOLQ96LW4 560 aa15.8■□□□□ 0.12
MSH6-214ENST00000616033 PPRC1Q5VV67 1664 aaKnown RBP15.8■□□□□ 0.12
MSH6-214ENST00000616033 KDM4AO75164 1064 aa15.8■□□□□ 0.12
MSH6-214ENST00000616033 TCEANC2Q96MN5 208 aa15.8■□□□□ 0.12
MSH6-214ENST00000616033 TET3O43151 1660 aa15.79■□□□□ 0.12
MSH6-214ENST00000616033 CHMLP26374 656 aa15.79■□□□□ 0.12
MSH6-214ENST00000616033 NECAB1Q8N987 351 aa15.79■□□□□ 0.12
MSH6-214ENST00000616033 KIF1BO60333 1816 aa15.79■□□□□ 0.12
MSH6-214ENST00000616033 RTL1A6NKG5 1358 aa15.79■□□□□ 0.12
MSH6-214ENST00000616033 FOSBP53539 338 aa15.79■□□□□ 0.12
MSH6-214ENST00000616033 LMOD3Q0VAK6 560 aa15.79■□□□□ 0.12
MSH6-214ENST00000616033 LUZP1Q86V48 1076 aa15.79■□□□□ 0.12
MSH6-214ENST00000616033 MROH1Q8NDA8 1641 aa15.79■□□□□ 0.12
MSH6-214ENST00000616033 COG3Q96JB2 828 aa15.78■□□□□ 0.12
MSH6-214ENST00000616033 TSPYL4Q9UJ04 414 aa15.78■□□□□ 0.12
MSH6-214ENST00000616033 MYOM2P54296 1465 aa15.78■□□□□ 0.12
MSH6-214ENST00000616033 SYT1P21579 422 aa15.78■□□□□ 0.12
MSH6-214ENST00000616033 TFIP11Q9UBB9 837 aaKnown RBP15.78■□□□□ 0.12
MSH6-214ENST00000616033 EFCAB6Q5THR3 1501 aa15.78■□□□□ 0.12
MSH6-214ENST00000616033 TULP4Q9NRJ4 1543 aa15.78■□□□□ 0.12
MSH6-214ENST00000616033 FRMPD1Q5SYB0 1578 aa15.78■□□□□ 0.12
MSH6-214ENST00000616033 TXNDC2Q86VQ3 553 aa15.78■□□□□ 0.12
MSH6-214ENST00000616033 SLC52A1Q9NWF4 448 aa15.78■□□□□ 0.12
MSH6-214ENST00000616033 NRBP1Q9UHY1 535 aa15.78■□□□□ 0.12
MSH6-214ENST00000616033 LRRC7Q96NW7 1537 aa15.77■□□□□ 0.12
MSH6-214ENST00000616033 GOLGA6L4A6NEF3 574 aa15.77■□□□□ 0.12
MSH6-214ENST00000616033 STX6O43752 255 aa15.77■□□□□ 0.12
MSH6-214ENST00000616033 IL13P35225 146 aa15.77■□□□□ 0.12
MSH6-214ENST00000616033 MROH2AA6NES4 1674 aa15.77■□□□□ 0.12
MSH6-214ENST00000616033 PTCH1Q13635 1447 aa15.77■□□□□ 0.12
MSH6-214ENST00000616033 MED14O60244 1454 aa15.77■□□□□ 0.12
MSH6-214ENST00000616033 OS9Q13438 667 aaPredicted RBP15.77■□□□□ 0.11
MSH6-214ENST00000616033 CCDC186Q7Z3E2 898 aa15.77■□□□□ 0.11
MSH6-214ENST00000616033 GNAI2P04899 355 aa15.77■□□□□ 0.11
MSH6-214ENST00000616033 CASTP20810 708 aaKnown RBP15.77■□□□□ 0.11
MSH6-214ENST00000616033 MCM2P49736 904 aa15.77■□□□□ 0.11
MSH6-214ENST00000616033 AK2P54819 239 aa15.77■□□□□ 0.11
MSH6-214ENST00000616033 TRIM5Q9C035 493 aa15.77■□□□□ 0.11
MSH6-214ENST00000616033 KCNF1Q9H3M0 494 aa15.77■□□□□ 0.11
MSH6-214ENST00000616033 DIAPH3Q9NSV4 1193 aa15.77■□□□□ 0.11
MSH6-214ENST00000616033 LRRFIP2Q9Y608 721 aaKnown RBP15.77■□□□□ 0.11
MSH6-214ENST00000616033 SURF6O75683 361 aaKnown RBP15.76■□□□□ 0.11
MSH6-214ENST00000616033 ZNF853P0CG23 659 aa15.76■□□□□ 0.11
MSH6-214ENST00000616033 ADGRB2O60241 1585 aa15.76■□□□□ 0.11
MSH6-214ENST00000616033 HECW2Q9P2P5 1572 aa15.76■□□□□ 0.11
MSH6-214ENST00000616033 PPFIA3O75145 1194 aa15.75■□□□□ 0.11
MSH6-214ENST00000616033 ZSCAN22P10073 491 aaPredicted RBP15.75■□□□□ 0.11
MSH6-214ENST00000616033 CEBPZQ03701 1054 aaKnown RBP15.75■□□□□ 0.11
MSH6-214ENST00000616033 FAM184AQ8NB25 1140 aa15.75■□□□□ 0.11
MSH6-214ENST00000616033 LARGE1O95461 756 aa15.75■□□□□ 0.11
MSH6-214ENST00000616033 RTF1Q92541 710 aaKnown RBP15.75■□□□□ 0.11
MSH6-214ENST00000616033 BRPF1P55201 1214 aaPredicted RBP15.75■□□□□ 0.11
MSH6-214ENST00000616033 STK3Q13188 491 aa15.75■□□□□ 0.11
MSH6-214ENST00000616033 NCBP3Q53F19 620 aaKnown RBP15.75■□□□□ 0.11
MSH6-214ENST00000616033 RASEFQ8IZ41 740 aa15.75■□□□□ 0.11
MSH6-214ENST00000616033 STK31Q9BXU1 1019 aa15.75■□□□□ 0.11
MSH6-214ENST00000616033 ABCC3O15438 1527 aa15.75■□□□□ 0.11
MSH6-214ENST00000616033 NEO1Q92859 1461 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms