RNA–Protein interactions for RNA: ENST00000614675.4

SNCB-206, Transcript of synuclein beta, humanhuman

TSL 1 (best) BASIC

Gene SNCB, Length 1,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-206ENST00000614675 MRC1P22897 1456 aa29.24■■■□□ 2.27
SNCB-206ENST00000614675 PSDA5PKW4 1024 aaPredicted RBP29.23■■■□□ 2.27
SNCB-206ENST00000614675 R3HDM1Q15032 1099 aaKnown RBP29.22■■■□□ 2.27
SNCB-206ENST00000614675 CCDC146Q8IYE0 955 aa29.22■■■□□ 2.27
SNCB-206ENST00000614675 DLG5Q8TDM6 1919 aa29.22■■■□□ 2.27
SNCB-206ENST00000614675 MRS2Q9HD23 443 aa29.2■■■□□ 2.27
SNCB-206ENST00000614675 PAPPAQ13219 1627 aa29.2■■■□□ 2.26
SNCB-206ENST00000614675 NFE2L2Q16236 605 aa29.2■■■□□ 2.26
SNCB-206ENST00000614675 CEMIPQ8WUJ3 1361 aa29.19■■■□□ 2.26
SNCB-206ENST00000614675 RTF1Q92541 710 aaKnown RBP29.19■■■□□ 2.26
SNCB-206ENST00000614675 LOC102724428A0A0B4J2F2 783 aa29.18■■■□□ 2.26
SNCB-206ENST00000614675 SIK1P57059 783 aa29.18■■■□□ 2.26
SNCB-206ENST00000614675 MCM10Q7L590 875 aa29.18■■■□□ 2.26
SNCB-206ENST00000614675 TEFQ10587 303 aa29.17■■■□□ 2.26
SNCB-206ENST00000614675 DCTN1Q14203 1278 aa29.17■■■□□ 2.26
SNCB-206ENST00000614675 HTATSF1O43719 755 aaKnown RBP29.16■■■□□ 2.26
SNCB-206ENST00000614675 RUNDC1Q96C34 613 aa29.16■■■□□ 2.26
SNCB-206ENST00000614675 STK32BQ9NY57 414 aa29.16■■■□□ 2.26
SNCB-206ENST00000614675 SIPA1L3O60292 1781 aaPredicted RBP29.15■■■□□ 2.26
SNCB-206ENST00000614675 TAF1LQ8IZX4 1826 aa29.14■■■□□ 2.26
SNCB-206ENST00000614675 SLC39A6Q13433 755 aa29.14■■■□□ 2.26
SNCB-206ENST00000614675 SLC15A2Q16348 729 aa29.14■■■□□ 2.26
SNCB-206ENST00000614675 ZNF827Q17R98 1081 aa29.14■■■□□ 2.26
SNCB-206ENST00000614675 RBM42Q9BTD8 480 aaKnown RBP29.14■■■□□ 2.26
SNCB-206ENST00000614675 PNISRQ8TF01 805 aaKnown RBP29.13■■■□□ 2.25
SNCB-206ENST00000614675 C5P01031 1676 aa29.13■■■□□ 2.25
SNCB-206ENST00000614675 PTCD1O75127 700 aaKnown RBP29.12■■■□□ 2.25
SNCB-206ENST00000614675 TMPOP42166 694 aaKnown RBP29.12■■■□□ 2.25
SNCB-206ENST00000614675 SLC4A9Q96Q91 983 aa29.12■■■□□ 2.25
SNCB-206ENST00000614675 ATP6V1AP38606 617 aa29.11■■■□□ 2.25
SNCB-206ENST00000614675 AKT1S1Q96B36 256 aa29.11■■■□□ 2.25
SNCB-206ENST00000614675 RRP7AQ9Y3A4 280 aaKnown RBP29.11■■■□□ 2.25
SNCB-206ENST00000614675 RIPK4P57078 832 aa29.11■■■□□ 2.25
SNCB-206ENST00000614675 ITPK1Q13572 414 aa29.1■■■□□ 2.25
SNCB-206ENST00000614675 NEUROD2Q15784 382 aa29.08■■■□□ 2.25
SNCB-206ENST00000614675 THUMPD2Q9BTF0 503 aaKnown RBP29.08■■■□□ 2.25
SNCB-206ENST00000614675 LINC00116Q8NCU8 138 aa29.07■■■□□ 2.24
SNCB-206ENST00000614675 ZNF831Q5JPB2 1677 aa29.07■■■□□ 2.24
SNCB-206ENST00000614675 DIEXFQ68CQ4 756 aaKnown RBP29.06■■■□□ 2.24
SNCB-206ENST00000614675 C4BP0C0L5 1744 aa29.06■■■□□ 2.24
SNCB-206ENST00000614675 KCPQ6ZWJ8 1503 aa29.05■■■□□ 2.24
SNCB-206ENST00000614675 BTBD11A6QL63 1104 aa29.05■■■□□ 2.24
SNCB-206ENST00000614675 PDGFDQ9GZP0 370 aaPredicted RBP29.05■■■□□ 2.24
SNCB-206ENST00000614675 TUBGCP6Q96RT7 1819 aa29.05■■■□□ 2.24
SNCB-206ENST00000614675 UBR2Q8IWV8 1755 aa29.04■■■□□ 2.24
SNCB-206ENST00000614675 HMGB2P26583 209 aaKnown RBP29.04■■■□□ 2.24
SNCB-206ENST00000614675 ZNF790Q6PG37 636 aa29.04■■■□□ 2.24
SNCB-206ENST00000614675 TTC5Q8N0Z6 440 aa29.04■■■□□ 2.24
SNCB-206ENST00000614675 TFCP2L1Q9NZI6 479 aa29.04■■■□□ 2.24
SNCB-206ENST00000614675 APAF1O14727 1248 aa29.03■■■□□ 2.24
SNCB-206ENST00000614675 KCNQ3O43525 872 aa29.03■■■□□ 2.24
SNCB-206ENST00000614675 LMOD3Q0VAK6 560 aa29.02■■■□□ 2.24
SNCB-206ENST00000614675 TAF7Q15545 349 aaPredicted RBP29.02■■■□□ 2.24
SNCB-206ENST00000614675 COL5A3P25940 1745 aaPredicted RBP29.01■■■□□ 2.23
SNCB-206ENST00000614675 TJP1Q07157 1748 aa29.01■■■□□ 2.23
SNCB-206ENST00000614675 CASZ1Q86V15 1759 aa29.01■■■□□ 2.23
SNCB-206ENST00000614675 QSER1Q2KHR3 1735 aa29■■■□□ 2.23
SNCB-206ENST00000614675 ZNF496Q96IT1 587 aaPredicted RBP29■■■□□ 2.23
SNCB-206ENST00000614675 AK7Q96M32 723 aa29■■■□□ 2.23
SNCB-206ENST00000614675 TRIM35Q9UPQ4 493 aa29■■■□□ 2.23
SNCB-206ENST00000614675 FAM9BQ8IZU0 186 aa28.99■■■□□ 2.23
SNCB-206ENST00000614675 MIS18AQ9NYP9 233 aa28.99■■■□□ 2.23
SNCB-206ENST00000614675 PNPLA7Q6ZV29 1317 aa28.99■■■□□ 2.23
SNCB-206ENST00000614675 CICQ96RK0 1608 aaPredicted RBP28.99■■■□□ 2.23
SNCB-206ENST00000614675 DNAJC10Q8IXB1 793 aa28.98■■■□□ 2.23
SNCB-206ENST00000614675 SRCAPQ6ZRS2 3230 aa28.98■■■□□ 2.23
SNCB-206ENST00000614675 MYH14Q7Z406 1995 aaKnown RBP28.97■■■□□ 2.23
SNCB-206ENST00000614675 UBR3Q6ZT12 1888 aa28.97■■■□□ 2.23
SNCB-206ENST00000614675 AMIGO3Q86WK7 504 aa28.96■■■□□ 2.23
SNCB-206ENST00000614675 VSIG10Q8N0Z9 540 aa28.96■■■□□ 2.23
SNCB-206ENST00000614675 SENP3-EIF4A1A0A087X0R7 540 aa28.95■■■□□ 2.23
SNCB-206ENST00000614675 SMIM5Q71RC9 77 aa28.95■■■□□ 2.23
SNCB-206ENST00000614675 FMNL2Q96PY5 1086 aa28.95■■■□□ 2.23
SNCB-206ENST00000614675 HEG1Q9ULI3 1381 aa28.95■■■□□ 2.22
SNCB-206ENST00000614675 GNPATO15228 680 aa28.94■■■□□ 2.22
SNCB-206ENST00000614675 CNTNAP4Q9C0A0 1308 aa28.94■■■□□ 2.22
SNCB-206ENST00000614675 RC3H1Q5TC82 1133 aaKnown RBP28.94■■■□□ 2.22
SNCB-206ENST00000614675 COL23A1Q86Y22 540 aaPredicted RBP28.94■■■□□ 2.22
SNCB-206ENST00000614675 KDM3BQ7LBC6 1761 aa28.93■■■□□ 2.22
SNCB-206ENST00000614675 CCER2I3L3R5 266 aa28.93■■■□□ 2.22
SNCB-206ENST00000614675 ZBTB7AO95365 584 aa28.93■■■□□ 2.22
SNCB-206ENST00000614675 CRKLP46109 303 aaKnown RBP28.93■■■□□ 2.22
SNCB-206ENST00000614675 PHF14O94880 888 aa28.92■■■□□ 2.22
SNCB-206ENST00000614675 CYP19A1P11511 503 aaPredicted RBP28.91■■■□□ 2.22
SNCB-206ENST00000614675 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.9■■■□□ 2.22
SNCB-206ENST00000614675 MSH5O43196 834 aa28.9■■■□□ 2.22
SNCB-206ENST00000614675 SSFA2P28290 1259 aa28.89■■■□□ 2.22
SNCB-206ENST00000614675 MIER1Q8N108 512 aa28.89■■■□□ 2.22
SNCB-206ENST00000614675 FLAD1Q8NFF5 587 aa28.89■■■□□ 2.22
SNCB-206ENST00000614675 INTS5Q6P9B9 1019 aaKnown RBP28.88■■■□□ 2.21
SNCB-206ENST00000614675 TSPYL4Q9UJ04 414 aa28.88■■■□□ 2.21
SNCB-206ENST00000614675 RTCBQ9Y3I0 505 aaKnown RBP28.88■■■□□ 2.21
SNCB-206ENST00000614675 RPS6KA4O75676 772 aa28.87■■■□□ 2.21
SNCB-206ENST00000614675 SPON1Q9HCB6 807 aa28.87■■■□□ 2.21
SNCB-206ENST00000614675 ATF5Q9Y2D1 282 aaPredicted RBP28.87■■■□□ 2.21
SNCB-206ENST00000614675 PRAMEF22A3QJZ6 481 aa28.86■■■□□ 2.21
SNCB-206ENST00000614675 TEX13AQ9BXU3 409 aaPredicted RBP28.86■■■□□ 2.21
SNCB-206ENST00000614675 MTFR1LQ9H019 292 aa28.86■■■□□ 2.21
SNCB-206ENST00000614675 CCDC87Q9NVE4 849 aa28.86■■■□□ 2.21
SNCB-206ENST00000614675 LRP5O75197 1615 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms