RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 TARBP1Q13395 1621 aaKnown RBP14.73□□□□□ -0.05
CDH1-212ENST00000611625 PHACTR3Q96KR7 559 aa14.73□□□□□ -0.05
CDH1-212ENST00000611625 RBM27Q9P2N5 1060 aaKnown RBP14.73□□□□□ -0.05
CDH1-212ENST00000611625 CFAP45Q9UL16 551 aa14.73□□□□□ -0.05
CDH1-212ENST00000611625 CLCN1P35523 988 aa14.73□□□□□ -0.05
CDH1-212ENST00000611625 PDE1AP54750 535 aa14.73□□□□□ -0.05
CDH1-212ENST00000611625 XPCQ01831 940 aaPredicted RBP14.73□□□□□ -0.05
CDH1-212ENST00000611625 RAB3GAP1Q15042 981 aa14.73□□□□□ -0.05
CDH1-212ENST00000611625 HSP90AB2PQ58FF8 381 aa14.73□□□□□ -0.05
CDH1-212ENST00000611625 DDX54Q8TDD1 881 aaKnown RBP14.73□□□□□ -0.05
CDH1-212ENST00000611625 TBC1D2BQ9UPU7 963 aa14.73□□□□□ -0.05
CDH1-212ENST00000611625 CCDC158Q5M9N0 1113 aa14.73□□□□□ -0.05
CDH1-212ENST00000611625 TMX3Q96JJ7 454 aa14.73□□□□□ -0.05
CDH1-212ENST00000611625 DCTPP1Q9H773 170 aa14.73□□□□□ -0.05
CDH1-212ENST00000611625 ARHGEF5Q12774 1597 aa14.73□□□□□ -0.05
CDH1-212ENST00000611625 C16orf71Q8IYS4 520 aaPredicted RBP14.72□□□□□ -0.05
CDH1-212ENST00000611625 KCNH5Q8NCM2 988 aa14.72□□□□□ -0.05
CDH1-212ENST00000611625 SPG7Q9UQ90 795 aa14.72□□□□□ -0.05
CDH1-212ENST00000611625 PRKCSHP14314 528 aaPredicted RBP14.72□□□□□ -0.05
CDH1-212ENST00000611625 ZSCAN23Q3MJ62 389 aa14.72□□□□□ -0.05
CDH1-212ENST00000611625 AMOTL2Q9Y2J4 779 aa14.72□□□□□ -0.05
CDH1-212ENST00000611625 ZFYVE9O95405 1425 aa14.72□□□□□ -0.05
CDH1-212ENST00000611625 MBD5Q9P267 1494 aa14.72□□□□□ -0.05
CDH1-212ENST00000611625 A0A0U1RQG5 324 aaPredicted RBP14.72□□□□□ -0.05
CDH1-212ENST00000611625 MARCH6O60337 910 aa14.72□□□□□ -0.05
CDH1-212ENST00000611625 VPS37DQ86XT2 251 aa14.72□□□□□ -0.05
CDH1-212ENST00000611625 KDM4AO75164 1064 aa14.72□□□□□ -0.05
CDH1-212ENST00000611625 IPO7O95373 1038 aaKnown RBP14.72□□□□□ -0.05
CDH1-212ENST00000611625 CABP4P57796 275 aa14.72□□□□□ -0.05
CDH1-212ENST00000611625 BOLA2Q9H3K6 86 aa14.71□□□□□ -0.05
CDH1-212ENST00000611625 PTPRTO14522 1441 aa14.71□□□□□ -0.05
CDH1-212ENST00000611625 PPIP5K1Q6PFW1 1433 aa14.71□□□□□ -0.05
CDH1-212ENST00000611625 TTC39AQ5SRH9 613 aa14.71□□□□□ -0.05
CDH1-212ENST00000611625 ZRANB1Q9UGI0 708 aa14.71□□□□□ -0.05
CDH1-212ENST00000611625 MAGI2Q86UL8 1455 aa14.71□□□□□ -0.05
CDH1-212ENST00000611625 PPP1R42Q7Z4L9 355 aa14.71□□□□□ -0.05
CDH1-212ENST00000611625 USP25Q9UHP3 1055 aa14.71□□□□□ -0.05
CDH1-212ENST00000611625 DDX11Q96FC9 970 aa14.71□□□□□ -0.06
CDH1-212ENST00000611625 PIK3R4Q99570 1358 aa14.7□□□□□ -0.06
CDH1-212ENST00000611625 TEX35Q5T0J7 233 aa14.7□□□□□ -0.06
CDH1-212ENST00000611625 PDILTQ8N807 584 aa14.7□□□□□ -0.06
CDH1-212ENST00000611625 CCDC112Q8NEF3 446 aa14.7□□□□□ -0.06
CDH1-212ENST00000611625 NOC3LQ8WTT2 800 aaKnown RBP14.7□□□□□ -0.06
CDH1-212ENST00000611625 JMYQ8N9B5 988 aa14.7□□□□□ -0.06
CDH1-212ENST00000611625 LARP6Q9BRS8 491 aaKnown RBP14.7□□□□□ -0.06
CDH1-212ENST00000611625 SCAND2PQ9GZW5 306 aaPredicted RBP14.7□□□□□ -0.06
CDH1-212ENST00000611625 ZBTB7BO15156 539 aaPredicted RBP14.7□□□□□ -0.06
CDH1-212ENST00000611625 ECHDC1Q9NTX5 307 aa14.7□□□□□ -0.06
CDH1-212ENST00000611625 DBF4Q9UBU7 674 aaPredicted RBP14.7□□□□□ -0.06
CDH1-212ENST00000611625 CEP170Q5SW79 1584 aa14.7□□□□□ -0.06
CDH1-212ENST00000611625 EIF4A2Q14240 407 aaKnown RBP14.7□□□□□ -0.06
CDH1-212ENST00000611625 SART3Q15020 963 aaKnown RBP14.7□□□□□ -0.06
CDH1-212ENST00000611625 LARP1Q6PKG0 1096 aaKnown RBP14.7□□□□□ -0.06
CDH1-212ENST00000611625 PLEKHM2Q8IWE5 1019 aa14.7□□□□□ -0.06
CDH1-212ENST00000611625 ATP2B1P20020 1258 aa14.69□□□□□ -0.06
CDH1-212ENST00000611625 RBM25P49756 843 aaKnown RBP14.69□□□□□ -0.06
CDH1-212ENST00000611625 CAMK4Q16566 473 aa14.69□□□□□ -0.06
CDH1-212ENST00000611625 TRIM35Q9UPQ4 493 aa14.69□□□□□ -0.06
CDH1-212ENST00000611625 STX6O43752 255 aa14.69□□□□□ -0.06
CDH1-212ENST00000611625 CEP85Q6P2H3 762 aa14.69□□□□□ -0.06
CDH1-212ENST00000611625 ANKLE2Q86XL3 938 aa14.69□□□□□ -0.06
CDH1-212ENST00000611625 CEP57L1Q8IYX8 460 aa14.69□□□□□ -0.06
CDH1-212ENST00000611625 CCDC47Q96A33 483 aaKnown RBP14.69□□□□□ -0.06
CDH1-212ENST00000611625 ESYT1Q9BSJ8 1104 aa14.69□□□□□ -0.06
CDH1-212ENST00000611625 CCDC8Q9H0W5 538 aaPredicted RBP14.69□□□□□ -0.06
CDH1-212ENST00000611625 AMOTQ4VCS5 1084 aa14.68□□□□□ -0.06
CDH1-212ENST00000611625 MPRIPQ6WCQ1 1025 aa14.68□□□□□ -0.06
CDH1-212ENST00000611625 CLSTN1O94985 981 aa14.68□□□□□ -0.06
CDH1-212ENST00000611625 XBP1P17861 261 aa14.68□□□□□ -0.06
CDH1-212ENST00000611625 KIF6Q6ZMV9 814 aa14.68□□□□□ -0.06
CDH1-212ENST00000611625 PCMTD1Q96MG8 357 aaPredicted RBP14.68□□□□□ -0.06
CDH1-212ENST00000611625 CEP126Q9P2H0 1117 aa14.68□□□□□ -0.06
CDH1-212ENST00000611625 POGZQ7Z3K3 1410 aa14.68□□□□□ -0.06
CDH1-212ENST00000611625 FKBP4Q02790 459 aaKnown RBP eCLIP14.68□□□□□ -0.06
CDH1-212ENST00000611625 KRT24Q2M2I5 525 aa14.68□□□□□ -0.06
CDH1-212ENST00000611625 LRSAM1Q6UWE0 723 aa14.68□□□□□ -0.06
CDH1-212ENST00000611625 AMOTL1Q8IY63 956 aa14.68□□□□□ -0.06
CDH1-212ENST00000611625 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.68□□□□□ -0.06
CDH1-212ENST00000611625 PI4KAP2A4QPH2 592 aa14.67□□□□□ -0.06
CDH1-212ENST00000611625 MCM5P33992 734 aa14.67□□□□□ -0.06
CDH1-212ENST00000611625 ANAPC15P60006 121 aa14.67□□□□□ -0.06
CDH1-212ENST00000611625 PI4KAP1Q8N8J0 262 aa14.67□□□□□ -0.06
CDH1-212ENST00000611625 RHPN1Q8TCX5 695 aa14.67□□□□□ -0.06
CDH1-212ENST00000611625 ABCC1P33527 1531 aa14.67□□□□□ -0.06
CDH1-212ENST00000611625 ATP7AQ04656 1500 aa14.67□□□□□ -0.06
CDH1-212ENST00000611625 NCBP3Q53F19 620 aaKnown RBP14.67□□□□□ -0.06
CDH1-212ENST00000611625 FILIP1Q7Z7B0 1213 aa14.67□□□□□ -0.06
CDH1-212ENST00000611625 PHF8Q9UPP1 1060 aa14.67□□□□□ -0.06
CDH1-212ENST00000611625 CTNNA3Q9UI47 895 aa14.67□□□□□ -0.06
CDH1-212ENST00000611625 NPATQ14207 1427 aa14.67□□□□□ -0.06
CDH1-212ENST00000611625 ZC3H6P61129 1189 aaKnown RBP14.67□□□□□ -0.06
CDH1-212ENST00000611625 CCDC57Q2TAC2 916 aa14.67□□□□□ -0.06
CDH1-212ENST00000611625 CCDC70Q6NSX1 233 aa14.67□□□□□ -0.06
CDH1-212ENST00000611625 CNNM1Q9NRU3 951 aa14.67□□□□□ -0.06
CDH1-212ENST00000611625 CCP110O43303 1012 aa14.66□□□□□ -0.06
CDH1-212ENST00000611625 TRMT2AQ8IZ69 625 aaKnown RBP14.66□□□□□ -0.06
CDH1-212ENST00000611625 EVI5LQ96CN4 794 aa14.66□□□□□ -0.06
CDH1-212ENST00000611625 ZNF521Q96K83 1311 aa14.66□□□□□ -0.06
CDH1-212ENST00000611625 NOL10Q9BSC4 688 aaKnown RBP14.66□□□□□ -0.06
CDH1-212ENST00000611625 BRMS1Q9HCU9 246 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms