RNA–Protein interactions for RNA: ENST00000611327.1

SDR42E1P1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1 pseudogene 1, humanhuman

BASIC

Gene SDR42E1P1, Length 477 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1P1-201ENST00000611327 COL23A1Q86Y22 540 aaPredicted RBP8.19□□□□□ -1.1
SDR42E1P1-201ENST00000611327 ACEP12821 1306 aa8.19□□□□□ -1.1
SDR42E1P1-201ENST00000611327 ARHGEF28Q8N1W1 1705 aaKnown RBP8.18□□□□□ -1.1
SDR42E1P1-201ENST00000611327 AKAP12Q02952 1782 aa8.18□□□□□ -1.1
SDR42E1P1-201ENST00000611327 RIMBP2O15034 1052 aa8.18□□□□□ -1.1
SDR42E1P1-201ENST00000611327 MLLT1Q03111 559 aaPredicted RBP8.18□□□□□ -1.1
SDR42E1P1-201ENST00000611327 CARD10Q9BWT7 1032 aa8.18□□□□□ -1.1
SDR42E1P1-201ENST00000611327 AXIN2Q9Y2T1 843 aa8.18□□□□□ -1.1
SDR42E1P1-201ENST00000611327 NHSQ6T4R5 1651 aa8.18□□□□□ -1.1
SDR42E1P1-201ENST00000611327 ANKRD13DQ6ZTN6 518 aa8.17□□□□□ -1.1
SDR42E1P1-201ENST00000611327 SMC1BQ8NDV3 1235 aa8.17□□□□□ -1.1
SDR42E1P1-201ENST00000611327 SPATA31E1Q6ZUB1 1445 aa8.17□□□□□ -1.1
SDR42E1P1-201ENST00000611327 COL24A1Q17RW2 1714 aa8.17□□□□□ -1.1
SDR42E1P1-201ENST00000611327 LOC105371045A0A1W2PR82 267 aa8.16□□□□□ -1.1
SDR42E1P1-201ENST00000611327 POLR3AO14802 1390 aaPredicted RBP8.16□□□□□ -1.1
SDR42E1P1-201ENST00000611327 FOXN1O15353 648 aa8.15□□□□□ -1.1
SDR42E1P1-201ENST00000611327 NLRP6P59044 892 aa8.15□□□□□ -1.1
SDR42E1P1-201ENST00000611327 ARHGAP27Q6ZUM4 889 aa8.15□□□□□ -1.1
SDR42E1P1-201ENST00000611327 SYTL4Q96C24 671 aaPredicted RBP8.15□□□□□ -1.1
SDR42E1P1-201ENST00000611327 PPIP5K1Q6PFW1 1433 aa8.14□□□□□ -1.11
SDR42E1P1-201ENST00000611327 CCDC7Q96M83 1385 aa8.14□□□□□ -1.11
SDR42E1P1-201ENST00000611327 KDM2BQ8NHM5 1336 aa8.14□□□□□ -1.11
SDR42E1P1-201ENST00000611327 ABHD8Q96I13 439 aa8.14□□□□□ -1.11
SDR42E1P1-201ENST00000611327 RRAGCQ9HB90 399 aa8.14□□□□□ -1.11
SDR42E1P1-201ENST00000611327 PRDM10Q9NQV6 1147 aa8.14□□□□□ -1.11
SDR42E1P1-201ENST00000611327 CCNL1Q9UK58 526 aaPredicted RBP8.14□□□□□ -1.11
SDR42E1P1-201ENST00000611327 BCS1LQ9Y276 419 aa8.14□□□□□ -1.11
SDR42E1P1-201ENST00000611327 QSER1Q2KHR3 1735 aa8.14□□□□□ -1.11
SDR42E1P1-201ENST00000611327 BTAF1O14981 1849 aa8.13□□□□□ -1.11
SDR42E1P1-201ENST00000611327 SOX12O15370 315 aa8.13□□□□□ -1.11
SDR42E1P1-201ENST00000611327 C9orf131Q5VYM1 1079 aa8.13□□□□□ -1.11
SDR42E1P1-201ENST00000611327 GPR153Q6NV75 609 aa8.13□□□□□ -1.11
SDR42E1P1-201ENST00000611327 CDK19Q9BWU1 502 aa8.13□□□□□ -1.11
SDR42E1P1-201ENST00000611327 PLEKHG3A1L390 1219 aa8.12□□□□□ -1.11
SDR42E1P1-201ENST00000611327 CCDC85CA6NKD9 419 aa8.12□□□□□ -1.11
SDR42E1P1-201ENST00000611327 AIDAQ96BJ3 306 aa8.12□□□□□ -1.11
SDR42E1P1-201ENST00000611327 ZSWIM6Q9HCJ5 1215 aa8.12□□□□□ -1.11
SDR42E1P1-201ENST00000611327 ABCC6O95255 1503 aa8.12□□□□□ -1.11
SDR42E1P1-201ENST00000611327 WNK3Q9BYP7 1800 aa8.12□□□□□ -1.11
SDR42E1P1-201ENST00000611327 CPSF1Q10570 1443 aaKnown RBP8.12□□□□□ -1.11
SDR42E1P1-201ENST00000611327 PLEKHG2Q9H7P9 1386 aa8.11□□□□□ -1.11
SDR42E1P1-201ENST00000611327 TRPM1Q7Z4N2 1603 aa8.11□□□□□ -1.11
SDR42E1P1-201ENST00000611327 TUBGCP6Q96RT7 1819 aa8.11□□□□□ -1.11
SDR42E1P1-201ENST00000611327 IL2RBP14784 551 aa8.11□□□□□ -1.11
SDR42E1P1-201ENST00000611327 CTCFP49711 727 aaPredicted RBP8.11□□□□□ -1.11
SDR42E1P1-201ENST00000611327 DDX54Q8TDD1 881 aaKnown RBP8.11□□□□□ -1.11
SDR42E1P1-201ENST00000611327 CABP2Q9NPB3 220 aa8.11□□□□□ -1.11
SDR42E1P1-201ENST00000611327 NLRP2Q9NX02 1062 aa8.11□□□□□ -1.11
SDR42E1P1-201ENST00000611327 MKRN1Q9UHC7 482 aaKnown RBP8.11□□□□□ -1.11
SDR42E1P1-201ENST00000611327 KCPQ6ZWJ8 1503 aa8.11□□□□□ -1.11
SDR42E1P1-201ENST00000611327 CICQ96RK0 1608 aaPredicted RBP8.11□□□□□ -1.11
SDR42E1P1-201ENST00000611327 KAT6BQ8WYB5 2073 aa8.1□□□□□ -1.11
SDR42E1P1-201ENST00000611327 ITSN1Q15811 1721 aa8.1□□□□□ -1.11
SDR42E1P1-201ENST00000611327 PRIM1P49642 420 aaKnown RBP8.1□□□□□ -1.11
SDR42E1P1-201ENST00000611327 ARHGEF25Q86VW2 580 aa8.1□□□□□ -1.11
SDR42E1P1-201ENST00000611327 FLAD1Q8NFF5 587 aa8.1□□□□□ -1.11
SDR42E1P1-201ENST00000611327 CHRM1P11229 460 aaPredicted RBP8.09□□□□□ -1.11
SDR42E1P1-201ENST00000611327 LBX1P52954 281 aa8.09□□□□□ -1.11
SDR42E1P1-201ENST00000611327 LSM11P83369 360 aaKnown RBP eCLIP8.09□□□□□ -1.11
SDR42E1P1-201ENST00000611327 TMEM92Q6UXU6 159 aa8.09□□□□□ -1.11
SDR42E1P1-201ENST00000611327 RNF181Q9P0P0 153 aa8.09□□□□□ -1.11
SDR42E1P1-201ENST00000611327 C10orf71Q711Q0 1435 aa8.09□□□□□ -1.11
SDR42E1P1-201ENST00000611327 ADGRB1O14514 1584 aa8.09□□□□□ -1.11
SDR42E1P1-201ENST00000611327 SLIT3O75094 1523 aa8.08□□□□□ -1.12
SDR42E1P1-201ENST00000611327 A0A0G2JLW4 131 aa8.08□□□□□ -1.12
SDR42E1P1-201ENST00000611327 FCHSD2O94868 740 aa8.08□□□□□ -1.12
SDR42E1P1-201ENST00000611327 PHF14O94880 888 aa8.08□□□□□ -1.12
SDR42E1P1-201ENST00000611327 SMIM5Q71RC9 77 aa8.08□□□□□ -1.12
SDR42E1P1-201ENST00000611327 CFAP44Q96MT7 982 aa8.08□□□□□ -1.12
SDR42E1P1-201ENST00000611327 RGS19P49795 217 aa8.07□□□□□ -1.12
SDR42E1P1-201ENST00000611327 PDAP1Q13442 181 aaKnown RBP8.07□□□□□ -1.12
SDR42E1P1-201ENST00000611327 GSE1Q14687 1217 aa8.07□□□□□ -1.12
SDR42E1P1-201ENST00000611327 KCNH5Q8NCM2 988 aa8.07□□□□□ -1.12
SDR42E1P1-201ENST00000611327 COL18A1P39060 1754 aa8.07□□□□□ -1.12
SDR42E1P1-201ENST00000611327 PXDNLA1KZ92 1463 aa8.06□□□□□ -1.12
SDR42E1P1-201ENST00000611327 SRPK2P78362 688 aaKnown RBP8.06□□□□□ -1.12
SDR42E1P1-201ENST00000611327 AK7Q96M32 723 aa8.06□□□□□ -1.12
SDR42E1P1-201ENST00000611327 IRX2Q9BZI1 471 aaPredicted RBP8.06□□□□□ -1.12
SDR42E1P1-201ENST00000611327 HCSTQ9UBK5 93 aa8.06□□□□□ -1.12
SDR42E1P1-201ENST00000611327 ANKRD36BQ8N2N9 1353 aa8.06□□□□□ -1.12
SDR42E1P1-201ENST00000611327 USP47Q96K76 1375 aa8.06□□□□□ -1.12
SDR42E1P1-201ENST00000611327 PIK3C2AO00443 1686 aa8.05□□□□□ -1.12
SDR42E1P1-201ENST00000611327 TGFB2P61812 414 aa8.05□□□□□ -1.12
SDR42E1P1-201ENST00000611327 NSD2O96028 1365 aa8.05□□□□□ -1.12
SDR42E1P1-201ENST00000611327 KIAA1210Q9ULL0 1709 aa8.04□□□□□ -1.12
SDR42E1P1-201ENST00000611327 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.04□□□□□ -1.12
SDR42E1P1-201ENST00000611327 MMP10P09238 476 aa8.04□□□□□ -1.12
SDR42E1P1-201ENST00000611327 VEGFAP15692 232 aaPredicted RBP8.04□□□□□ -1.12
SDR42E1P1-201ENST00000611327 DPEP1P16444 411 aa8.04□□□□□ -1.12
SDR42E1P1-201ENST00000611327 ARSIQ5FYB1 569 aa8.04□□□□□ -1.12
SDR42E1P1-201ENST00000611327 AMIGO3Q86WK7 504 aa8.04□□□□□ -1.12
SDR42E1P1-201ENST00000611327 KDM2AQ9Y2K7 1162 aa8.04□□□□□ -1.12
SDR42E1P1-201ENST00000611327 PDE4DIPQ5VU43 2346 aa8.04□□□□□ -1.12
SDR42E1P1-201ENST00000611327 HMGB2P26583 209 aaKnown RBP8.03□□□□□ -1.12
SDR42E1P1-201ENST00000611327 CABP1Q9NZU7 370 aa8.03□□□□□ -1.12
SDR42E1P1-201ENST00000611327 CNTNAP1P78357 1384 aa8.02□□□□□ -1.13
SDR42E1P1-201ENST00000611327 ZNF316A6NFI3 1004 aaPredicted RBP8.02□□□□□ -1.13
SDR42E1P1-201ENST00000611327 HSPA8P11142 646 aaKnown RBP8.02□□□□□ -1.13
SDR42E1P1-201ENST00000611327 ANKRD24Q8TF21 1146 aa8.02□□□□□ -1.13
SDR42E1P1-201ENST00000611327 MPHOSPH9Q99550 1183 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms