RNA–Protein interactions for RNA: ENST00000602171.5

FARP1-239, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-239ENST00000602171 HPS1Q92902 700 aa10.77□□□□□ -0.69
FARP1-239ENST00000602171 KIFC2Q96AC6 838 aa10.77□□□□□ -0.69
FARP1-239ENST00000602171 PTPRTO14522 1441 aa10.76□□□□□ -0.69
FARP1-239ENST00000602171 E9PCH4 1651 aa10.76□□□□□ -0.69
FARP1-239ENST00000602171 KCNH2Q12809 1159 aa10.75□□□□□ -0.69
FARP1-239ENST00000602171 AK7Q96M32 723 aa10.75□□□□□ -0.69
FARP1-239ENST00000602171 CCDC144AA2RUR9 1427 aa10.75□□□□□ -0.69
FARP1-239ENST00000602171 PREX1Q8TCU6 1659 aa10.74□□□□□ -0.69
FARP1-239ENST00000602171 SIAH2O43255 324 aa10.74□□□□□ -0.69
FARP1-239ENST00000602171 IDI1Q13907 227 aa10.74□□□□□ -0.69
FARP1-239ENST00000602171 THEMISQ8N1K5 641 aaPredicted RBP10.74□□□□□ -0.69
FARP1-239ENST00000602171 TRIM47Q96LD4 638 aa10.74□□□□□ -0.69
FARP1-239ENST00000602171 TBC1D2Q9BYX2 928 aa10.74□□□□□ -0.69
FARP1-239ENST00000602171 UNC93B1Q9H1C4 597 aa10.74□□□□□ -0.69
FARP1-239ENST00000602171 WASF2Q9Y6W5 498 aa10.74□□□□□ -0.69
FARP1-239ENST00000602171 SETD1BQ9UPS6 1966 aaKnown RBP10.74□□□□□ -0.69
FARP1-239ENST00000602171 WFS1O76024 890 aa10.73□□□□□ -0.69
FARP1-239ENST00000602171 SH3BP2P78314 561 aa10.73□□□□□ -0.69
FARP1-239ENST00000602171 DHX57Q6P158 1386 aaKnown RBP10.73□□□□□ -0.69
FARP1-239ENST00000602171 A2ML1A8K2U0 1454 aa10.73□□□□□ -0.69
FARP1-239ENST00000602171 TRPM2O94759 1503 aa10.73□□□□□ -0.69
FARP1-239ENST00000602171 TRIM66O15016 1216 aa10.72□□□□□ -0.69
FARP1-239ENST00000602171 LCE2AQ5TA79 106 aaPredicted RBP10.72□□□□□ -0.69
FARP1-239ENST00000602171 ANKRD30BQ9BXX2 1392 aa10.72□□□□□ -0.69
FARP1-239ENST00000602171 PLEKHG3A1L390 1219 aa10.71□□□□□ -0.69
FARP1-239ENST00000602171 SPHKAPQ2M3C7 1700 aa10.71□□□□□ -0.69
FARP1-239ENST00000602171 RSBN1LQ6PCB5 846 aaPredicted RBP10.71□□□□□ -0.69
FARP1-239ENST00000602171 PARP9Q8IXQ6 854 aa10.71□□□□□ -0.69
FARP1-239ENST00000602171 MYO3AQ8NEV4 1616 aa10.71□□□□□ -0.69
FARP1-239ENST00000602171 CLSPNQ9HAW4 1339 aa10.71□□□□□ -0.69
FARP1-239ENST00000602171 SYNMO15061 1565 aa10.7□□□□□ -0.7
FARP1-239ENST00000602171 UGGT1Q9NYU2 1555 aa10.7□□□□□ -0.7
FARP1-239ENST00000602171 CEP170BQ9Y4F5 1589 aaPredicted RBP10.7□□□□□ -0.7
FARP1-239ENST00000602171 PLA2R1Q13018 1463 aa10.7□□□□□ -0.7
FARP1-239ENST00000602171 VARSP26640 1264 aaKnown RBP10.7□□□□□ -0.7
FARP1-239ENST00000602171 SPTLC1O15269 473 aa10.69□□□□□ -0.7
FARP1-239ENST00000602171 ZNF326Q5BKZ1 582 aaKnown RBP10.69□□□□□ -0.7
FARP1-239ENST00000602171 PRPF38BQ5VTL8 546 aaKnown RBP10.69□□□□□ -0.7
FARP1-239ENST00000602171 MPNDQ8N594 471 aa10.69□□□□□ -0.7
FARP1-239ENST00000602171 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.69□□□□□ -0.7
FARP1-239ENST00000602171 CCER1Q8TC90 406 aaPredicted RBP10.69□□□□□ -0.7
FARP1-239ENST00000602171 BAP1Q92560 729 aa10.69□□□□□ -0.7
FARP1-239ENST00000602171 ZBTB3Q9H5J0 574 aa10.69□□□□□ -0.7
FARP1-239ENST00000602171 EID1Q9Y6B2 187 aa10.69□□□□□ -0.7
FARP1-239ENST00000602171 LMTK3Q96Q04 1460 aa10.68□□□□□ -0.7
FARP1-239ENST00000602171 RPGRIP1LQ68CZ1 1315 aa10.68□□□□□ -0.7
FARP1-239ENST00000602171 LYPD8Q6UX82 237 aa10.68□□□□□ -0.7
FARP1-239ENST00000602171 ANKLE2Q86XL3 938 aa10.68□□□□□ -0.7
FARP1-239ENST00000602171 ZNF511Q8NB15 262 aa10.68□□□□□ -0.7
FARP1-239ENST00000602171 PIK3C2BO00750 1634 aa10.68□□□□□ -0.7
FARP1-239ENST00000602171 ADGRB3O60242 1522 aa10.68□□□□□ -0.7
FARP1-239ENST00000602171 KDM5AP29375 1690 aaKnown RBP10.67□□□□□ -0.7
FARP1-239ENST00000602171 ZNF142P52746 1687 aaPredicted RBP10.67□□□□□ -0.7
FARP1-239ENST00000602171 CFAP65Q6ZU64 1925 aaKnown RBP10.67□□□□□ -0.7
FARP1-239ENST00000602171 SNRPBP14678 240 aaKnown RBP10.67□□□□□ -0.7
FARP1-239ENST00000602171 TMEM2Q9UHN6 1383 aa10.66□□□□□ -0.7
FARP1-239ENST00000602171 CAPN5O15484 640 aaPredicted RBP10.66□□□□□ -0.7
FARP1-239ENST00000602171 PPP1R15AO75807 674 aaPredicted RBP10.66□□□□□ -0.7
FARP1-239ENST00000602171 CTHP32929 405 aa10.66□□□□□ -0.7
FARP1-239ENST00000602171 NFX1Q12986 1120 aaKnown RBP10.66□□□□□ -0.7
FARP1-239ENST00000602171 RIC3Q7Z5B4 369 aa10.66□□□□□ -0.7
FARP1-239ENST00000602171 NEURL4Q96JN8 1562 aa10.65□□□□□ -0.7
FARP1-239ENST00000602171 RGL3Q3MIN7 710 aa10.65□□□□□ -0.7
FARP1-239ENST00000602171 LINC01559Q495D7 138 aa10.65□□□□□ -0.7
FARP1-239ENST00000602171 TXNDC2Q86VQ3 553 aa10.65□□□□□ -0.7
FARP1-239ENST00000602171 BCANQ96GW7 911 aa10.65□□□□□ -0.7
FARP1-239ENST00000602171 CLTCL1P53675 1640 aa10.65□□□□□ -0.7
FARP1-239ENST00000602171 TERTO14746 1132 aaKnown RBP10.64□□□□□ -0.71
FARP1-239ENST00000602171 HSPA2P54652 639 aa10.64□□□□□ -0.71
FARP1-239ENST00000602171 NEUROD1Q13562 356 aa10.64□□□□□ -0.71
FARP1-239ENST00000602171 PCDHB15Q9Y5E8 787 aa10.64□□□□□ -0.71
FARP1-239ENST00000602171 TMEM131LA2VDJ0 1609 aa10.64□□□□□ -0.71
FARP1-239ENST00000602171 UBR1Q8IWV7 1749 aa10.64□□□□□ -0.71
FARP1-239ENST00000602171 SLIT1O75093 1534 aa10.63□□□□□ -0.71
FARP1-239ENST00000602171 RIMS2Q9UQ26 1411 aa10.63□□□□□ -0.71
FARP1-239ENST00000602171 KIF1BO60333 1816 aa10.63□□□□□ -0.71
FARP1-239ENST00000602171 ARHGAP23Q9P227 1491 aa10.62□□□□□ -0.71
FARP1-239ENST00000602171 SPATA31E1Q6ZUB1 1445 aa10.62□□□□□ -0.71
FARP1-239ENST00000602171 CFAP99D6REC4 459 aa10.62□□□□□ -0.71
FARP1-239ENST00000602171 WIPF1O43516 503 aa10.62□□□□□ -0.71
FARP1-239ENST00000602171 TUSC1Q2TAM9 212 aa10.62□□□□□ -0.71
FARP1-239ENST00000602171 FAM174AQ8TBP5 190 aa10.62□□□□□ -0.71
FARP1-239ENST00000602171 SIN3AQ96ST3 1273 aa10.62□□□□□ -0.71
FARP1-239ENST00000602171 TIMELESSQ9UNS1 1208 aa10.62□□□□□ -0.71
FARP1-239ENST00000602171 SCAF11Q99590 1463 aaKnown RBP10.61□□□□□ -0.71
FARP1-239ENST00000602171 INSM1Q01101 510 aaPredicted RBP10.61□□□□□ -0.71
FARP1-239ENST00000602171 TONSLQ96HA7 1378 aa10.61□□□□□ -0.71
FARP1-239ENST00000602171 ZFYVE9O95405 1425 aa10.6□□□□□ -0.71
FARP1-239ENST00000602171 LTKP29376 864 aa10.6□□□□□ -0.71
FARP1-239ENST00000602171 PDE4DQ08499 809 aa10.6□□□□□ -0.71
FARP1-239ENST00000602171 DCAF11Q8TEB1 546 aa10.6□□□□□ -0.71
FARP1-239ENST00000602171 SLC16A10Q8TF71 515 aa10.6□□□□□ -0.71
FARP1-239ENST00000602171 ARMC2Q8NEN0 867 aa10.59□□□□□ -0.71
FARP1-239ENST00000602171 TLL2Q9Y6L7 1015 aa10.59□□□□□ -0.71
FARP1-239ENST00000602171 PLEKHG1Q9ULL1 1385 aa10.59□□□□□ -0.71
FARP1-239ENST00000602171 MED14O60244 1454 aa10.58□□□□□ -0.72
FARP1-239ENST00000602171 NUTM2BA6NNL0 878 aaPredicted RBP10.58□□□□□ -0.72
FARP1-239ENST00000602171 NUTM2EB1AL46 878 aaPredicted RBP10.58□□□□□ -0.72
FARP1-239ENST00000602171 F12P00748 615 aaPredicted RBP10.58□□□□□ -0.72
FARP1-239ENST00000602171 NNTQ13423 1086 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms