RNA–Protein interactions for RNA: ENST00000602164.5

USF2-215, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 3

Gene USF2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-215ENST00000602164 NFATC2IPQ8NCF5 419 aa35.76■■■■□ 3.32
USF2-215ENST00000602164 SLC52A2Q9HAB3 445 aa35.75■■■■□ 3.31
USF2-215ENST00000602164 TUBGCP6Q96RT7 1819 aa35.75■■■■□ 3.31
USF2-215ENST00000602164 QSER1Q2KHR3 1735 aa35.74■■■■□ 3.31
USF2-215ENST00000602164 PLEKHF1Q96S99 279 aa35.74■■■■□ 3.31
USF2-215ENST00000602164 ZNF831Q5JPB2 1677 aa35.74■■■■□ 3.31
USF2-215ENST00000602164 GNAT3A8MTJ3 354 aa35.73■■■■□ 3.31
USF2-215ENST00000602164 LOC102724428A0A0B4J2F2 783 aa35.72■■■■□ 3.31
USF2-215ENST00000602164 SIK1P57059 783 aa35.72■■■■□ 3.31
USF2-215ENST00000602164 PDGFDQ9GZP0 370 aaPredicted RBP35.72■■■■□ 3.31
USF2-215ENST00000602164 IL17REQ8NFR9 667 aa35.71■■■■□ 3.31
USF2-215ENST00000602164 SIPA1L3O60292 1781 aaPredicted RBP35.7■■■■□ 3.31
USF2-215ENST00000602164 CEMIPQ8WUJ3 1361 aa35.7■■■■□ 3.31
USF2-215ENST00000602164 C4BP0C0L5 1744 aa35.69■■■■□ 3.3
USF2-215ENST00000602164 SLC4A9Q96Q91 983 aa35.69■■■■□ 3.3
USF2-215ENST00000602164 SRCAPQ6ZRS2 3230 aa35.69■■■■□ 3.3
USF2-215ENST00000602164 CICQ96RK0 1608 aaPredicted RBP35.67■■■■□ 3.3
USF2-215ENST00000602164 ITPK1Q13572 414 aa35.66■■■■□ 3.3
USF2-215ENST00000602164 DLG5Q8TDM6 1919 aa35.63■■■■□ 3.29
USF2-215ENST00000602164 COL5A3P25940 1745 aaPredicted RBP35.63■■■■□ 3.29
USF2-215ENST00000602164 PNPLA7Q6ZV29 1317 aa35.63■■■■□ 3.29
USF2-215ENST00000602164 LINC00116Q8NCU8 138 aa35.63■■■■□ 3.29
USF2-215ENST00000602164 KCPQ6ZWJ8 1503 aa35.62■■■■□ 3.29
USF2-215ENST00000602164 UBR2Q8IWV8 1755 aa35.61■■■■□ 3.29
USF2-215ENST00000602164 TJP1Q07157 1748 aa35.61■■■■□ 3.29
USF2-215ENST00000602164 ATP6V1AP38606 617 aa35.61■■■■□ 3.29
USF2-215ENST00000602164 RBM42Q9BTD8 480 aaKnown RBP35.6■■■■□ 3.29
USF2-215ENST00000602164 PNNQ9H307 717 aaKnown RBP35.6■■■■□ 3.29
USF2-215ENST00000602164 HMGB2P26583 209 aaKnown RBP35.59■■■■□ 3.29
USF2-215ENST00000602164 TFCP2L1Q9NZI6 479 aa35.59■■■■□ 3.29
USF2-215ENST00000602164 UBR3Q6ZT12 1888 aa35.58■■■■□ 3.29
USF2-215ENST00000602164 HTATSF1O43719 755 aaKnown RBP35.58■■■■□ 3.29
USF2-215ENST00000602164 NEFMP07197 916 aa35.58■■■■□ 3.29
USF2-215ENST00000602164 SLC39A6Q13433 755 aa35.58■■■■□ 3.29
USF2-215ENST00000602164 PTCD1O75127 700 aaKnown RBP35.57■■■■□ 3.28
USF2-215ENST00000602164 TEFQ10587 303 aa35.57■■■■□ 3.28
USF2-215ENST00000602164 NFE2L2Q16236 605 aa35.57■■■■□ 3.28
USF2-215ENST00000602164 CCDC184Q52MB2 194 aa35.57■■■■□ 3.28
USF2-215ENST00000602164 MAPK8IP3Q9UPT6 1336 aa35.57■■■■□ 3.28
USF2-215ENST00000602164 WDR43Q15061 677 aaKnown RBP eCLIP35.56■■■■□ 3.28
USF2-215ENST00000602164 MCM10Q7L590 875 aa35.56■■■■□ 3.28
USF2-215ENST00000602164 ANP32CO43423 234 aa35.55■■■■□ 3.28
USF2-215ENST00000602164 AMIGO3Q86WK7 504 aa35.55■■■■□ 3.28
USF2-215ENST00000602164 ADAMTS8Q9UP79 889 aa35.55■■■■□ 3.28
USF2-215ENST00000602164 ZBTB7AO95365 584 aa35.54■■■■□ 3.28
USF2-215ENST00000602164 DCTN1Q14203 1278 aa35.54■■■■□ 3.28
USF2-215ENST00000602164 RTF1Q92541 710 aaKnown RBP35.54■■■■□ 3.28
USF2-215ENST00000602164 AK7Q96M32 723 aa35.52■■■■□ 3.28
USF2-215ENST00000602164 SPON1Q9HCB6 807 aa35.52■■■■□ 3.28
USF2-215ENST00000602164 COL24A1Q17RW2 1714 aa35.51■■■■□ 3.27
USF2-215ENST00000602164 COL23A1Q86Y22 540 aaPredicted RBP35.5■■■■□ 3.27
USF2-215ENST00000602164 MTFR1LQ9H019 292 aa35.5■■■■□ 3.27
USF2-215ENST00000602164 CCDC146Q8IYE0 955 aa35.49■■■■□ 3.27
USF2-215ENST00000602164 CNTNAP4Q9C0A0 1308 aa35.49■■■■□ 3.27
USF2-215ENST00000602164 MYH14Q7Z406 1995 aaKnown RBP35.49■■■■□ 3.27
USF2-215ENST00000602164 ZNF790Q6PG37 636 aa35.48■■■■□ 3.27
USF2-215ENST00000602164 PTGER2P43116 358 aa35.47■■■■□ 3.27
USF2-215ENST00000602164 SLC16A10Q8TF71 515 aa35.47■■■■□ 3.27
USF2-215ENST00000602164 RC3H1Q5TC82 1133 aaKnown RBP35.46■■■■□ 3.27
USF2-215ENST00000602164 SMIM5Q71RC9 77 aa35.46■■■■□ 3.27
USF2-215ENST00000602164 RUNDC1Q96C34 613 aa35.46■■■■□ 3.27
USF2-215ENST00000602164 SGIP1Q9BQI5 828 aa35.46■■■■□ 3.27
USF2-215ENST00000602164 TMPOP42166 694 aaKnown RBP35.45■■■■□ 3.27
USF2-215ENST00000602164 ATF5Q9Y2D1 282 aaPredicted RBP35.45■■■■□ 3.27
USF2-215ENST00000602164 GNPATO15228 680 aa35.44■■■■□ 3.26
USF2-215ENST00000602164 SSFA2P28290 1259 aa35.44■■■■□ 3.26
USF2-215ENST00000602164 DNAJC10Q8IXB1 793 aa35.44■■■■□ 3.26
USF2-215ENST00000602164 TTC5Q8N0Z6 440 aa35.44■■■■□ 3.26
USF2-215ENST00000602164 FLAD1Q8NFF5 587 aa35.44■■■■□ 3.26
USF2-215ENST00000602164 BTBD11A6QL63 1104 aa35.43■■■■□ 3.26
USF2-215ENST00000602164 KCNQ3O43525 872 aa35.43■■■■□ 3.26
USF2-215ENST00000602164 VSIG10Q8N0Z9 540 aa35.43■■■■□ 3.26
USF2-215ENST00000602164 ZNF496Q96IT1 587 aaPredicted RBP35.43■■■■□ 3.26
USF2-215ENST00000602164 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.42■■■■□ 3.26
USF2-215ENST00000602164 THUMPD2Q9BTF0 503 aaKnown RBP35.42■■■■□ 3.26
USF2-215ENST00000602164 HEG1Q9ULI3 1381 aa35.41■■■■□ 3.26
USF2-215ENST00000602164 CRKLP46109 303 aaKnown RBP35.41■■■■□ 3.26
USF2-215ENST00000602164 RIPK4P57078 832 aa35.41■■■■□ 3.26
USF2-215ENST00000602164 PHF14O94880 888 aa35.4■■■■□ 3.26
USF2-215ENST00000602164 KDM3BQ7LBC6 1761 aa35.4■■■■□ 3.26
USF2-215ENST00000602164 RRP7AQ9Y3A4 280 aaKnown RBP35.39■■■■□ 3.26
USF2-215ENST00000602164 CYP19A1P11511 503 aaPredicted RBP35.38■■■■□ 3.25
USF2-215ENST00000602164 TAF7Q15545 349 aaPredicted RBP35.38■■■■□ 3.25
USF2-215ENST00000602164 RPS6KA4O75676 772 aa35.37■■■■□ 3.25
USF2-215ENST00000602164 INTS5Q6P9B9 1019 aaKnown RBP35.37■■■■□ 3.25
USF2-215ENST00000602164 PNISRQ8TF01 805 aaKnown RBP35.37■■■■□ 3.25
USF2-215ENST00000602164 MRS2Q9HD23 443 aa35.37■■■■□ 3.25
USF2-215ENST00000602164 MSH5O43196 834 aa35.36■■■■□ 3.25
USF2-215ENST00000602164 RTCBQ9Y3I0 505 aaKnown RBP35.36■■■■□ 3.25
USF2-215ENST00000602164 C4AP0C0L4 1744 aa35.35■■■■□ 3.25
USF2-215ENST00000602164 FMNL2Q96PY5 1086 aa35.35■■■■□ 3.25
USF2-215ENST00000602164 LMOD3Q0VAK6 560 aa35.33■■■■□ 3.25
USF2-215ENST00000602164 CCDC87Q9NVE4 849 aa35.33■■■■□ 3.25
USF2-215ENST00000602164 TRIM35Q9UPQ4 493 aa35.33■■■■□ 3.25
USF2-215ENST00000602164 ADRA2BP18089 450 aa35.32■■■■□ 3.24
USF2-215ENST00000602164 MIS18AQ9NYP9 233 aa35.32■■■■□ 3.24
USF2-215ENST00000602164 NEUROD2Q15784 382 aa35.3■■■■□ 3.24
USF2-215ENST00000602164 MSL1Q68DK7 614 aa35.29■■■■□ 3.24
USF2-215ENST00000602164 ARHGEF1Q92888 912 aaKnown RBP35.29■■■■□ 3.24
USF2-215ENST00000602164 TRAPPC3LQ5T215 181 aa35.28■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms