RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 C8orf58Q8NAV2 365 aa29.09■■■□□ 2.25
IRF3-228ENST00000601291 KDM3BQ7LBC6 1761 aa29.09■■■□□ 2.25
IRF3-228ENST00000601291 TRPC5Q9UL62 973 aaPredicted RBP29.08■■■□□ 2.25
IRF3-228ENST00000601291 CABP4P57796 275 aa29.07■■■□□ 2.24
IRF3-228ENST00000601291 TSPYL6Q8N831 410 aa29.07■■■□□ 2.24
IRF3-228ENST00000601291 ERVV-2B6SEH9 535 aa29.06■■■□□ 2.24
IRF3-228ENST00000601291 ELL2O00472 640 aaPredicted RBP29.06■■■□□ 2.24
IRF3-228ENST00000601291 VAMP4O75379 141 aa29.06■■■□□ 2.24
IRF3-228ENST00000601291 FAM98CQ17RN3 349 aaKnown RBP29.06■■■□□ 2.24
IRF3-228ENST00000601291 ATRNO75882 1429 aa29.06■■■□□ 2.24
IRF3-228ENST00000601291 BCAR3O75815 825 aa29.05■■■□□ 2.24
IRF3-228ENST00000601291 ALDH1L2Q3SY69 923 aa29.05■■■□□ 2.24
IRF3-228ENST00000601291 NFATC2IPQ8NCF5 419 aa29.05■■■□□ 2.24
IRF3-228ENST00000601291 SOS1Q07889 1333 aaPredicted RBP29.04■■■□□ 2.24
IRF3-228ENST00000601291 GJD4Q96KN9 370 aaPredicted RBP29.04■■■□□ 2.24
IRF3-228ENST00000601291 SMC4Q9NTJ3 1288 aa29.04■■■□□ 2.24
IRF3-228ENST00000601291 FKBP8Q14318 412 aa29.03■■■□□ 2.24
IRF3-228ENST00000601291 KRT24Q2M2I5 525 aa29.02■■■□□ 2.24
IRF3-228ENST00000601291 BCL2L13Q9BXK5 485 aa29.01■■■□□ 2.24
IRF3-228ENST00000601291 GLI3P10071 1580 aa29.01■■■□□ 2.23
IRF3-228ENST00000601291 CANXP27824 592 aaKnown RBP29.01■■■□□ 2.23
IRF3-228ENST00000601291 EIF4A1P60842 406 aaKnown RBP29.01■■■□□ 2.23
IRF3-228ENST00000601291 SSH1Q8WYL5 1049 aa29.01■■■□□ 2.23
IRF3-228ENST00000601291 A0A0G2JS52 829 aa29■■■□□ 2.23
IRF3-228ENST00000601291 IRX6P78412 446 aaPredicted RBP29■■■□□ 2.23
IRF3-228ENST00000601291 MYT1Q01538 1121 aa29■■■□□ 2.23
IRF3-228ENST00000601291 THSD7AQ9UPZ6 1657 aa28.99■■■□□ 2.23
IRF3-228ENST00000601291 TOGARAM1Q9Y4F4 1720 aa28.99■■■□□ 2.23
IRF3-228ENST00000601291 PLIN1O60240 522 aa28.98■■■□□ 2.23
IRF3-228ENST00000601291 ZNF790Q6PG37 636 aa28.98■■■□□ 2.23
IRF3-228ENST00000601291 TTC5Q8N0Z6 440 aa28.97■■■□□ 2.23
IRF3-228ENST00000601291 QTRT2Q9H974 415 aaKnown RBP28.97■■■□□ 2.23
IRF3-228ENST00000601291 KIF16BQ96L93 1317 aa28.97■■■□□ 2.23
IRF3-228ENST00000601291 KCNQ3O43525 872 aa28.96■■■□□ 2.23
IRF3-228ENST00000601291 HOXB7P09629 217 aa28.96■■■□□ 2.23
IRF3-228ENST00000601291 TMOD3Q9NYL9 352 aa28.96■■■□□ 2.23
IRF3-228ENST00000601291 FRAT1Q92837 279 aaPredicted RBP28.96■■■□□ 2.23
IRF3-228ENST00000601291 CHMP4AQ9BY43 222 aa28.96■■■□□ 2.23
IRF3-228ENST00000601291 ZNF772Q68DY9 489 aaPredicted RBP28.95■■■□□ 2.22
IRF3-228ENST00000601291 BRPF1P55201 1214 aaPredicted RBP28.94■■■□□ 2.22
IRF3-228ENST00000601291 MARCH10Q8NA82 808 aaPredicted RBP28.94■■■□□ 2.22
IRF3-228ENST00000601291 SLC39A6Q13433 755 aa28.93■■■□□ 2.22
IRF3-228ENST00000601291 ERICH6BQ5W0A0 696 aa28.92■■■□□ 2.22
IRF3-228ENST00000601291 MRPL50Q8N5N7 158 aaKnown RBP28.92■■■□□ 2.22
IRF3-228ENST00000601291 HEG1Q9ULI3 1381 aa28.92■■■□□ 2.22
IRF3-228ENST00000601291 CCDC30Q5VVM6 783 aa28.91■■■□□ 2.22
IRF3-228ENST00000601291 ZKSCAN2Q63HK3 967 aa28.91■■■□□ 2.22
IRF3-228ENST00000601291 PAPPAQ13219 1627 aa28.91■■■□□ 2.22
IRF3-228ENST00000601291 DOT1LQ8TEK3 1739 aa28.91■■■□□ 2.22
IRF3-228ENST00000601291 IPO8O15397 1037 aaKnown RBP28.9■■■□□ 2.22
IRF3-228ENST00000601291 ONECUT3O60422 494 aaPredicted RBP28.9■■■□□ 2.22
IRF3-228ENST00000601291 FMNL2Q96PY5 1086 aa28.89■■■□□ 2.22
IRF3-228ENST00000601291 STK31Q9BXU1 1019 aa28.89■■■□□ 2.22
IRF3-228ENST00000601291 TCERG1O14776 1098 aaKnown RBP28.88■■■□□ 2.21
IRF3-228ENST00000601291 HDGFL1Q5TGJ6 251 aa28.88■■■□□ 2.21
IRF3-228ENST00000601291 GIGYF1O75420 1035 aaPredicted RBP28.88■■■□□ 2.21
IRF3-228ENST00000601291 MS4A1P11836 297 aa28.88■■■□□ 2.21
IRF3-228ENST00000601291 PDE3AQ14432 1141 aa28.88■■■□□ 2.21
IRF3-228ENST00000601291 NOB1Q9ULX3 412 aaKnown RBP28.88■■■□□ 2.21
IRF3-228ENST00000601291 ITGB4P16144 1822 aa28.87■■■□□ 2.21
IRF3-228ENST00000601291 BCL9O00512 1426 aa28.87■■■□□ 2.21
IRF3-228ENST00000601291 SYTL4Q96C24 671 aaPredicted RBP28.87■■■□□ 2.21
IRF3-228ENST00000601291 PIGBQ92521 554 aa28.86■■■□□ 2.21
IRF3-228ENST00000601291 ZNF496Q96IT1 587 aaPredicted RBP28.86■■■□□ 2.21
IRF3-228ENST00000601291 C20orf194Q5TEA3 1177 aa28.85■■■□□ 2.21
IRF3-228ENST00000601291 SEPT12Q8IYM1 358 aa28.85■■■□□ 2.21
IRF3-228ENST00000601291 UBR2Q8IWV8 1755 aa28.85■■■□□ 2.21
IRF3-228ENST00000601291 ATF7IPQ6VMQ6 1270 aa28.84■■■□□ 2.21
IRF3-228ENST00000601291 SNRPA1P09661 255 aaKnown RBP28.84■■■□□ 2.21
IRF3-228ENST00000601291 PRIM1P49642 420 aaKnown RBP28.84■■■□□ 2.21
IRF3-228ENST00000601291 ARHGAP45Q92619 1136 aa28.84■■■□□ 2.21
IRF3-228ENST00000601291 SLC4A2P04920 1241 aa28.83■■■□□ 2.21
IRF3-228ENST00000601291 EIF2S2P20042 333 aaKnown RBP28.83■■■□□ 2.21
IRF3-228ENST00000601291 FTSJ3Q8IY81 847 aaKnown RBP28.83■■■□□ 2.21
IRF3-228ENST00000601291 NECTIN2Q92692 538 aa28.83■■■□□ 2.21
IRF3-228ENST00000601291 KCPQ6ZWJ8 1503 aa28.83■■■□□ 2.21
IRF3-228ENST00000601291 TRIM27P14373 513 aa28.81■■■□□ 2.2
IRF3-228ENST00000601291 RBM6P78332 1123 aaKnown RBP28.81■■■□□ 2.2
IRF3-228ENST00000601291 ACSBG1Q96GR2 724 aa28.8■■■□□ 2.2
IRF3-228ENST00000601291 PTPRCP08575 1304 aa28.8■■■□□ 2.2
IRF3-228ENST00000601291 C5P01031 1676 aa28.8■■■□□ 2.2
IRF3-228ENST00000601291 DZIP1LQ8IYY4 767 aaKnown RBP28.79■■■□□ 2.2
IRF3-228ENST00000601291 CRBNQ96SW2 442 aa28.79■■■□□ 2.2
IRF3-228ENST00000601291 API5Q9BZZ5 524 aaKnown RBP28.79■■■□□ 2.2
IRF3-228ENST00000601291 ATG3Q9NT62 314 aa28.79■■■□□ 2.2
IRF3-228ENST00000601291 PANK1Q8TE04 598 aa28.78■■■□□ 2.2
IRF3-228ENST00000601291 CLUAP1Q96AJ1 413 aa28.78■■■□□ 2.2
IRF3-228ENST00000601291 ASAP1Q9ULH1 1129 aa28.78■■■□□ 2.2
IRF3-228ENST00000601291 LAMB4A4D0S4 1761 aa28.77■■■□□ 2.2
IRF3-228ENST00000601291 PRAMEF22A3QJZ6 481 aa28.77■■■□□ 2.2
IRF3-228ENST00000601291 PTCD1O75127 700 aaKnown RBP28.77■■■□□ 2.2
IRF3-228ENST00000601291 EXOC6Q8TAG9 804 aa28.77■■■□□ 2.2
IRF3-228ENST00000601291 DBF4Q9UBU7 674 aaPredicted RBP28.77■■■□□ 2.2
IRF3-228ENST00000601291 CHPF2Q9P2E5 772 aa28.75■■■□□ 2.19
IRF3-228ENST00000601291 TNNQ9UQP3 1299 aa28.75■■■□□ 2.19
IRF3-228ENST00000601291 CACNA1FO60840 1977 aa28.74■■■□□ 2.19
IRF3-228ENST00000601291 VSIG10Q8N0Z9 540 aa28.74■■■□□ 2.19
IRF3-228ENST00000601291 RLBP1P12271 317 aa28.73■■■□□ 2.19
IRF3-228ENST00000601291 FLIIQ13045 1269 aa28.72■■■□□ 2.19
IRF3-228ENST00000601291 PPP4R2Q9NY27 417 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms