RNA–Protein interactions for RNA: ENST00000601169.1

NPAS1-206, Transcript of neuronal PAS domain protein 1, humanhuman

TSL 3

Gene NPAS1, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-206ENST00000601169 CCDC27Q2M243 656 aa21.8■■□□□ 1.08
NPAS1-206ENST00000601169 NCBP3Q53F19 620 aaKnown RBP21.79■■□□□ 1.08
NPAS1-206ENST00000601169 WWC1Q8IX03 1113 aa21.78■■□□□ 1.08
NPAS1-206ENST00000601169 APBA3O96018 575 aa21.76■■□□□ 1.07
NPAS1-206ENST00000601169 UPF1Q92900 1129 aaKnown RBP eCLIP21.76■■□□□ 1.07
NPAS1-206ENST00000601169 ASAP1Q9ULH1 1129 aa21.76■■□□□ 1.07
NPAS1-206ENST00000601169 HNRNPUQ00839 825 aaKnown RBP eCLIP21.75■■□□□ 1.07
NPAS1-206ENST00000601169 SLC39A6Q13433 755 aa21.75■■□□□ 1.07
NPAS1-206ENST00000601169 TAF7Q15545 349 aaPredicted RBP21.75■■□□□ 1.07
NPAS1-206ENST00000601169 NGEFQ8N5V2 710 aa21.75■■□□□ 1.07
NPAS1-206ENST00000601169 ATG3Q9NT62 314 aa21.75■■□□□ 1.07
NPAS1-206ENST00000601169 MIS18AQ9NYP9 233 aa21.75■■□□□ 1.07
NPAS1-206ENST00000601169 PAPPAQ13219 1627 aa21.75■■□□□ 1.07
NPAS1-206ENST00000601169 BTBD11A6QL63 1104 aa21.74■■□□□ 1.07
NPAS1-206ENST00000601169 ZNF521Q96K83 1311 aa21.73■■□□□ 1.07
NPAS1-206ENST00000601169 KCNQ3O43525 872 aa21.72■■□□□ 1.07
NPAS1-206ENST00000601169 SF3B2Q13435 895 aaKnown RBP21.72■■□□□ 1.07
NPAS1-206ENST00000601169 CCDC125Q86Z20 511 aa21.72■■□□□ 1.07
NPAS1-206ENST00000601169 LAS1LQ9Y4W2 734 aaKnown RBP21.72■■□□□ 1.07
NPAS1-206ENST00000601169 KDM3BQ7LBC6 1761 aa21.71■■□□□ 1.07
NPAS1-206ENST00000601169 DEFB132Q7Z7B7 95 aa21.71■■□□□ 1.07
NPAS1-206ENST00000601169 PALLDQ8WX93 1383 aa21.71■■□□□ 1.07
NPAS1-206ENST00000601169 LY75O60449 1722 aa21.7■■□□□ 1.06
NPAS1-206ENST00000601169 WDR63Q8IWG1 891 aa21.7■■□□□ 1.06
NPAS1-206ENST00000601169 UBR2Q8IWV8 1755 aa21.69■■□□□ 1.06
NPAS1-206ENST00000601169 ZNF853P0CG23 659 aa21.69■■□□□ 1.06
NPAS1-206ENST00000601169 CALD1Q05682 793 aaKnown RBP21.69■■□□□ 1.06
NPAS1-206ENST00000601169 EN1Q05925 392 aaPredicted RBP21.69■■□□□ 1.06
NPAS1-206ENST00000601169 ZNF790Q6PG37 636 aa21.69■■□□□ 1.06
NPAS1-206ENST00000601169 SMARCC1Q92922 1105 aaPredicted RBP21.69■■□□□ 1.06
NPAS1-206ENST00000601169 CFAP44Q96MT7 982 aa21.69■■□□□ 1.06
NPAS1-206ENST00000601169 CHL1O00533 1208 aa21.68■■□□□ 1.06
NPAS1-206ENST00000601169 PLSCR1O15162 318 aa21.68■■□□□ 1.06
NPAS1-206ENST00000601169 SPINK5Q9NQ38 1064 aaPredicted RBP21.68■■□□□ 1.06
NPAS1-206ENST00000601169 IFT57Q9NWB7 429 aa21.68■■□□□ 1.06
NPAS1-206ENST00000601169 TSPYL4Q9UJ04 414 aa21.68■■□□□ 1.06
NPAS1-206ENST00000601169 KCPQ6ZWJ8 1503 aa21.68■■□□□ 1.06
NPAS1-206ENST00000601169 RGPD3A6NKT7 1758 aaPredicted RBP21.67■■□□□ 1.06
NPAS1-206ENST00000601169 RGPD4Q7Z3J3 1758 aa21.67■■□□□ 1.06
NPAS1-206ENST00000601169 PTCD1O75127 700 aaKnown RBP21.67■■□□□ 1.06
NPAS1-206ENST00000601169 BAG6P46379 1132 aa21.67■■□□□ 1.06
NPAS1-206ENST00000601169 TTC5Q8N0Z6 440 aa21.67■■□□□ 1.06
NPAS1-206ENST00000601169 RBM42Q9BTD8 480 aaKnown RBP21.67■■□□□ 1.06
NPAS1-206ENST00000601169 IL16Q14005 1332 aa21.66■■□□□ 1.06
NPAS1-206ENST00000601169 GNAI1P63096 354 aa21.66■■□□□ 1.06
NPAS1-206ENST00000601169 EZH2Q15910 746 aaKnown RBP21.66■■□□□ 1.06
NPAS1-206ENST00000601169 PROM2Q8N271 834 aa21.66■■□□□ 1.06
NPAS1-206ENST00000601169 CAMKK2Q96RR4 588 aa21.66■■□□□ 1.06
NPAS1-206ENST00000601169 MBIPQ9NS73 344 aa21.66■■□□□ 1.06
NPAS1-206ENST00000601169 BABAM1Q9NWV8 329 aa21.66■■□□□ 1.06
NPAS1-206ENST00000601169 KCNQ4P56696 695 aa21.65■■□□□ 1.06
NPAS1-206ENST00000601169 ZNF496Q96IT1 587 aaPredicted RBP21.65■■□□□ 1.06
NPAS1-206ENST00000601169 SLC4A9Q96Q91 983 aa21.65■■□□□ 1.06
NPAS1-206ENST00000601169 LOC102724428A0A0B4J2F2 783 aa21.64■■□□□ 1.05
NPAS1-206ENST00000601169 SIK1P57059 783 aa21.64■■□□□ 1.05
NPAS1-206ENST00000601169 TXNRD1Q16881 649 aa21.64■■□□□ 1.05
NPAS1-206ENST00000601169 TSR2Q969E8 191 aaKnown RBP21.64■■□□□ 1.05
NPAS1-206ENST00000601169 YTHDC1Q96MU7 727 aaKnown RBP21.64■■□□□ 1.05
NPAS1-206ENST00000601169 EIF4A1P60842 406 aaKnown RBP21.63■■□□□ 1.05
NPAS1-206ENST00000601169 GOLGA2Q08379 1002 aa21.63■■□□□ 1.05
NPAS1-206ENST00000601169 CDCA7LQ96GN5 454 aa21.63■■□□□ 1.05
NPAS1-206ENST00000601169 CCNL1Q9UK58 526 aaPredicted RBP21.63■■□□□ 1.05
NPAS1-206ENST00000601169 ZBED9Q6R2W3 1325 aa21.62■■□□□ 1.05
NPAS1-206ENST00000601169 FMNL2Q96PY5 1086 aa21.62■■□□□ 1.05
NPAS1-206ENST00000601169 LRRC4BQ9NT99 713 aa21.62■■□□□ 1.05
NPAS1-206ENST00000601169 TJP1Q07157 1748 aa21.61■■□□□ 1.05
NPAS1-206ENST00000601169 RREB1Q92766 1687 aa21.61■■□□□ 1.05
NPAS1-206ENST00000601169 ATP6V1AP38606 617 aa21.61■■□□□ 1.05
NPAS1-206ENST00000601169 HEG1Q9ULI3 1381 aa21.61■■□□□ 1.05
NPAS1-206ENST00000601169 FANCIQ9NVI1 1328 aa21.6■■□□□ 1.05
NPAS1-206ENST00000601169 ZNF831Q5JPB2 1677 aa21.6■■□□□ 1.05
NPAS1-206ENST00000601169 ITPK1Q13572 414 aa21.6■■□□□ 1.05
NPAS1-206ENST00000601169 KRT24Q2M2I5 525 aa21.6■■□□□ 1.05
NPAS1-206ENST00000601169 TAF1LQ8IZX4 1826 aa21.59■■□□□ 1.05
NPAS1-206ENST00000601169 PRAMEF22A3QJZ6 481 aa21.59■■□□□ 1.05
NPAS1-206ENST00000601169 SLFN5Q08AF3 891 aa21.59■■□□□ 1.05
NPAS1-206ENST00000601169 SLC27A3Q5K4L6 730 aa21.59■■□□□ 1.05
NPAS1-206ENST00000601169 C5P01031 1676 aa21.59■■□□□ 1.05
NPAS1-206ENST00000601169 SOCS7O14512 581 aa21.58■■□□□ 1.05
NPAS1-206ENST00000601169 DNAJC10Q8IXB1 793 aa21.58■■□□□ 1.05
NPAS1-206ENST00000601169 CICQ96RK0 1608 aaPredicted RBP21.58■■□□□ 1.04
NPAS1-206ENST00000601169 NUP188Q5SRE5 1749 aa21.58■■□□□ 1.04
NPAS1-206ENST00000601169 E9PSI1 815 aa21.57■■□□□ 1.04
NPAS1-206ENST00000601169 VSIG10Q8N0Z9 540 aa21.57■■□□□ 1.04
NPAS1-206ENST00000601169 MYH16Q9H6N6 1097 aa21.57■■□□□ 1.04
NPAS1-206ENST00000601169 COL5A3P25940 1745 aaPredicted RBP21.57■■□□□ 1.04
NPAS1-206ENST00000601169 GIGYF1O75420 1035 aaPredicted RBP21.56■■□□□ 1.04
NPAS1-206ENST00000601169 LINC00116Q8NCU8 138 aa21.56■■□□□ 1.04
NPAS1-206ENST00000601169 SNRPA1P09661 255 aaKnown RBP21.55■■□□□ 1.04
NPAS1-206ENST00000601169 C8orf58Q8NAV2 365 aa21.55■■□□□ 1.04
NPAS1-206ENST00000601169 USP16Q9Y5T5 823 aa21.55■■□□□ 1.04
NPAS1-206ENST00000601169 ELL2O00472 640 aaPredicted RBP21.54■■□□□ 1.04
NPAS1-206ENST00000601169 TRMT2AQ8IZ69 625 aaKnown RBP21.54■■□□□ 1.04
NPAS1-206ENST00000601169 LAMB4A4D0S4 1761 aa21.53■■□□□ 1.04
NPAS1-206ENST00000601169 EXOSC9Q06265 439 aaKnown RBP21.53■■□□□ 1.04
NPAS1-206ENST00000601169 TSPYL6Q8N831 410 aa21.53■■□□□ 1.04
NPAS1-206ENST00000601169 C4BP0C0L5 1744 aa21.52■■□□□ 1.04
NPAS1-206ENST00000601169 CYP19A1P11511 503 aaPredicted RBP21.52■■□□□ 1.04
NPAS1-206ENST00000601169 DUSP27Q5VZP5 1158 aa21.52■■□□□ 1.04
NPAS1-206ENST00000601169 MYH14Q7Z406 1995 aaKnown RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms