RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 DCAF8L1A6NGE4 600 aa17.07■□□□□ 0.32
SYMPK-215ENST00000600237 STARD3NLO95772 234 aa17.07■□□□□ 0.32
SYMPK-215ENST00000600237 FKBP4Q02790 459 aaKnown RBP eCLIP17.07■□□□□ 0.32
SYMPK-215ENST00000600237 WASF1Q92558 559 aa17.07■□□□□ 0.32
SYMPK-215ENST00000600237 UQCRHLA0A096LP55 91 aa17.07■□□□□ 0.32
SYMPK-215ENST00000600237 UQCRHP07919 91 aa17.07■□□□□ 0.32
SYMPK-215ENST00000600237 SCAND2PQ9GZW5 306 aaPredicted RBP17.07■□□□□ 0.32
SYMPK-215ENST00000600237 RAPGEF6Q8TEU7 1601 aa17.07■□□□□ 0.32
SYMPK-215ENST00000600237 KRT18P05783 430 aaKnown RBP17.06■□□□□ 0.32
SYMPK-215ENST00000600237 SCAF11Q99590 1463 aaKnown RBP17.06■□□□□ 0.32
SYMPK-215ENST00000600237 SAMD1Q6SPF0 538 aaPredicted RBP17.06■□□□□ 0.32
SYMPK-215ENST00000600237 SYCE3A1L190 88 aa17.06■□□□□ 0.32
SYMPK-215ENST00000600237 RRP9O43818 475 aaKnown RBP17.06■□□□□ 0.32
SYMPK-215ENST00000600237 NSD2O96028 1365 aa17.05■□□□□ 0.32
SYMPK-215ENST00000600237 KIF2AO00139 706 aaPredicted RBP17.05■□□□□ 0.32
SYMPK-215ENST00000600237 THUMPD2Q9BTF0 503 aaKnown RBP17.05■□□□□ 0.32
SYMPK-215ENST00000600237 AXDND1Q5T1B0 1012 aaPredicted RBP17.05■□□□□ 0.32
SYMPK-215ENST00000600237 ZFYVE27Q5T4F4 411 aa17.05■□□□□ 0.32
SYMPK-215ENST00000600237 FILIP1Q7Z7B0 1213 aa17.05■□□□□ 0.32
SYMPK-215ENST00000600237 UBAC1Q9BSL1 405 aa17.05■□□□□ 0.32
SYMPK-215ENST00000600237 EIF3JO75822 258 aaKnown RBP17.04■□□□□ 0.32
SYMPK-215ENST00000600237 NUTM1Q86Y26 1132 aa17.04■□□□□ 0.32
SYMPK-215ENST00000600237 MPNDQ8N594 471 aa17.04■□□□□ 0.32
SYMPK-215ENST00000600237 U3KPZ7 1027 aaPredicted RBP17.04■□□□□ 0.32
SYMPK-215ENST00000600237 IMMTQ16891 758 aaKnown RBP17.04■□□□□ 0.32
SYMPK-215ENST00000600237 TBC1D2Q9BYX2 928 aa17.04■□□□□ 0.32
SYMPK-215ENST00000600237 TMOD3Q9NYL9 352 aa17.04■□□□□ 0.32
SYMPK-215ENST00000600237 SOGA3Q5TF21 947 aa17.03■□□□□ 0.32
SYMPK-215ENST00000600237 CADPS2Q86UW7 1296 aa17.03■□□□□ 0.32
SYMPK-215ENST00000600237 PDCL2Q8N4E4 241 aa17.03■□□□□ 0.32
SYMPK-215ENST00000600237 NUP133Q8WUM0 1156 aa17.03■□□□□ 0.32
SYMPK-215ENST00000600237 CCDC183Q5T5S1 534 aa17.03■□□□□ 0.32
SYMPK-215ENST00000600237 LARP1Q6PKG0 1096 aaKnown RBP17.03■□□□□ 0.32
SYMPK-215ENST00000600237 CCDC191Q8NCU4 936 aa17.03■□□□□ 0.32
SYMPK-215ENST00000600237 DEF6Q9H4E7 631 aa17.03■□□□□ 0.32
SYMPK-215ENST00000600237 SYCP1Q15431 976 aa17.03■□□□□ 0.32
SYMPK-215ENST00000600237 ERLIN2O94905 339 aa17.03■□□□□ 0.32
SYMPK-215ENST00000600237 BMP2KLQ5H9B9 411 aa17.03■□□□□ 0.32
SYMPK-215ENST00000600237 MCM10Q7L590 875 aa17.03■□□□□ 0.32
SYMPK-215ENST00000600237 PPP1R1BQ9UD71 204 aaPredicted RBP17.03■□□□□ 0.32
SYMPK-215ENST00000600237 TDO2P48775 406 aa17.02■□□□□ 0.32
SYMPK-215ENST00000600237 TAF7Q15545 349 aaPredicted RBP17.02■□□□□ 0.32
SYMPK-215ENST00000600237 KRT28Q7Z3Y7 464 aa17.02■□□□□ 0.32
SYMPK-215ENST00000600237 EMILIN1Q9Y6C2 1016 aa17.02■□□□□ 0.32
SYMPK-215ENST00000600237 TRIM27P14373 513 aa17.02■□□□□ 0.32
SYMPK-215ENST00000600237 WDR7Q9Y4E6 1490 aa17.02■□□□□ 0.31
SYMPK-215ENST00000600237 PTPRCP08575 1304 aa17.02■□□□□ 0.31
SYMPK-215ENST00000600237 CCDC83Q8IWF9 413 aa17.01■□□□□ 0.31
SYMPK-215ENST00000600237 A2MP01023 1474 aa17.01■□□□□ 0.31
SYMPK-215ENST00000600237 NUP153P49790 1475 aaKnown RBP17.01■□□□□ 0.31
SYMPK-215ENST00000600237 ZNF518AQ6AHZ1 1483 aa17.01■□□□□ 0.31
SYMPK-215ENST00000600237 ADAMTS2O95450 1211 aa17.01■□□□□ 0.31
SYMPK-215ENST00000600237 CCDC181Q5TID7 509 aa17.01■□□□□ 0.31
SYMPK-215ENST00000600237 CEP131Q9UPN4 1083 aa17.01■□□□□ 0.31
SYMPK-215ENST00000600237 PRPF40BQ6NWY9 871 aaKnown RBP17■□□□□ 0.31
SYMPK-215ENST00000600237 AKAP2Q9Y2D5 859 aa17■□□□□ 0.31
SYMPK-215ENST00000600237 HMGB1P09429 215 aaKnown RBP17■□□□□ 0.31
SYMPK-215ENST00000600237 IQCEQ6IPM2 695 aa17■□□□□ 0.31
SYMPK-215ENST00000600237 FERMT3Q86UX7 667 aa17■□□□□ 0.31
SYMPK-215ENST00000600237 BMP2KQ9NSY1 1161 aaPredicted RBP17■□□□□ 0.31
SYMPK-215ENST00000600237 GOLGA6L10A6NI86 522 aa17■□□□□ 0.31
SYMPK-215ENST00000600237 PTCD1O75127 700 aaKnown RBP17■□□□□ 0.31
SYMPK-215ENST00000600237 IL16Q14005 1332 aa17■□□□□ 0.31
SYMPK-215ENST00000600237 ANO10Q9NW15 660 aa17■□□□□ 0.31
SYMPK-215ENST00000600237 LIMCH1Q9UPQ0 1083 aa17■□□□□ 0.31
SYMPK-215ENST00000600237 USHBP1Q8N6Y0 703 aa17■□□□□ 0.31
SYMPK-215ENST00000600237 SMARCA5O60264 1052 aaPredicted RBP16.99■□□□□ 0.31
SYMPK-215ENST00000600237 DDX11Q96FC9 970 aa16.99■□□□□ 0.31
SYMPK-215ENST00000600237 MIS18AQ9NYP9 233 aa16.99■□□□□ 0.31
SYMPK-215ENST00000600237 DUOX2Q9NRD8 1548 aa16.99■□□□□ 0.31
SYMPK-215ENST00000600237 SFPQP23246 707 aaKnown RBP eCLIP16.99■□□□□ 0.31
SYMPK-215ENST00000600237 TNPO1Q92973 898 aaKnown RBP16.99■□□□□ 0.31
SYMPK-215ENST00000600237 TSPYL1Q9H0U9 437 aa16.99■□□□□ 0.31
SYMPK-215ENST00000600237 TTC21BQ7Z4L5 1316 aa16.99■□□□□ 0.31
SYMPK-215ENST00000600237 UHRF1BP1LA0JNW5 1464 aa16.99■□□□□ 0.31
SYMPK-215ENST00000600237 UBXN4Q92575 508 aa16.98■□□□□ 0.31
SYMPK-215ENST00000600237 AIDAQ96BJ3 306 aa16.98■□□□□ 0.31
SYMPK-215ENST00000600237 ZNF652Q9Y2D9 606 aa16.98■□□□□ 0.31
SYMPK-215ENST00000600237 CFAP100Q494V2 611 aa16.98■□□□□ 0.31
SYMPK-215ENST00000600237 IDH1O75874 414 aaKnown RBP16.98■□□□□ 0.31
SYMPK-215ENST00000600237 FAM177A1Q8N128 213 aaPredicted RBP16.98■□□□□ 0.31
SYMPK-215ENST00000600237 NGLY1Q96IV0 654 aa16.98■□□□□ 0.31
SYMPK-215ENST00000600237 CTAGE5O15320 804 aa16.97■□□□□ 0.31
SYMPK-215ENST00000600237 EPB41L2O43491 1005 aaKnown RBP16.97■□□□□ 0.31
SYMPK-215ENST00000600237 SSFA2P28290 1259 aa16.97■□□□□ 0.31
SYMPK-215ENST00000600237 IGHMBP2P38935 993 aaKnown RBP16.97■□□□□ 0.31
SYMPK-215ENST00000600237 DNAAF4Q8WXU2 420 aa16.97■□□□□ 0.31
SYMPK-215ENST00000600237 TBC1D32Q96NH3 1257 aa16.97■□□□□ 0.31
SYMPK-215ENST00000600237 TANGO6Q9C0B7 1094 aa16.97■□□□□ 0.31
SYMPK-215ENST00000600237 LRP2BPQ9P2M1 347 aa16.97■□□□□ 0.31
SYMPK-215ENST00000600237 ARHGAP29Q52LW3 1261 aa16.97■□□□□ 0.31
SYMPK-215ENST00000600237 ACEP12821 1306 aa16.96■□□□□ 0.31
SYMPK-215ENST00000600237 BICDL1Q6ZP65 573 aa16.96■□□□□ 0.31
SYMPK-215ENST00000600237 CCDC196A0A1B0GTZ2 297 aa16.96■□□□□ 0.31
SYMPK-215ENST00000600237 SKAP1Q86WV1 359 aa16.96■□□□□ 0.31
SYMPK-215ENST00000600237 UGGT2Q9NYU1 1516 aa16.96■□□□□ 0.31
SYMPK-215ENST00000600237 RAI14Q9P0K7 980 aa16.96■□□□□ 0.3
SYMPK-215ENST00000600237 PTPN14Q15678 1187 aa16.95■□□□□ 0.3
SYMPK-215ENST00000600237 BOLA2Q9H3K6 86 aa16.95■□□□□ 0.3
SYMPK-215ENST00000600237 EXOC5O00471 708 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms