RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 C4BP0C0L5 1744 aa15.99■□□□□ 0.15
ARHGEF1-216ENST00000598587 COL5A3P25940 1745 aaPredicted RBP15.99■□□□□ 0.15
ARHGEF1-216ENST00000598587 RNMTO43148 476 aaKnown RBP15.98■□□□□ 0.15
ARHGEF1-216ENST00000598587 R3HDM1Q15032 1099 aaKnown RBP15.98■□□□□ 0.15
ARHGEF1-216ENST00000598587 RTF1Q92541 710 aaKnown RBP15.98■□□□□ 0.15
ARHGEF1-216ENST00000598587 LRP5O75197 1615 aa15.97■□□□□ 0.15
ARHGEF1-216ENST00000598587 PHACTR3Q96KR7 559 aa15.97■□□□□ 0.15
ARHGEF1-216ENST00000598587 SLC52A2Q9HAB3 445 aa15.97■□□□□ 0.15
ARHGEF1-216ENST00000598587 PSDA5PKW4 1024 aaPredicted RBP15.96■□□□□ 0.15
ARHGEF1-216ENST00000598587 TEFQ10587 303 aa15.96■□□□□ 0.15
ARHGEF1-216ENST00000598587 NFATC2IPQ8NCF5 419 aa15.96■□□□□ 0.15
ARHGEF1-216ENST00000598587 UBR3Q6ZT12 1888 aa15.95■□□□□ 0.14
ARHGEF1-216ENST00000598587 TJP1Q07157 1748 aa15.95■□□□□ 0.14
ARHGEF1-216ENST00000598587 HTATSF1O43719 755 aaKnown RBP15.95■□□□□ 0.14
ARHGEF1-216ENST00000598587 SLC15A2Q16348 729 aa15.95■□□□□ 0.14
ARHGEF1-216ENST00000598587 LRRC4BQ9NT99 713 aa15.95■□□□□ 0.14
ARHGEF1-216ENST00000598587 ASAP1Q9ULH1 1129 aa15.95■□□□□ 0.14
ARHGEF1-216ENST00000598587 PLEKHF1Q96S99 279 aa15.94■□□□□ 0.14
ARHGEF1-216ENST00000598587 LGR6Q9HBX8 967 aa15.94■□□□□ 0.14
ARHGEF1-216ENST00000598587 ANO8Q9HCE9 1232 aaPredicted RBP15.94■□□□□ 0.14
ARHGEF1-216ENST00000598587 ATG3Q9NT62 314 aa15.94■□□□□ 0.14
ARHGEF1-216ENST00000598587 CEMIPQ8WUJ3 1361 aa15.94■□□□□ 0.14
ARHGEF1-216ENST00000598587 LOC102724428A0A0B4J2F2 783 aa15.93■□□□□ 0.14
ARHGEF1-216ENST00000598587 SIK1P57059 783 aa15.93■□□□□ 0.14
ARHGEF1-216ENST00000598587 ATP6V1AP38606 617 aa15.92■□□□□ 0.14
ARHGEF1-216ENST00000598587 NFE2L2Q16236 605 aa15.92■□□□□ 0.14
ARHGEF1-216ENST00000598587 TTC5Q8N0Z6 440 aa15.92■□□□□ 0.14
ARHGEF1-216ENST00000598587 RBM42Q9BTD8 480 aaKnown RBP15.92■□□□□ 0.14
ARHGEF1-216ENST00000598587 KDM3BQ7LBC6 1761 aa15.91■□□□□ 0.14
ARHGEF1-216ENST00000598587 LMOD3Q0VAK6 560 aa15.91■□□□□ 0.14
ARHGEF1-216ENST00000598587 RUNDC1Q96C34 613 aa15.91■□□□□ 0.14
ARHGEF1-216ENST00000598587 TFCP2L1Q9NZI6 479 aa15.91■□□□□ 0.14
ARHGEF1-216ENST00000598587 KCPQ6ZWJ8 1503 aa15.9■□□□□ 0.14
ARHGEF1-216ENST00000598587 KCNQ4P56696 695 aa15.9■□□□□ 0.14
ARHGEF1-216ENST00000598587 AKT1S1Q96B36 256 aa15.9■□□□□ 0.14
ARHGEF1-216ENST00000598587 AK7Q96M32 723 aa15.9■□□□□ 0.14
ARHGEF1-216ENST00000598587 MRS2Q9HD23 443 aa15.9■□□□□ 0.14
ARHGEF1-216ENST00000598587 ZNF827Q17R98 1081 aa15.89■□□□□ 0.13
ARHGEF1-216ENST00000598587 IL17REQ8NFR9 667 aa15.89■□□□□ 0.13
ARHGEF1-216ENST00000598587 ADAMTS8Q9UP79 889 aa15.89■□□□□ 0.13
ARHGEF1-216ENST00000598587 LAMB4A4D0S4 1761 aa15.88■□□□□ 0.13
ARHGEF1-216ENST00000598587 PTCD1O75127 700 aaKnown RBP15.88■□□□□ 0.13
ARHGEF1-216ENST00000598587 MCM10Q7L590 875 aa15.88■□□□□ 0.13
ARHGEF1-216ENST00000598587 FLAD1Q8NFF5 587 aa15.88■□□□□ 0.13
ARHGEF1-216ENST00000598587 BTBD11A6QL63 1104 aa15.87■□□□□ 0.13
ARHGEF1-216ENST00000598587 CCDC146Q8IYE0 955 aa15.87■□□□□ 0.13
ARHGEF1-216ENST00000598587 C4AP0C0L4 1744 aa15.86■□□□□ 0.13
ARHGEF1-216ENST00000598587 COL24A1Q17RW2 1714 aa15.86■□□□□ 0.13
ARHGEF1-216ENST00000598587 MYH14Q7Z406 1995 aaKnown RBP15.86■□□□□ 0.13
ARHGEF1-216ENST00000598587 TMPOP42166 694 aaKnown RBP15.86■□□□□ 0.13
ARHGEF1-216ENST00000598587 RIPK4P57078 832 aa15.86■□□□□ 0.13
ARHGEF1-216ENST00000598587 SLC39A6Q13433 755 aa15.85■□□□□ 0.13
ARHGEF1-216ENST00000598587 ITPK1Q13572 414 aa15.85■□□□□ 0.13
ARHGEF1-216ENST00000598587 ZNF790Q6PG37 636 aa15.85■□□□□ 0.13
ARHGEF1-216ENST00000598587 VSIG10Q8N0Z9 540 aa15.85■□□□□ 0.13
ARHGEF1-216ENST00000598587 LINC00116Q8NCU8 138 aa15.85■□□□□ 0.13
ARHGEF1-216ENST00000598587 PNISRQ8TF01 805 aaKnown RBP15.85■□□□□ 0.13
ARHGEF1-216ENST00000598587 PNPLA7Q6ZV29 1317 aa15.85■□□□□ 0.13
ARHGEF1-216ENST00000598587 CNTNAP4Q9C0A0 1308 aa15.85■□□□□ 0.13
ARHGEF1-216ENST00000598587 SSFA2P28290 1259 aa15.84■□□□□ 0.13
ARHGEF1-216ENST00000598587 DCTN1Q14203 1278 aa15.84■□□□□ 0.13
ARHGEF1-216ENST00000598587 TAF7Q15545 349 aaPredicted RBP15.84■□□□□ 0.13
ARHGEF1-216ENST00000598587 SLC16A10Q8TF71 515 aa15.84■□□□□ 0.13
ARHGEF1-216ENST00000598587 FMNL2Q96PY5 1086 aa15.84■□□□□ 0.13
ARHGEF1-216ENST00000598587 SPON1Q9HCB6 807 aa15.84■□□□□ 0.13
ARHGEF1-216ENST00000598587 GNPATO15228 680 aa15.83■□□□□ 0.12
ARHGEF1-216ENST00000598587 MSH5O43196 834 aa15.83■□□□□ 0.12
ARHGEF1-216ENST00000598587 RC3H1Q5TC82 1133 aaKnown RBP15.83■□□□□ 0.12
ARHGEF1-216ENST00000598587 TEX13AQ9BXU3 409 aaPredicted RBP15.83■□□□□ 0.12
ARHGEF1-216ENST00000598587 MTFR1LQ9H019 292 aa15.83■□□□□ 0.12
ARHGEF1-216ENST00000598587 NEUROD2Q15784 382 aa15.82■□□□□ 0.12
ARHGEF1-216ENST00000598587 SLC4A9Q96Q91 983 aa15.82■□□□□ 0.12
ARHGEF1-216ENST00000598587 RTCBQ9Y3I0 505 aaKnown RBP15.82■□□□□ 0.12
ARHGEF1-216ENST00000598587 HEG1Q9ULI3 1381 aa15.82■□□□□ 0.12
ARHGEF1-216ENST00000598587 CCDC184Q52MB2 194 aa15.81■□□□□ 0.12
ARHGEF1-216ENST00000598587 PHF14O94880 888 aa15.8■□□□□ 0.12
ARHGEF1-216ENST00000598587 ZBTB7AO95365 584 aa15.8■□□□□ 0.12
ARHGEF1-216ENST00000598587 STARD3NLO95772 234 aa15.8■□□□□ 0.12
ARHGEF1-216ENST00000598587 ADRA2BP18089 450 aa15.8■□□□□ 0.12
ARHGEF1-216ENST00000598587 CRKLP46109 303 aaKnown RBP15.8■□□□□ 0.12
ARHGEF1-216ENST00000598587 RRP7AQ9Y3A4 280 aaKnown RBP15.8■□□□□ 0.12
ARHGEF1-216ENST00000598587 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.79■□□□□ 0.12
ARHGEF1-216ENST00000598587 CALD1Q05682 793 aaKnown RBP15.79■□□□□ 0.12
ARHGEF1-216ENST00000598587 DNAJC10Q8IXB1 793 aa15.79■□□□□ 0.12
ARHGEF1-216ENST00000598587 ZNF496Q96IT1 587 aaPredicted RBP15.79■□□□□ 0.12
ARHGEF1-216ENST00000598587 CCDC87Q9NVE4 849 aa15.79■□□□□ 0.12
ARHGEF1-216ENST00000598587 BABAM1Q9NWV8 329 aa15.79■□□□□ 0.12
ARHGEF1-216ENST00000598587 PPP1R1BQ9UD71 204 aaPredicted RBP15.79■□□□□ 0.12
ARHGEF1-216ENST00000598587 COL23A1Q86Y22 540 aaPredicted RBP15.78■□□□□ 0.12
ARHGEF1-216ENST00000598587 PDGFDQ9GZP0 370 aaPredicted RBP15.78■□□□□ 0.12
ARHGEF1-216ENST00000598587 APAF1O14727 1248 aa15.77■□□□□ 0.12
ARHGEF1-216ENST00000598587 RPS6KA4O75676 772 aa15.77■□□□□ 0.12
ARHGEF1-216ENST00000598587 CYP19A1P11511 503 aaPredicted RBP15.77■□□□□ 0.12
ARHGEF1-216ENST00000598587 POLD1P28340 1107 aa15.77■□□□□ 0.12
ARHGEF1-216ENST00000598587 TRAPPC3LQ5T215 181 aa15.77■□□□□ 0.12
ARHGEF1-216ENST00000598587 DIEXFQ68CQ4 756 aaKnown RBP15.77■□□□□ 0.12
ARHGEF1-216ENST00000598587 THUMPD2Q9BTF0 503 aaKnown RBP15.77■□□□□ 0.12
ARHGEF1-216ENST00000598587 TSPYL4Q9UJ04 414 aa15.77■□□□□ 0.12
ARHGEF1-216ENST00000598587 SNRPA1P09661 255 aaKnown RBP15.76■□□□□ 0.11
ARHGEF1-216ENST00000598587 NPM2Q86SE8 214 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms