RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 GNAT3A8MTJ3 354 aa29.18■■■□□ 2.26
HOMER3-206ENST00000594439 SLC52A2Q9HAB3 445 aa29.18■■■□□ 2.26
HOMER3-206ENST00000594439 PLEKHF1Q96S99 279 aa29.17■■■□□ 2.26
HOMER3-206ENST00000594439 LOC102724428A0A0B4J2F2 783 aa29.16■■■□□ 2.26
HOMER3-206ENST00000594439 SIK1P57059 783 aa29.16■■■□□ 2.26
HOMER3-206ENST00000594439 QSER1Q2KHR3 1735 aa29.16■■■□□ 2.26
HOMER3-206ENST00000594439 TUBGCP6Q96RT7 1819 aa29.15■■■□□ 2.26
HOMER3-206ENST00000594439 IL17REQ8NFR9 667 aa29.15■■■□□ 2.26
HOMER3-206ENST00000594439 LRP5O75197 1615 aa29.13■■■□□ 2.25
HOMER3-206ENST00000594439 ZNF831Q5JPB2 1677 aa29.13■■■□□ 2.25
HOMER3-206ENST00000594439 PDGFDQ9GZP0 370 aaPredicted RBP29.13■■■□□ 2.25
HOMER3-206ENST00000594439 SIPA1L3O60292 1781 aaPredicted RBP29.13■■■□□ 2.25
HOMER3-206ENST00000594439 PNNQ9H307 717 aaKnown RBP29.11■■■□□ 2.25
HOMER3-206ENST00000594439 DLG5Q8TDM6 1919 aa29.11■■■□□ 2.25
HOMER3-206ENST00000594439 CEMIPQ8WUJ3 1361 aa29.11■■■□□ 2.25
HOMER3-206ENST00000594439 C4BP0C0L5 1744 aa29.11■■■□□ 2.25
HOMER3-206ENST00000594439 ITPK1Q13572 414 aa29.1■■■□□ 2.25
HOMER3-206ENST00000594439 SLC4A9Q96Q91 983 aa29.1■■■□□ 2.25
HOMER3-206ENST00000594439 NEFMP07197 916 aa29.09■■■□□ 2.25
HOMER3-206ENST00000594439 HMGB2P26583 209 aaKnown RBP29.09■■■□□ 2.25
HOMER3-206ENST00000594439 ATP6V1AP38606 617 aa29.09■■■□□ 2.25
HOMER3-206ENST00000594439 RBM42Q9BTD8 480 aaKnown RBP29.09■■■□□ 2.25
HOMER3-206ENST00000594439 LINC00116Q8NCU8 138 aa29.07■■■□□ 2.24
HOMER3-206ENST00000594439 TFCP2L1Q9NZI6 479 aa29.07■■■□□ 2.24
HOMER3-206ENST00000594439 PNPLA7Q6ZV29 1317 aa29.06■■■□□ 2.24
HOMER3-206ENST00000594439 MAPK8IP3Q9UPT6 1336 aa29.06■■■□□ 2.24
HOMER3-206ENST00000594439 ANP32CO43423 234 aa29.06■■■□□ 2.24
HOMER3-206ENST00000594439 HTATSF1O43719 755 aaKnown RBP29.06■■■□□ 2.24
HOMER3-206ENST00000594439 TEFQ10587 303 aa29.06■■■□□ 2.24
HOMER3-206ENST00000594439 WDR43Q15061 677 aaKnown RBP eCLIP29.06■■■□□ 2.24
HOMER3-206ENST00000594439 COL5A3P25940 1745 aaPredicted RBP29.06■■■□□ 2.24
HOMER3-206ENST00000594439 PTCD1O75127 700 aaKnown RBP29.05■■■□□ 2.24
HOMER3-206ENST00000594439 SLC39A6Q13433 755 aa29.05■■■□□ 2.24
HOMER3-206ENST00000594439 NFE2L2Q16236 605 aa29.05■■■□□ 2.24
HOMER3-206ENST00000594439 CICQ96RK0 1608 aaPredicted RBP29.05■■■□□ 2.24
HOMER3-206ENST00000594439 UBR2Q8IWV8 1755 aa29.04■■■□□ 2.24
HOMER3-206ENST00000594439 MCM10Q7L590 875 aa29.04■■■□□ 2.24
HOMER3-206ENST00000594439 RTF1Q92541 710 aaKnown RBP29.04■■■□□ 2.24
HOMER3-206ENST00000594439 KCPQ6ZWJ8 1503 aa29.04■■■□□ 2.24
HOMER3-206ENST00000594439 UBR3Q6ZT12 1888 aa29.04■■■□□ 2.24
HOMER3-206ENST00000594439 TJP1Q07157 1748 aa29.03■■■□□ 2.24
HOMER3-206ENST00000594439 CCDC184Q52MB2 194 aa29.03■■■□□ 2.24
HOMER3-206ENST00000594439 ADAMTS8Q9UP79 889 aa29.03■■■□□ 2.24
HOMER3-206ENST00000594439 DCTN1Q14203 1278 aa29.02■■■□□ 2.24
HOMER3-206ENST00000594439 ZBTB7AO95365 584 aa29.01■■■□□ 2.23
HOMER3-206ENST00000594439 AK7Q96M32 723 aa29■■■□□ 2.23
HOMER3-206ENST00000594439 SPON1Q9HCB6 807 aa29■■■□□ 2.23
HOMER3-206ENST00000594439 CCDC146Q8IYE0 955 aa28.99■■■□□ 2.23
HOMER3-206ENST00000594439 AMIGO3Q86WK7 504 aa28.98■■■□□ 2.23
HOMER3-206ENST00000594439 COL23A1Q86Y22 540 aaPredicted RBP28.98■■■□□ 2.23
HOMER3-206ENST00000594439 RUNDC1Q96C34 613 aa28.97■■■□□ 2.23
HOMER3-206ENST00000594439 MTFR1LQ9H019 292 aa28.97■■■□□ 2.23
HOMER3-206ENST00000594439 MYH14Q7Z406 1995 aaKnown RBP28.97■■■□□ 2.23
HOMER3-206ENST00000594439 ZNF790Q6PG37 636 aa28.96■■■□□ 2.23
HOMER3-206ENST00000594439 TMPOP42166 694 aaKnown RBP28.95■■■□□ 2.22
HOMER3-206ENST00000594439 RC3H1Q5TC82 1133 aaKnown RBP28.95■■■□□ 2.22
HOMER3-206ENST00000594439 TTC5Q8N0Z6 440 aa28.95■■■□□ 2.22
HOMER3-206ENST00000594439 SLC16A10Q8TF71 515 aa28.95■■■□□ 2.22
HOMER3-206ENST00000594439 ATF5Q9Y2D1 282 aaPredicted RBP28.95■■■□□ 2.22
HOMER3-206ENST00000594439 CNTNAP4Q9C0A0 1308 aa28.94■■■□□ 2.22
HOMER3-206ENST00000594439 COL24A1Q17RW2 1714 aa28.94■■■□□ 2.22
HOMER3-206ENST00000594439 BTBD11A6QL63 1104 aa28.94■■■□□ 2.22
HOMER3-206ENST00000594439 DNAJC10Q8IXB1 793 aa28.94■■■□□ 2.22
HOMER3-206ENST00000594439 FLAD1Q8NFF5 587 aa28.94■■■□□ 2.22
HOMER3-206ENST00000594439 GNPATO15228 680 aa28.93■■■□□ 2.22
HOMER3-206ENST00000594439 RIPK4P57078 832 aa28.93■■■□□ 2.22
HOMER3-206ENST00000594439 SMIM5Q71RC9 77 aa28.93■■■□□ 2.22
HOMER3-206ENST00000594439 KCNQ3O43525 872 aa28.92■■■□□ 2.22
HOMER3-206ENST00000594439 SSFA2P28290 1259 aa28.92■■■□□ 2.22
HOMER3-206ENST00000594439 PTGER2P43116 358 aa28.92■■■□□ 2.22
HOMER3-206ENST00000594439 VSIG10Q8N0Z9 540 aa28.92■■■□□ 2.22
HOMER3-206ENST00000594439 ZNF496Q96IT1 587 aaPredicted RBP28.92■■■□□ 2.22
HOMER3-206ENST00000594439 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.91■■■□□ 2.22
HOMER3-206ENST00000594439 SGIP1Q9BQI5 828 aa28.91■■■□□ 2.22
HOMER3-206ENST00000594439 THUMPD2Q9BTF0 503 aaKnown RBP28.91■■■□□ 2.22
HOMER3-206ENST00000594439 MSH5O43196 834 aa28.9■■■□□ 2.22
HOMER3-206ENST00000594439 PHF14O94880 888 aa28.9■■■□□ 2.22
HOMER3-206ENST00000594439 TAF7Q15545 349 aaPredicted RBP28.9■■■□□ 2.22
HOMER3-206ENST00000594439 SRCAPQ6ZRS2 3230 aa28.9■■■□□ 2.22
HOMER3-206ENST00000594439 MRS2Q9HD23 443 aa28.9■■■□□ 2.22
HOMER3-206ENST00000594439 RRP7AQ9Y3A4 280 aaKnown RBP28.9■■■□□ 2.22
HOMER3-206ENST00000594439 HEG1Q9ULI3 1381 aa28.89■■■□□ 2.22
HOMER3-206ENST00000594439 CRKLP46109 303 aaKnown RBP28.89■■■□□ 2.22
HOMER3-206ENST00000594439 CYP19A1P11511 503 aaPredicted RBP28.88■■■□□ 2.21
HOMER3-206ENST00000594439 PNISRQ8TF01 805 aaKnown RBP28.88■■■□□ 2.21
HOMER3-206ENST00000594439 KDM3BQ7LBC6 1761 aa28.88■■■□□ 2.21
HOMER3-206ENST00000594439 RPS6KA4O75676 772 aa28.87■■■□□ 2.21
HOMER3-206ENST00000594439 INTS5Q6P9B9 1019 aaKnown RBP28.87■■■□□ 2.21
HOMER3-206ENST00000594439 FMNL2Q96PY5 1086 aa28.87■■■□□ 2.21
HOMER3-206ENST00000594439 RTCBQ9Y3I0 505 aaKnown RBP28.87■■■□□ 2.21
HOMER3-206ENST00000594439 LMOD3Q0VAK6 560 aa28.86■■■□□ 2.21
HOMER3-206ENST00000594439 NEUROD2Q15784 382 aa28.85■■■□□ 2.21
HOMER3-206ENST00000594439 CCDC87Q9NVE4 849 aa28.84■■■□□ 2.21
HOMER3-206ENST00000594439 MIS18AQ9NYP9 233 aa28.84■■■□□ 2.21
HOMER3-206ENST00000594439 TRIM35Q9UPQ4 493 aa28.83■■■□□ 2.21
HOMER3-206ENST00000594439 ADRA2BP18089 450 aa28.82■■■□□ 2.2
HOMER3-206ENST00000594439 TRAPPC3LQ5T215 181 aa28.82■■■□□ 2.2
HOMER3-206ENST00000594439 PPP1R1BQ9UD71 204 aaPredicted RBP28.82■■■□□ 2.2
HOMER3-206ENST00000594439 C4AP0C0L4 1744 aa28.82■■■□□ 2.2
HOMER3-206ENST00000594439 APAF1O14727 1248 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms