RNA–Protein interactions for RNA: ENST00000593287.5

C19orf48-203, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 5

Gene C19orf48, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-203ENST00000593287 SF3B2Q13435 895 aaKnown RBP17.97■□□□□ 0.47
C19orf48-203ENST00000593287 NFATC2IPQ8NCF5 419 aa17.97■□□□□ 0.47
C19orf48-203ENST00000593287 NHSQ6T4R5 1651 aa17.96■□□□□ 0.47
C19orf48-203ENST00000593287 VIRMAQ69YN4 1812 aaKnown RBP17.96■□□□□ 0.47
C19orf48-203ENST00000593287 DOT1LQ8TEK3 1739 aa17.96■□□□□ 0.47
C19orf48-203ENST00000593287 KAT6BQ8WYB5 2073 aa17.96■□□□□ 0.47
C19orf48-203ENST00000593287 ZNF521Q96K83 1311 aa17.96■□□□□ 0.46
C19orf48-203ENST00000593287 SALL2Q9Y467 1007 aaPredicted RBP17.95■□□□□ 0.46
C19orf48-203ENST00000593287 SOS1Q07889 1333 aaPredicted RBP17.95■□□□□ 0.46
C19orf48-203ENST00000593287 DCTN1Q14203 1278 aa17.94■□□□□ 0.46
C19orf48-203ENST00000593287 TSPYL4Q9UJ04 414 aa17.94■□□□□ 0.46
C19orf48-203ENST00000593287 CHL1O00533 1208 aa17.93■□□□□ 0.46
C19orf48-203ENST00000593287 PIGBQ92521 554 aa17.93■□□□□ 0.46
C19orf48-203ENST00000593287 ACSBG1Q96GR2 724 aa17.93■□□□□ 0.46
C19orf48-203ENST00000593287 ITGB4P16144 1822 aa17.93■□□□□ 0.46
C19orf48-203ENST00000593287 SBF2Q86WG5 1849 aa17.93■□□□□ 0.46
C19orf48-203ENST00000593287 ZNF790Q6PG37 636 aa17.92■□□□□ 0.46
C19orf48-203ENST00000593287 TOGARAM1Q9Y4F4 1720 aa17.92■□□□□ 0.46
C19orf48-203ENST00000593287 SIPA1L3O60292 1781 aaPredicted RBP17.91■□□□□ 0.46
C19orf48-203ENST00000593287 ZNF853P0CG23 659 aa17.91■□□□□ 0.46
C19orf48-203ENST00000593287 VSIG10Q8N0Z9 540 aa17.91■□□□□ 0.46
C19orf48-203ENST00000593287 FMNL2Q96PY5 1086 aa17.91■□□□□ 0.46
C19orf48-203ENST00000593287 TEX13AQ9BXU3 409 aaPredicted RBP17.91■□□□□ 0.46
C19orf48-203ENST00000593287 LAS1LQ9Y4W2 734 aaKnown RBP17.91■□□□□ 0.46
C19orf48-203ENST00000593287 PLSCR1O15162 318 aa17.9■□□□□ 0.46
C19orf48-203ENST00000593287 TRIM37O94972 964 aa17.9■□□□□ 0.46
C19orf48-203ENST00000593287 HOXB7P09629 217 aa17.9■□□□□ 0.46
C19orf48-203ENST00000593287 FAM182BQ5T319 152 aa17.9■□□□□ 0.46
C19orf48-203ENST00000593287 THUMPD2Q9BTF0 503 aaKnown RBP17.9■□□□□ 0.46
C19orf48-203ENST00000593287 CT47B1P0C2W7 299 aaPredicted RBP17.89■□□□□ 0.45
C19orf48-203ENST00000593287 KCNQ2O43526 872 aa17.88■□□□□ 0.45
C19orf48-203ENST00000593287 BAG6P46379 1132 aa17.88■□□□□ 0.45
C19orf48-203ENST00000593287 SLFN5Q08AF3 891 aa17.88■□□□□ 0.45
C19orf48-203ENST00000593287 SLC27A3Q5K4L6 730 aa17.88■□□□□ 0.45
C19orf48-203ENST00000593287 ZNF428Q96B54 188 aa17.87■□□□□ 0.45
C19orf48-203ENST00000593287 YTHDC1Q96MU7 727 aaKnown RBP17.87■□□□□ 0.45
C19orf48-203ENST00000593287 ATG3Q9NT62 314 aa17.87■□□□□ 0.45
C19orf48-203ENST00000593287 PALLDQ8WX93 1383 aa17.87■□□□□ 0.45
C19orf48-203ENST00000593287 BTAF1O14981 1849 aa17.86■□□□□ 0.45
C19orf48-203ENST00000593287 APBA3O96018 575 aa17.86■□□□□ 0.45
C19orf48-203ENST00000593287 SNRPA1P09661 255 aaKnown RBP17.86■□□□□ 0.45
C19orf48-203ENST00000593287 MBIPQ9NS73 344 aa17.86■□□□□ 0.45
C19orf48-203ENST00000593287 PAPPAQ13219 1627 aa17.86■□□□□ 0.45
C19orf48-203ENST00000593287 RGPD3A6NKT7 1758 aaPredicted RBP17.86■□□□□ 0.45
C19orf48-203ENST00000593287 KDM3BQ7LBC6 1761 aa17.86■□□□□ 0.45
C19orf48-203ENST00000593287 RGPD4Q7Z3J3 1758 aa17.86■□□□□ 0.45
C19orf48-203ENST00000593287 ZNF831Q5JPB2 1677 aa17.85■□□□□ 0.45
C19orf48-203ENST00000593287 ASAP1Q9ULH1 1129 aa17.85■□□□□ 0.45
C19orf48-203ENST00000593287 FANCIQ9NVI1 1328 aa17.84■□□□□ 0.45
C19orf48-203ENST00000593287 STARD3NLO95772 234 aa17.84■□□□□ 0.45
C19orf48-203ENST00000593287 EIF4A1P60842 406 aaKnown RBP17.84■□□□□ 0.45
C19orf48-203ENST00000593287 HEG1Q9ULI3 1381 aa17.83■□□□□ 0.45
C19orf48-203ENST00000593287 LOC102724428A0A0B4J2F2 783 aa17.83■□□□□ 0.44
C19orf48-203ENST00000593287 SIK1P57059 783 aa17.83■□□□□ 0.44
C19orf48-203ENST00000593287 TRMT2AQ8IZ69 625 aaKnown RBP17.83■□□□□ 0.44
C19orf48-203ENST00000593287 RBM42Q9BTD8 480 aaKnown RBP17.83■□□□□ 0.44
C19orf48-203ENST00000593287 UBR2Q8IWV8 1755 aa17.83■□□□□ 0.44
C19orf48-203ENST00000593287 SLC39A6Q13433 755 aa17.82■□□□□ 0.44
C19orf48-203ENST00000593287 ERBB4Q15303 1308 aa17.81■□□□□ 0.44
C19orf48-203ENST00000593287 SENP3-EIF4A1A0A087X0R7 540 aa17.81■□□□□ 0.44
C19orf48-203ENST00000593287 PTCD1O75127 700 aaKnown RBP17.81■□□□□ 0.44
C19orf48-203ENST00000593287 ZNF496Q96IT1 587 aaPredicted RBP17.81■□□□□ 0.44
C19orf48-203ENST00000593287 MIS18AQ9NYP9 233 aa17.81■□□□□ 0.44
C19orf48-203ENST00000593287 CCNL1Q9UK58 526 aaPredicted RBP17.81■□□□□ 0.44
C19orf48-203ENST00000593287 TNS1Q9HBL0 1735 aaKnown RBP17.81■□□□□ 0.44
C19orf48-203ENST00000593287 CICQ96RK0 1608 aaPredicted RBP17.8■□□□□ 0.44
C19orf48-203ENST00000593287 GIGYF1O75420 1035 aaPredicted RBP17.8■□□□□ 0.44
C19orf48-203ENST00000593287 ATP6V1AP38606 617 aa17.8■□□□□ 0.44
C19orf48-203ENST00000593287 DUSP27Q5VZP5 1158 aa17.8■□□□□ 0.44
C19orf48-203ENST00000593287 TSR2Q969E8 191 aaKnown RBP17.8■□□□□ 0.44
C19orf48-203ENST00000593287 KCPQ6ZWJ8 1503 aa17.8■□□□□ 0.44
C19orf48-203ENST00000593287 LY75O60449 1722 aa17.79■□□□□ 0.44
C19orf48-203ENST00000593287 TWISTNBQ3B726 338 aaPredicted RBP17.79■□□□□ 0.44
C19orf48-203ENST00000593287 NPM2Q86SE8 214 aaKnown RBP17.79■□□□□ 0.44
C19orf48-203ENST00000593287 CCDC30Q5VVM6 783 aa17.78■□□□□ 0.44
C19orf48-203ENST00000593287 EP400Q96L91 3159 aa17.77■□□□□ 0.44
C19orf48-203ENST00000593287 TXNRD1Q16881 649 aa17.77■□□□□ 0.44
C19orf48-203ENST00000593287 CDCA7LQ96GN5 454 aa17.77■□□□□ 0.44
C19orf48-203ENST00000593287 STK31Q9BXU1 1019 aa17.77■□□□□ 0.44
C19orf48-203ENST00000593287 EXOSC9Q06265 439 aaKnown RBP17.76■□□□□ 0.43
C19orf48-203ENST00000593287 RC3H1Q5TC82 1133 aaKnown RBP17.76■□□□□ 0.43
C19orf48-203ENST00000593287 UPF1Q92900 1129 aaKnown RBP eCLIP17.76■□□□□ 0.43not detected■■■■■ 40.1
C19orf48-203ENST00000593287 SPINK5Q9NQ38 1064 aaPredicted RBP17.76■□□□□ 0.43
C19orf48-203ENST00000593287 KCNQ3O43525 872 aa17.75■□□□□ 0.43
C19orf48-203ENST00000593287 HDGFL1Q5TGJ6 251 aa17.75■□□□□ 0.43
C19orf48-203ENST00000593287 CNTNAP4Q9C0A0 1308 aa17.74■□□□□ 0.43
C19orf48-203ENST00000593287 ALDH1L2Q3SY69 923 aa17.74■□□□□ 0.43
C19orf48-203ENST00000593287 PTF1AQ7RTS3 328 aa17.74■□□□□ 0.43
C19orf48-203ENST00000593287 CAMKK2Q96RR4 588 aa17.74■□□□□ 0.43
C19orf48-203ENST00000593287 DBF4Q9UBU7 674 aaPredicted RBP17.74■□□□□ 0.43
C19orf48-203ENST00000593287 C5P01031 1676 aa17.74■□□□□ 0.43
C19orf48-203ENST00000593287 LAMB4A4D0S4 1761 aa17.74■□□□□ 0.43
C19orf48-203ENST00000593287 NBPF14Q5TI25 921 aa17.73■□□□□ 0.43
C19orf48-203ENST00000593287 C8orf58Q8NAV2 365 aa17.73■□□□□ 0.43
C19orf48-203ENST00000593287 VAMP4O75379 141 aa17.72■□□□□ 0.43
C19orf48-203ENST00000593287 CENPBP07199 599 aaPredicted RBP17.72■□□□□ 0.43
C19orf48-203ENST00000593287 FLAD1Q8NFF5 587 aa17.72■□□□□ 0.43
C19orf48-203ENST00000593287 CCDC87Q9NVE4 849 aa17.72■□□□□ 0.43
C19orf48-203ENST00000593287 HYPKQ9NX55 129 aa17.72■□□□□ 0.43
C19orf48-203ENST00000593287 CACNA1FO60840 1977 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms