RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 KLHL34Q8N239 644 aa17.15■□□□□ 0.34
CIRBP-242ENST00000593093 FBXW7Q969H0 707 aa17.15■□□□□ 0.34
CIRBP-242ENST00000593093 C16orf45Q96MC5 204 aaPredicted RBP17.15■□□□□ 0.34
CIRBP-242ENST00000593093 SRCIN1Q9C0H9 1055 aa17.15■□□□□ 0.34
CIRBP-242ENST00000593093 RTF1Q92541 710 aaKnown RBP17.14■□□□□ 0.34
CIRBP-242ENST00000593093 BCL2L12Q9HB09 334 aa17.14■□□□□ 0.34
CIRBP-242ENST00000593093 MSH6P52701 1360 aa17.14■□□□□ 0.33
CIRBP-242ENST00000593093 PPRC1Q5VV67 1664 aaKnown RBP17.14■□□□□ 0.33
CIRBP-242ENST00000593093 NSD2O96028 1365 aa17.14■□□□□ 0.33
CIRBP-242ENST00000593093 MX1P20591 662 aa17.14■□□□□ 0.33
CIRBP-242ENST00000593093 CKAP2LQ8IYA6 745 aa17.14■□□□□ 0.33
CIRBP-242ENST00000593093 LRRCC1Q9C099 1032 aa17.14■□□□□ 0.33
CIRBP-242ENST00000593093 TSPYL4Q9UJ04 414 aa17.14■□□□□ 0.33
CIRBP-242ENST00000593093 EFCAB6Q5THR3 1501 aa17.13■□□□□ 0.33
CIRBP-242ENST00000593093 STK31Q9BXU1 1019 aa17.13■□□□□ 0.33
CIRBP-242ENST00000593093 SPG7Q9UQ90 795 aa17.13■□□□□ 0.33
CIRBP-242ENST00000593093 UNC5CLQ8IV45 518 aa17.13■□□□□ 0.33
CIRBP-242ENST00000593093 CCDC83Q8IWF9 413 aa17.13■□□□□ 0.33
CIRBP-242ENST00000593093 PIBF1Q8WXW3 757 aa17.13■□□□□ 0.33
CIRBP-242ENST00000593093 SBNO2Q9Y2G9 1366 aa17.13■□□□□ 0.33
CIRBP-242ENST00000593093 RIOK3O14730 519 aaKnown RBP17.13■□□□□ 0.33
CIRBP-242ENST00000593093 CCDC183Q5T5S1 534 aa17.13■□□□□ 0.33
CIRBP-242ENST00000593093 FAM173BQ6P4H8 233 aa17.13■□□□□ 0.33
CIRBP-242ENST00000593093 CWC27Q6UX04 472 aaKnown RBP17.13■□□□□ 0.33
CIRBP-242ENST00000593093 CEBPAP49715 358 aaPredicted RBP17.12■□□□□ 0.33
CIRBP-242ENST00000593093 PYCARDQ9ULZ3 195 aa17.12■□□□□ 0.33
CIRBP-242ENST00000593093 MCM2P49736 904 aa17.12■□□□□ 0.33
CIRBP-242ENST00000593093 ZNF710Q8N1W2 664 aa17.12■□□□□ 0.33
CIRBP-242ENST00000593093 SLC52A1Q9NWF4 448 aa17.12■□□□□ 0.33
CIRBP-242ENST00000593093 GNAI2P04899 355 aa17.11■□□□□ 0.33
CIRBP-242ENST00000593093 DNM1Q05193 864 aaKnown RBP17.11■□□□□ 0.33
CIRBP-242ENST00000593093 TXNDC2Q86VQ3 553 aa17.11■□□□□ 0.33
CIRBP-242ENST00000593093 SURF6O75683 361 aaKnown RBP17.11■□□□□ 0.33
CIRBP-242ENST00000593093 FOSBP53539 338 aa17.11■□□□□ 0.33
CIRBP-242ENST00000593093 FOXO3O43524 673 aa17.1■□□□□ 0.33
CIRBP-242ENST00000593093 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.1■□□□□ 0.331e-9■□□□□ 8.6
CIRBP-242ENST00000593093 V9GYY5 206 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-242ENST00000593093 MLH3Q9UHC1 1453 aa17.1■□□□□ 0.33
CIRBP-242ENST00000593093 ABCA6Q8N139 1617 aa17.1■□□□□ 0.33
CIRBP-242ENST00000593093 MROH1Q8NDA8 1641 aa17.1■□□□□ 0.33
CIRBP-242ENST00000593093 DMTNQ08495 405 aa17.1■□□□□ 0.33
CIRBP-242ENST00000593093 PRIMPOLQ96LW4 560 aa17.1■□□□□ 0.33
CIRBP-242ENST00000593093 DIAPH3Q9NSV4 1193 aa17.1■□□□□ 0.33
CIRBP-242ENST00000593093 PTGS1P23219 599 aa17.09■□□□□ 0.33
CIRBP-242ENST00000593093 TRIM5Q9C035 493 aa17.09■□□□□ 0.33
CIRBP-242ENST00000593093 HECW2Q9P2P5 1572 aa17.09■□□□□ 0.33
CIRBP-242ENST00000593093 CHMLP26374 656 aa17.09■□□□□ 0.33
CIRBP-242ENST00000593093 PNMA6EA0A0J9YXQ4 647 aa17.09■□□□□ 0.33
CIRBP-242ENST00000593093 NECAB1Q8N987 351 aa17.09■□□□□ 0.33
CIRBP-242ENST00000593093 TCEANC2Q96MN5 208 aa17.09■□□□□ 0.33
CIRBP-242ENST00000593093 GOLGA6L6A8MZA4 724 aa17.08■□□□□ 0.33
CIRBP-242ENST00000593093 KDM4AO75164 1064 aa17.08■□□□□ 0.33
CIRBP-242ENST00000593093 FAM184AQ8NB25 1140 aa17.08■□□□□ 0.33
CIRBP-242ENST00000593093 LTV1Q96GA3 475 aaPredicted RBP17.08■□□□□ 0.33
CIRBP-242ENST00000593093 TFIP11Q9UBB9 837 aaKnown RBP17.08■□□□□ 0.33
CIRBP-242ENST00000593093 KIF1BO60333 1816 aa17.08■□□□□ 0.33
CIRBP-242ENST00000593093 STX6O43752 255 aa17.08■□□□□ 0.32
CIRBP-242ENST00000593093 EIF2S2P20042 333 aaKnown RBP17.08■□□□□ 0.32
CIRBP-242ENST00000593093 NAA30Q147X3 362 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-242ENST00000593093 CERS3Q8IU89 383 aa17.08■□□□□ 0.32
CIRBP-242ENST00000593093 LRRFIP2Q9Y608 721 aaKnown RBP17.08■□□□□ 0.32
CIRBP-242ENST00000593093 ZSCAN20P17040 1043 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-242ENST00000593093 CASTP20810 708 aaKnown RBP17.08■□□□□ 0.32
CIRBP-242ENST00000593093 SHPRHQ149N8 1683 aa17.07■□□□□ 0.32
CIRBP-242ENST00000593093 SYT1P21579 422 aa17.07■□□□□ 0.32
CIRBP-242ENST00000593093 IL13P35225 146 aa17.07■□□□□ 0.32
CIRBP-242ENST00000593093 CEBPZQ03701 1054 aaKnown RBP17.07■□□□□ 0.32
CIRBP-242ENST00000593093 TMEM51Q9NW97 253 aa17.07■□□□□ 0.32
CIRBP-242ENST00000593093 HAP1P54257 671 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-242ENST00000593093 LRMPQ12912 555 aa17.07■□□□□ 0.32
CIRBP-242ENST00000593093 FRMPD1Q5SYB0 1578 aa17.07■□□□□ 0.32
CIRBP-242ENST00000593093 LUZP1Q86V48 1076 aa17.07■□□□□ 0.32
CIRBP-242ENST00000593093 ABCC3O15438 1527 aa17.06■□□□□ 0.32
CIRBP-242ENST00000593093 RTL1A6NKG5 1358 aa17.06■□□□□ 0.32
CIRBP-242ENST00000593093 RPGRIP1LQ68CZ1 1315 aa17.06■□□□□ 0.32
CIRBP-242ENST00000593093 STK3Q13188 491 aa17.06■□□□□ 0.32
CIRBP-242ENST00000593093 NCBP3Q53F19 620 aaKnown RBP17.06■□□□□ 0.32
CIRBP-242ENST00000593093 CCDC186Q7Z3E2 898 aa17.06■□□□□ 0.32
CIRBP-242ENST00000593093 MAP3K4Q9Y6R4 1608 aa17.06■□□□□ 0.32
CIRBP-242ENST00000593093 ZSCAN22P10073 491 aaPredicted RBP17.06■□□□□ 0.32
CIRBP-242ENST00000593093 MROH2AA6NES4 1674 aa17.06■□□□□ 0.32
CIRBP-242ENST00000593093 AK2P54819 239 aa17.05■□□□□ 0.32
CIRBP-242ENST00000593093 TPD52L1Q16890 204 aaPredicted RBP17.05■□□□□ 0.32
CIRBP-242ENST00000593093 IL25Q9H293 177 aa17.05■□□□□ 0.32
CIRBP-242ENST00000593093 TRERF1Q96PN7 1200 aa17.05■□□□□ 0.32
CIRBP-242ENST00000593093 ERICH4A6NGS2 130 aa17.04■□□□□ 0.32
CIRBP-242ENST00000593093 JAKMIP1Q96N16 626 aaKnown RBP17.04■□□□□ 0.32
CIRBP-242ENST00000593093 DEPDC5O75140 1603 aa17.04■□□□□ 0.32
CIRBP-242ENST00000593093 PPFIA3O75145 1194 aa17.04■□□□□ 0.32
CIRBP-242ENST00000593093 GJB2P29033 226 aa17.04■□□□□ 0.32
CIRBP-242ENST00000593093 UBE2HP62256 183 aa17.04■□□□□ 0.32
CIRBP-242ENST00000593093 ZNF853P0CG23 659 aa17.04■□□□□ 0.32
CIRBP-242ENST00000593093 ATP6V1DQ9Y5K8 247 aa17.04■□□□□ 0.32
CIRBP-242ENST00000593093 NEO1Q92859 1461 aa17.03■□□□□ 0.32
CIRBP-242ENST00000593093 CCDC192P0DO97 292 aa17.03■□□□□ 0.32
CIRBP-242ENST00000593093 HSP90AB2PQ58FF8 381 aa17.03■□□□□ 0.32
CIRBP-242ENST00000593093 BICD2Q8TD16 824 aa17.03■□□□□ 0.32
CIRBP-242ENST00000593093 SLC26A8Q96RN1 970 aa17.03■□□□□ 0.32
CIRBP-242ENST00000593093 BRPF1P55201 1214 aaPredicted RBP17.03■□□□□ 0.32
CIRBP-242ENST00000593093 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms