RNA–Protein interactions for RNA: ENST00000592763.5

ILF3-222, Transcript of interleukin enhancer binding factor 3, human

TSL 5 BASIC

Gene ILF3, Length 3,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-222	ENST00000592763	FAM177B	A6PVY3	158 aa		13.45	□□□□□ -0.26
ILF3-222	ENST00000592763	HTATSF1	O43719	755 aa	Known RBP	13.45	□□□□□ -0.26
ILF3-222	ENST00000592763	MEX3C	Q5U5Q3	659 aa	Known RBP	13.45	□□□□□ -0.26
ILF3-222	ENST00000592763	ZBTB7B	O15156	539 aa	Predicted RBP	13.44	□□□□□ -0.26
ILF3-222	ENST00000592763	LARP1	Q6PKG0	1096 aa	Known RBP	13.44	□□□□□ -0.26
ILF3-222	ENST00000592763	LRRFIP2	Q9Y608	721 aa	Known RBP	13.44	□□□□□ -0.26
ILF3-222	ENST00000592763	PRAMEF22	A3QJZ6	481 aa		13.44	□□□□□ -0.26
ILF3-222	ENST00000592763	ARHGAP45	Q92619	1136 aa		13.44	□□□□□ -0.26
ILF3-222	ENST00000592763	DBF4	Q9UBU7	674 aa	Predicted RBP	13.44	□□□□□ -0.26
ILF3-222	ENST00000592763	NPHP1	O15259	732 aa		13.44	□□□□□ -0.26
ILF3-222	ENST00000592763	NRXN3	Q9Y4C0	1643 aa		13.44	□□□□□ -0.26
ILF3-222	ENST00000592763	SRGAP3	O43295	1099 aa		13.43	□□□□□ -0.26
ILF3-222	ENST00000592763	SIL1	Q9H173	461 aa		13.43	□□□□□ -0.26
ILF3-222	ENST00000592763	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.43	□□□□□ -0.26
ILF3-222	ENST00000592763	NCBP3	Q53F19	620 aa	Known RBP	13.43	□□□□□ -0.26
ILF3-222	ENST00000592763	NGLY1	Q96IV0	654 aa		13.43	□□□□□ -0.26
ILF3-222	ENST00000592763	HSP90AB1	P08238	724 aa	Known RBP	13.43	□□□□□ -0.26
ILF3-222	ENST00000592763	MAP3K2	Q9Y2U5	619 aa		13.43	□□□□□ -0.26
ILF3-222	ENST00000592763	PTPRC	P08575	1304 aa		13.42	□□□□□ -0.26
ILF3-222	ENST00000592763	SPATA31A3	Q5VYP0	1347 aa		13.42	□□□□□ -0.26
ILF3-222	ENST00000592763	KDM2B	Q8NHM5	1336 aa		13.42	□□□□□ -0.26
ILF3-222	ENST00000592763	DNAAF4	Q8WXU2	420 aa		13.42	□□□□□ -0.26
ILF3-222	ENST00000592763	GCC1	Q96CN9	775 aa		13.42	□□□□□ -0.26
ILF3-222	ENST00000592763	ATP5J2-PTCD1	G3V325	749 aa		13.42	□□□□□ -0.26
ILF3-222	ENST00000592763	IL2RB	P14784	551 aa		13.42	□□□□□ -0.26
ILF3-222	ENST00000592763	TSHZ3	Q63HK5	1081 aa		13.42	□□□□□ -0.26
ILF3-222	ENST00000592763	USP19	O94966	1318 aa		13.42	□□□□□ -0.26
ILF3-222	ENST00000592763	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.41	□□□□□ -0.26
ILF3-222	ENST00000592763	TMOD3	Q9NYL9	352 aa		13.41	□□□□□ -0.26
ILF3-222	ENST00000592763	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.41	□□□□□ -0.26
ILF3-222	ENST00000592763	FOXD4L1	Q9NU39	408 aa		13.41	□□□□□ -0.26
ILF3-222	ENST00000592763	TOM1	O60784	492 aa		13.41	□□□□□ -0.26
ILF3-222	ENST00000592763	EIF4A1	P60842	406 aa	Known RBP	13.4	□□□□□ -0.26
ILF3-222	ENST00000592763	CWF19L2	Q2TBE0	894 aa	Known RBP	13.4	□□□□□ -0.26
ILF3-222	ENST00000592763	ZNF790	Q6PG37	636 aa		13.4	□□□□□ -0.26
ILF3-222	ENST00000592763	ACSBG1	Q96GR2	724 aa		13.4	□□□□□ -0.26
ILF3-222	ENST00000592763	C8orf37	Q96NL8	207 aa		13.4	□□□□□ -0.26
ILF3-222	ENST00000592763	EXOC5	O00471	708 aa		13.4	□□□□□ -0.26
ILF3-222	ENST00000592763	COPS6	Q7L5N1	327 aa		13.4	□□□□□ -0.26
ILF3-222	ENST00000592763	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.4	□□□□□ -0.26
ILF3-222	ENST00000592763	FMNL2	Q96PY5	1086 aa		13.4	□□□□□ -0.26
ILF3-222	ENST00000592763	MYD88	Q99836	296 aa		13.4	□□□□□ -0.26
ILF3-222	ENST00000592763	ZNF496	Q96IT1	587 aa	Predicted RBP	13.4	□□□□□ -0.26
ILF3-222	ENST00000592763	ZBTB3	Q9H5J0	574 aa		13.4	□□□□□ -0.26
ILF3-222	ENST00000592763	COL3A1	P02461	1466 aa	Predicted RBP	13.4	□□□□□ -0.26
ILF3-222	ENST00000592763	ANP32E	Q9BTT0	268 aa		13.39	□□□□□ -0.27
ILF3-222	ENST00000592763	MAP4K4	O95819	1239 aa	Predicted RBP	13.39	□□□□□ -0.27
ILF3-222	ENST00000592763	TAF7L	Q5H9L4	462 aa		13.39	□□□□□ -0.27
ILF3-222	ENST00000592763	MAP2	P11137	1827 aa	Known RBP	13.39	□□□□□ -0.27
ILF3-222	ENST00000592763	XAGE3	Q8WTP9	111 aa		13.39	□□□□□ -0.27
ILF3-222	ENST00000592763	MSH5	O43196	834 aa		13.39	□□□□□ -0.27
ILF3-222	ENST00000592763	DCAF5	Q96JK2	942 aa		13.39	□□□□□ -0.27
ILF3-222	ENST00000592763	PHKG2	P15735	406 aa		13.38	□□□□□ -0.27
ILF3-222	ENST00000592763	IQSEC2	Q5JU85	1478 aa		13.38	□□□□□ -0.27
ILF3-222	ENST00000592763	HDAC1	Q13547	482 aa	Predicted RBP	13.38	□□□□□ -0.27
ILF3-222	ENST00000592763	KCNJ4	P48050	445 aa		13.38	□□□□□ -0.27
ILF3-222	ENST00000592763	NOL8	Q76FK4	1167 aa	Known RBP	13.38	□□□□□ -0.27
ILF3-222	ENST00000592763	SNRPA1	P09661	255 aa	Known RBP	13.37	□□□□□ -0.27
ILF3-222	ENST00000592763	PROSER3	Q2NL68	480 aa		13.37	□□□□□ -0.27
ILF3-222	ENST00000592763	NUTM1	Q86Y26	1132 aa		13.37	□□□□□ -0.27
ILF3-222	ENST00000592763	SLC52A2	Q9HAB3	445 aa		13.37	□□□□□ -0.27
ILF3-222	ENST00000592763	SEC24B	O95487	1268 aa		13.37	□□□□□ -0.27
ILF3-222	ENST00000592763	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.37	□□□□□ -0.27
ILF3-222	ENST00000592763	HDAC5	Q9UQL6	1122 aa		13.37	□□□□□ -0.27
ILF3-222	ENST00000592763	USP16	Q9Y5T5	823 aa		13.37	□□□□□ -0.27
ILF3-222	ENST00000592763	LRRCC1	Q9C099	1032 aa		13.36	□□□□□ -0.27
ILF3-222	ENST00000592763	PPP1R42	Q7Z4L9	355 aa		13.36	□□□□□ -0.27
ILF3-222	ENST00000592763	C22orf23	Q9BZE7	217 aa		13.36	□□□□□ -0.27
ILF3-222	ENST00000592763	IFIT2	P09913	472 aa	Known RBP	13.36	□□□□□ -0.27
ILF3-222	ENST00000592763	HYPK	Q9NX55	129 aa		13.36	□□□□□ -0.27
ILF3-222	ENST00000592763	CYP27B1	O15528	508 aa		13.35	□□□□□ -0.27
ILF3-222	ENST00000592763	GIGYF1	O75420	1035 aa	Predicted RBP	13.35	□□□□□ -0.27
ILF3-222	ENST00000592763	INTS3	Q68E01	1043 aa	Known RBP	13.35	□□□□□ -0.27
ILF3-222	ENST00000592763	CEP85	Q6P2H3	762 aa		13.35	□□□□□ -0.27
ILF3-222	ENST00000592763	HSCB	Q8IWL3	235 aa		13.35	□□□□□ -0.27
ILF3-222	ENST00000592763	RTL1	A6NKG5	1358 aa		13.35	□□□□□ -0.27
ILF3-222	ENST00000592763	C8orf34	Q49A92	452 aa		13.35	□□□□□ -0.27
ILF3-222	ENST00000592763	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.35	□□□□□ -0.27
ILF3-222	ENST00000592763	GTF2E1	P29083	439 aa	Predicted RBP	13.35	□□□□□ -0.27
ILF3-222	ENST00000592763	ANKRD13D	Q6ZTN6	518 aa		13.35	□□□□□ -0.27
ILF3-222	ENST00000592763	NUCB1	Q02818	461 aa		13.34	□□□□□ -0.27
ILF3-222	ENST00000592763	GORAB	Q5T7V8	394 aa		13.34	□□□□□ -0.27
ILF3-222	ENST00000592763	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.34	□□□□□ -0.27
ILF3-222	ENST00000592763	SSH2	Q76I76	1423 aa		13.34	□□□□□ -0.27
ILF3-222	ENST00000592763	A1BG	P04217	495 aa		13.34	□□□□□ -0.27
ILF3-222	ENST00000592763	TPRN	Q4KMQ1	711 aa		13.34	□□□□□ -0.27
ILF3-222	ENST00000592763	ANKRD44	Q8N8A2	993 aa		13.34	□□□□□ -0.27
ILF3-222	ENST00000592763	KIF24	Q5T7B8	1368 aa		13.34	□□□□□ -0.27
ILF3-222	ENST00000592763	UBE3B	Q7Z3V4	1068 aa		13.34	□□□□□ -0.27
ILF3-222	ENST00000592763	SMC5	Q8IY18	1101 aa		13.34	□□□□□ -0.27
ILF3-222	ENST00000592763	ABCC4	O15439	1325 aa		13.33	□□□□□ -0.28
ILF3-222	ENST00000592763	GPT	P24298	496 aa		13.33	□□□□□ -0.28
ILF3-222	ENST00000592763	NEUROD6	Q96NK8	337 aa		13.33	□□□□□ -0.28
ILF3-222	ENST00000592763		A0A087WZG4	1122 aa		13.33	□□□□□ -0.28
ILF3-222	ENST00000592763	CLASRP	Q8N2M8	674 aa	Known RBP	13.33	□□□□□ -0.28
ILF3-222	ENST00000592763	ANO2	Q9NQ90	1003 aa		13.33	□□□□□ -0.28
ILF3-222	ENST00000592763	ITSN1	Q15811	1721 aa		13.32	□□□□□ -0.28
ILF3-222	ENST00000592763	KDR	P35968	1356 aa		13.32	□□□□□ -0.28
ILF3-222	ENST00000592763	PNMA6E	A0A0J9YXQ4	647 aa		13.32	□□□□□ -0.28
ILF3-222	ENST00000592763	KSR2	Q6VAB6	950 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 49 ms