RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 CCDC27Q2M243 656 aa22.69■■□□□ 1.22
AP3D1-211ENST00000591650 CABP4P57796 275 aa22.68■■□□□ 1.22
AP3D1-211ENST00000591650 NCBP3Q53F19 620 aaKnown RBP22.68■■□□□ 1.22
AP3D1-211ENST00000591650 TMOD3Q9NYL9 352 aa22.68■■□□□ 1.22
AP3D1-211ENST00000591650 TEFQ10587 303 aa22.67■■□□□ 1.22
AP3D1-211ENST00000591650 WWC1Q8IX03 1113 aa22.67■■□□□ 1.22
AP3D1-211ENST00000591650 PIGBQ92521 554 aa22.67■■□□□ 1.22
AP3D1-211ENST00000591650 BCL11BQ9C0K0 894 aaPredicted RBP22.67■■□□□ 1.22
AP3D1-211ENST00000591650 LY75O60449 1722 aa22.67■■□□□ 1.22
AP3D1-211ENST00000591650 RGPD3A6NKT7 1758 aaPredicted RBP22.67■■□□□ 1.22
AP3D1-211ENST00000591650 RGPD4Q7Z3J3 1758 aa22.67■■□□□ 1.22
AP3D1-211ENST00000591650 NFATC2IPQ8NCF5 419 aa22.66■■□□□ 1.22
AP3D1-211ENST00000591650 ZNF521Q96K83 1311 aa22.66■■□□□ 1.22
AP3D1-211ENST00000591650 NGEFQ8N5V2 710 aa22.65■■□□□ 1.22
AP3D1-211ENST00000591650 KCPQ6ZWJ8 1503 aa22.64■■□□□ 1.22
AP3D1-211ENST00000591650 CCDC125Q86Z20 511 aa22.64■■□□□ 1.21
AP3D1-211ENST00000591650 APBA3O96018 575 aa22.62■■□□□ 1.21
AP3D1-211ENST00000591650 DEFB132Q7Z7B7 95 aa22.62■■□□□ 1.21
AP3D1-211ENST00000591650 C5P01031 1676 aa22.61■■□□□ 1.21
AP3D1-211ENST00000591650 TJP1Q07157 1748 aa22.61■■□□□ 1.21
AP3D1-211ENST00000591650 CICQ96RK0 1608 aaPredicted RBP22.61■■□□□ 1.21
AP3D1-211ENST00000591650 SLC39A6Q13433 755 aa22.6■■□□□ 1.21
AP3D1-211ENST00000591650 TAF7Q15545 349 aaPredicted RBP22.6■■□□□ 1.21
AP3D1-211ENST00000591650 MIS18AQ9NYP9 233 aa22.6■■□□□ 1.21
AP3D1-211ENST00000591650 ASAP1Q9ULH1 1129 aa22.6■■□□□ 1.21
AP3D1-211ENST00000591650 SF3B2Q13435 895 aaKnown RBP22.59■■□□□ 1.21
AP3D1-211ENST00000591650 YTHDC1Q96MU7 727 aaKnown RBP22.59■■□□□ 1.21
AP3D1-211ENST00000591650 ATG3Q9NT62 314 aa22.59■■□□□ 1.21
AP3D1-211ENST00000591650 PALLDQ8WX93 1383 aa22.59■■□□□ 1.21
AP3D1-211ENST00000591650 RREB1Q92766 1687 aa22.59■■□□□ 1.21
AP3D1-211ENST00000591650 ZNF831Q5JPB2 1677 aa22.58■■□□□ 1.21
AP3D1-211ENST00000591650 ZBED9Q6R2W3 1325 aa22.58■■□□□ 1.21
AP3D1-211ENST00000591650 BTBD11A6QL63 1104 aa22.58■■□□□ 1.21
AP3D1-211ENST00000591650 CALD1Q05682 793 aaKnown RBP22.58■■□□□ 1.21
AP3D1-211ENST00000591650 LAS1LQ9Y4W2 734 aaKnown RBP22.58■■□□□ 1.21
AP3D1-211ENST00000591650 IL16Q14005 1332 aa22.57■■□□□ 1.2
AP3D1-211ENST00000591650 KCNQ3O43525 872 aa22.57■■□□□ 1.2
AP3D1-211ENST00000591650 ZNF853P0CG23 659 aa22.57■■□□□ 1.2
AP3D1-211ENST00000591650 EN1Q05925 392 aaPredicted RBP22.57■■□□□ 1.2
AP3D1-211ENST00000591650 WDR63Q8IWG1 891 aa22.57■■□□□ 1.2
AP3D1-211ENST00000591650 SPINK5Q9NQ38 1064 aaPredicted RBP22.57■■□□□ 1.2
AP3D1-211ENST00000591650 IFT57Q9NWB7 429 aa22.57■■□□□ 1.2
AP3D1-211ENST00000591650 TAF1LQ8IZX4 1826 aa22.57■■□□□ 1.2
AP3D1-211ENST00000591650 LAMB4A4D0S4 1761 aa22.57■■□□□ 1.2
AP3D1-211ENST00000591650 CFAP44Q96MT7 982 aa22.57■■□□□ 1.2
AP3D1-211ENST00000591650 TSPYL4Q9UJ04 414 aa22.57■■□□□ 1.2
AP3D1-211ENST00000591650 COL5A3P25940 1745 aaPredicted RBP22.56■■□□□ 1.2
AP3D1-211ENST00000591650 BAG6P46379 1132 aa22.56■■□□□ 1.2
AP3D1-211ENST00000591650 ZNF790Q6PG37 636 aa22.56■■□□□ 1.2
AP3D1-211ENST00000591650 CAMKK2Q96RR4 588 aa22.56■■□□□ 1.2
AP3D1-211ENST00000591650 NUP188Q5SRE5 1749 aa22.55■■□□□ 1.2
AP3D1-211ENST00000591650 CHL1O00533 1208 aa22.55■■□□□ 1.2
AP3D1-211ENST00000591650 GNAI1P63096 354 aa22.55■■□□□ 1.2
AP3D1-211ENST00000591650 MBIPQ9NS73 344 aa22.55■■□□□ 1.2
AP3D1-211ENST00000591650 PLSCR1O15162 318 aa22.54■■□□□ 1.2
AP3D1-211ENST00000591650 EZH2Q15910 746 aaKnown RBP22.54■■□□□ 1.2
AP3D1-211ENST00000591650 TSR2Q969E8 191 aaKnown RBP22.54■■□□□ 1.2
AP3D1-211ENST00000591650 TTC5Q8N0Z6 440 aa22.53■■□□□ 1.2
AP3D1-211ENST00000591650 PROM2Q8N271 834 aa22.53■■□□□ 1.2
AP3D1-211ENST00000591650 SMARCC1Q92922 1105 aaPredicted RBP22.53■■□□□ 1.2
AP3D1-211ENST00000591650 BABAM1Q9NWV8 329 aa22.53■■□□□ 1.2
AP3D1-211ENST00000591650 FANCIQ9NVI1 1328 aa22.52■■□□□ 1.2
AP3D1-211ENST00000591650 GOLGA2Q08379 1002 aa22.52■■□□□ 1.2
AP3D1-211ENST00000591650 CDCA7LQ96GN5 454 aa22.52■■□□□ 1.2
AP3D1-211ENST00000591650 ZNF496Q96IT1 587 aaPredicted RBP22.52■■□□□ 1.2
AP3D1-211ENST00000591650 PTCD1O75127 700 aaKnown RBP22.51■■□□□ 1.19
AP3D1-211ENST00000591650 SLC4A9Q96Q91 983 aa22.5■■□□□ 1.19
AP3D1-211ENST00000591650 RBM42Q9BTD8 480 aaKnown RBP22.49■■□□□ 1.19
AP3D1-211ENST00000591650 HEG1Q9ULI3 1381 aa22.49■■□□□ 1.19
AP3D1-211ENST00000591650 LOC102724428A0A0B4J2F2 783 aa22.48■■□□□ 1.19
AP3D1-211ENST00000591650 SIK1P57059 783 aa22.48■■□□□ 1.19
AP3D1-211ENST00000591650 EIF4A1P60842 406 aaKnown RBP22.48■■□□□ 1.19
AP3D1-211ENST00000591650 KRT24Q2M2I5 525 aa22.48■■□□□ 1.19
AP3D1-211ENST00000591650 E9PSI1 815 aa22.48■■□□□ 1.19
AP3D1-211ENST00000591650 KCNQ4P56696 695 aa22.48■■□□□ 1.19
AP3D1-211ENST00000591650 SLFN5Q08AF3 891 aa22.48■■□□□ 1.19
AP3D1-211ENST00000591650 TXNRD1Q16881 649 aa22.48■■□□□ 1.19
AP3D1-211ENST00000591650 FMNL2Q96PY5 1086 aa22.48■■□□□ 1.19
AP3D1-211ENST00000591650 C4BP0C0L5 1744 aa22.47■■□□□ 1.19
AP3D1-211ENST00000591650 MYH16Q9H6N6 1097 aa22.47■■□□□ 1.19
AP3D1-211ENST00000591650 LRRC4BQ9NT99 713 aa22.47■■□□□ 1.19
AP3D1-211ENST00000591650 CCNL1Q9UK58 526 aaPredicted RBP22.47■■□□□ 1.19
AP3D1-211ENST00000591650 TUBGCP6Q96RT7 1819 aa22.46■■□□□ 1.19
AP3D1-211ENST00000591650 MYH14Q7Z406 1995 aaKnown RBP22.45■■□□□ 1.18
AP3D1-211ENST00000591650 PRAMEF22A3QJZ6 481 aa22.45■■□□□ 1.18
AP3D1-211ENST00000591650 ITPK1Q13572 414 aa22.45■■□□□ 1.18
AP3D1-211ENST00000591650 ATP6V1AP38606 617 aa22.43■■□□□ 1.18
AP3D1-211ENST00000591650 DNAJC10Q8IXB1 793 aa22.43■■□□□ 1.18
AP3D1-211ENST00000591650 TRMT2AQ8IZ69 625 aaKnown RBP22.43■■□□□ 1.18
AP3D1-211ENST00000591650 DUSP27Q5VZP5 1158 aa22.42■■□□□ 1.18
AP3D1-211ENST00000591650 VSIG10Q8N0Z9 540 aa22.42■■□□□ 1.18
AP3D1-211ENST00000591650 UBR3Q6ZT12 1888 aa22.41■■□□□ 1.18
AP3D1-211ENST00000591650 GIGYF1O75420 1035 aaPredicted RBP22.41■■□□□ 1.18
AP3D1-211ENST00000591650 SLC27A3Q5K4L6 730 aa22.41■■□□□ 1.18
AP3D1-211ENST00000591650 C8orf58Q8NAV2 365 aa22.41■■□□□ 1.18
AP3D1-211ENST00000591650 LINC00116Q8NCU8 138 aa22.41■■□□□ 1.18
AP3D1-211ENST00000591650 SNRPA1P09661 255 aaKnown RBP22.4■■□□□ 1.18
AP3D1-211ENST00000591650 EXOSC9Q06265 439 aaKnown RBP22.4■■□□□ 1.18
AP3D1-211ENST00000591650 TSPYL6Q8N831 410 aa22.4■■□□□ 1.18
AP3D1-211ENST00000591650 ELL2O00472 640 aaPredicted RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms