RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 CCDC183Q5T5S1 534 aa18.22■□□□□ 0.51
CIRBP-228ENST00000590347 SRCIN1Q9C0H9 1055 aa18.22■□□□□ 0.51
CIRBP-228ENST00000590347 KIF1BO60333 1816 aa18.22■□□□□ 0.51
CIRBP-228ENST00000590347 DIP2CQ9Y2E4 1556 aa18.22■□□□□ 0.51
CIRBP-228ENST00000590347 FBLN1P23142 703 aa18.21■□□□□ 0.51
CIRBP-228ENST00000590347 ESF1Q9H501 851 aaKnown RBP18.21■□□□□ 0.51
CIRBP-228ENST00000590347 MORC2Q9Y6X9 1032 aaPredicted RBP18.21■□□□□ 0.51
CIRBP-228ENST00000590347 USP27XA6NNY8 438 aa18.21■□□□□ 0.51
CIRBP-228ENST00000590347 FEZ2Q9UHY8 353 aaPredicted RBP18.21■□□□□ 0.51
CIRBP-228ENST00000590347 IQGAP1P46940 1657 aa18.21■□□□□ 0.5
CIRBP-228ENST00000590347 WAPLQ7Z5K2 1190 aa18.21■□□□□ 0.5
CIRBP-228ENST00000590347 CKAP2LQ8IYA6 745 aa18.21■□□□□ 0.5
CIRBP-228ENST00000590347 RGS22Q8NE09 1264 aa18.21■□□□□ 0.5
CIRBP-228ENST00000590347 LAMC1P11047 1609 aa18.2■□□□□ 0.5
CIRBP-228ENST00000590347 ARHGAP31Q2M1Z3 1444 aa18.2■□□□□ 0.5
CIRBP-228ENST00000590347 RBM6P78332 1123 aaKnown RBP18.2■□□□□ 0.5
CIRBP-228ENST00000590347 FAM184AQ8NB25 1140 aa18.2■□□□□ 0.5
CIRBP-228ENST00000590347 RSPH14Q9UHP6 348 aa18.2■□□□□ 0.5
CIRBP-228ENST00000590347 TRIM66O15016 1216 aa18.2■□□□□ 0.5
CIRBP-228ENST00000590347 KRT24Q2M2I5 525 aa18.2■□□□□ 0.5
CIRBP-228ENST00000590347 CALCOCO1Q9P1Z2 691 aa18.2■□□□□ 0.5
CIRBP-228ENST00000590347 TOMM22Q9NS69 142 aa18.19■□□□□ 0.5
CIRBP-228ENST00000590347 TCHHQ07283 1943 aa18.19■□□□□ 0.5
CIRBP-228ENST00000590347 MYOM2P54296 1465 aa18.19■□□□□ 0.5
CIRBP-228ENST00000590347 RAD51AP2Q09MP3 1159 aa18.19■□□□□ 0.5
CIRBP-228ENST00000590347 C10orf67Q8IYJ2 551 aa18.19■□□□□ 0.5
CIRBP-228ENST00000590347 GGNBP2Q9H3C7 697 aa18.19■□□□□ 0.5
CIRBP-228ENST00000590347 ANO2Q9NQ90 1003 aa18.19■□□□□ 0.5
CIRBP-228ENST00000590347 SLC52A1Q9NWF4 448 aa18.19■□□□□ 0.5
CIRBP-228ENST00000590347 MX1P20591 662 aa18.18■□□□□ 0.5
CIRBP-228ENST00000590347 UVSSAQ2YD98 709 aa18.18■□□□□ 0.5
CIRBP-228ENST00000590347 ADGRB3O60242 1522 aa18.18■□□□□ 0.5
CIRBP-228ENST00000590347 CFAP74Q9C0B2 1584 aa18.18■□□□□ 0.5
CIRBP-228ENST00000590347 LMTK2Q8IWU2 1503 aa18.18■□□□□ 0.5
CIRBP-228ENST00000590347 SMTNL1A8MU46 457 aa18.17■□□□□ 0.5
CIRBP-228ENST00000590347 SIGLEC1Q9BZZ2 1709 aa18.17■□□□□ 0.5
CIRBP-228ENST00000590347 IQSEC2Q5JU85 1478 aa18.17■□□□□ 0.5
CIRBP-228ENST00000590347 NOL10Q9BSC4 688 aaKnown RBP18.17■□□□□ 0.5
CIRBP-228ENST00000590347 CASC1Q6TDU7 716 aa18.16■□□□□ 0.5
CIRBP-228ENST00000590347 TRIM5Q9C035 493 aa18.16■□□□□ 0.5
CIRBP-228ENST00000590347 FAM173BQ6P4H8 233 aa18.16■□□□□ 0.5
CIRBP-228ENST00000590347 LRRN4CLQ8ND94 238 aa18.16■□□□□ 0.5
CIRBP-228ENST00000590347 DDX54Q8TDD1 881 aaKnown RBP18.16■□□□□ 0.5
CIRBP-228ENST00000590347 RPGRIP1LQ68CZ1 1315 aa18.16■□□□□ 0.5
CIRBP-228ENST00000590347 EVC2Q86UK5 1308 aa18.15■□□□□ 0.5
CIRBP-228ENST00000590347 NPC1L1Q9UHC9 1359 aa18.15■□□□□ 0.5
CIRBP-228ENST00000590347 LOC102724159A0A0B4J2E5 919 aa18.15■□□□□ 0.5
CIRBP-228ENST00000590347 NUTM2FA1L443 756 aa18.15■□□□□ 0.5
CIRBP-228ENST00000590347 TULP2O00295 520 aa18.15■□□□□ 0.5
CIRBP-228ENST00000590347 CEBPAP49715 358 aaPredicted RBP18.15■□□□□ 0.5
CIRBP-228ENST00000590347 PWP2Q15269 919 aaKnown RBP18.15■□□□□ 0.5
CIRBP-228ENST00000590347 ANKRD36BQ8N2N9 1353 aa18.15■□□□□ 0.5
CIRBP-228ENST00000590347 RILPL2Q969X0 211 aa18.15■□□□□ 0.5
CIRBP-228ENST00000590347 ZNF446Q9NWS9 450 aa18.15■□□□□ 0.5
CIRBP-228ENST00000590347 LCMT1Q9UIC8 334 aa18.15■□□□□ 0.5
CIRBP-228ENST00000590347 ERC2O15083 957 aa18.14■□□□□ 0.5
CIRBP-228ENST00000590347 GORABQ5T7V8 394 aa18.14■□□□□ 0.5
CIRBP-228ENST00000590347 CEP135Q66GS9 1140 aa18.14■□□□□ 0.5
CIRBP-228ENST00000590347 ZCCHC17Q9NP64 241 aaKnown RBP18.14■□□□□ 0.5
CIRBP-228ENST00000590347 REC8O95072 547 aa18.14■□□□□ 0.49
CIRBP-228ENST00000590347 CPA1P15085 419 aa18.14■□□□□ 0.49
CIRBP-228ENST00000590347 GOLGA6L6A8MZA4 724 aa18.14■□□□□ 0.49
CIRBP-228ENST00000590347 PRR29P0C7W0 189 aa18.14■□□□□ 0.49
CIRBP-228ENST00000590347 DNM1Q05193 864 aaKnown RBP18.14■□□□□ 0.49
CIRBP-228ENST00000590347 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.14■□□□□ 0.49
CIRBP-228ENST00000590347 CACTINQ8WUQ7 758 aaKnown RBP18.14■□□□□ 0.49
CIRBP-228ENST00000590347 A0A087WWV3 80 aa18.13■□□□□ 0.49
CIRBP-228ENST00000590347 EP400NLQ6ZTU2 488 aa18.13■□□□□ 0.49
CIRBP-228ENST00000590347 ZNF397Q8NF99 534 aaPredicted RBP18.13■□□□□ 0.49
CIRBP-228ENST00000590347 FBXW7Q969H0 707 aa18.13■□□□□ 0.49
CIRBP-228ENST00000590347 CCDC144BQ3MJ40 725 aa18.12■□□□□ 0.49
CIRBP-228ENST00000590347 CCDC144CPQ8IYA2 1237 aa18.12■□□□□ 0.49
CIRBP-228ENST00000590347 CAMSAP1Q5T5Y3 1602 aa18.12■□□□□ 0.49
CIRBP-228ENST00000590347 ERCC6LQ2NKX8 1250 aa18.12■□□□□ 0.49
CIRBP-228ENST00000590347 FERMT3Q86UX7 667 aa18.12■□□□□ 0.49
CIRBP-228ENST00000590347 SYT10Q6XYQ8 523 aa18.12■□□□□ 0.49
CIRBP-228ENST00000590347 EXOC6BQ9Y2D4 811 aa18.12■□□□□ 0.49
CIRBP-228ENST00000590347 HMOX1P09601 288 aa18.11■□□□□ 0.49
CIRBP-228ENST00000590347 ZSCAN25Q6NSZ9 544 aa18.11■□□□□ 0.49
CIRBP-228ENST00000590347 NCKAP5LQ9HCH0 1330 aa18.11■□□□□ 0.49
CIRBP-228ENST00000590347 RICTORQ6R327 1708 aa18.11■□□□□ 0.49
CIRBP-228ENST00000590347 ST5P78524 1137 aa18.11■□□□□ 0.49
CIRBP-228ENST00000590347 NRXN1Q9ULB1 1477 aa18.11■□□□□ 0.49
CIRBP-228ENST00000590347 MAP4K4O95819 1239 aaPredicted RBP18.1■□□□□ 0.49
CIRBP-228ENST00000590347 CABP1Q9NZU7 370 aa18.1■□□□□ 0.49
CIRBP-228ENST00000590347 MYOM1P52179 1685 aa18.1■□□□□ 0.49
CIRBP-228ENST00000590347 TXNDC2Q86VQ3 553 aa18.1■□□□□ 0.49
CIRBP-228ENST00000590347 FILIP1Q7Z7B0 1213 aa18.09■□□□□ 0.49
CIRBP-228ENST00000590347 NFATC2IPQ8NCF5 419 aa18.09■□□□□ 0.49
CIRBP-228ENST00000590347 VPS37CA5D8V6 355 aaPredicted RBP18.09■□□□□ 0.49
CIRBP-228ENST00000590347 KRBA2Q6ZNG9 492 aa18.09■□□□□ 0.49
CIRBP-228ENST00000590347 WDR33Q9C0J8 1336 aaKnown RBP18.09■□□□□ 0.49
CIRBP-228ENST00000590347 DHX37Q8IY37 1157 aaKnown RBP18.09■□□□□ 0.49
CIRBP-228ENST00000590347 MRPL50Q8N5N7 158 aaKnown RBP18.09■□□□□ 0.49
CIRBP-228ENST00000590347 ADGRB1O14514 1584 aa18.09■□□□□ 0.49
CIRBP-228ENST00000590347 ANKRD65E5RJM6 399 aa18.08■□□□□ 0.49
CIRBP-228ENST00000590347 KLHL34Q8N239 644 aa18.08■□□□□ 0.49
CIRBP-228ENST00000590347 CDK19Q9BWU1 502 aa18.08■□□□□ 0.49
CIRBP-228ENST00000590347 KDM5AP29375 1690 aaKnown RBP18.08■□□□□ 0.49
CIRBP-228ENST00000590347 ANO6Q4KMQ2 910 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms