RNA–Protein interactions for RNA: ENST00000590234.5

CXXC1-213, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-213ENST00000590234 ZNF827Q17R98 1081 aa19.44■□□□□ 0.7
CXXC1-213ENST00000590234 LOC102724428A0A0B4J2F2 783 aa19.43■□□□□ 0.7
CXXC1-213ENST00000590234 ANP32CO43423 234 aa19.43■□□□□ 0.7
CXXC1-213ENST00000590234 HMGB2P26583 209 aaKnown RBP19.43■□□□□ 0.7
CXXC1-213ENST00000590234 SIK1P57059 783 aa19.43■□□□□ 0.7
CXXC1-213ENST00000590234 AKT1S1Q96B36 256 aa19.43■□□□□ 0.7
CXXC1-213ENST00000590234 TAF1LQ8IZX4 1826 aa19.43■□□□□ 0.7
CXXC1-213ENST00000590234 WDR43Q15061 677 aaKnown RBP eCLIP19.42■□□□□ 0.7
CXXC1-213ENST00000590234 PLEKHF1Q96S99 279 aa19.42■□□□□ 0.7
CXXC1-213ENST00000590234 MAPK8IP3Q9UPT6 1336 aa19.42■□□□□ 0.7
CXXC1-213ENST00000590234 CASZ1Q86V15 1759 aa19.42■□□□□ 0.7
CXXC1-213ENST00000590234 QSER1Q2KHR3 1735 aa19.4■□□□□ 0.7
CXXC1-213ENST00000590234 ATP6V1AP38606 617 aa19.4■□□□□ 0.7
CXXC1-213ENST00000590234 TEFQ10587 303 aa19.4■□□□□ 0.7
CXXC1-213ENST00000590234 IL17REQ8NFR9 667 aa19.4■□□□□ 0.7
CXXC1-213ENST00000590234 RBM42Q9BTD8 480 aaKnown RBP19.4■□□□□ 0.7
CXXC1-213ENST00000590234 LRP5O75197 1615 aa19.4■□□□□ 0.7
CXXC1-213ENST00000590234 ZNF831Q5JPB2 1677 aa19.4■□□□□ 0.7
CXXC1-213ENST00000590234 RTF1Q92541 710 aaKnown RBP19.39■□□□□ 0.69
CXXC1-213ENST00000590234 TFCP2L1Q9NZI6 479 aa19.39■□□□□ 0.69
CXXC1-213ENST00000590234 CEMIPQ8WUJ3 1361 aa19.39■□□□□ 0.69
CXXC1-213ENST00000590234 C4BP0C0L5 1744 aa19.39■□□□□ 0.69
CXXC1-213ENST00000590234 TUBGCP6Q96RT7 1819 aa19.39■□□□□ 0.69
CXXC1-213ENST00000590234 SIPA1L3O60292 1781 aaPredicted RBP19.38■□□□□ 0.69
CXXC1-213ENST00000590234 DLG5Q8TDM6 1919 aa19.37■□□□□ 0.69
CXXC1-213ENST00000590234 HTATSF1O43719 755 aaKnown RBP19.37■□□□□ 0.69
CXXC1-213ENST00000590234 PTCD1O75127 700 aaKnown RBP19.37■□□□□ 0.69
CXXC1-213ENST00000590234 ITPK1Q13572 414 aa19.37■□□□□ 0.69
CXXC1-213ENST00000590234 PDGFDQ9GZP0 370 aaPredicted RBP19.37■□□□□ 0.69
CXXC1-213ENST00000590234 SLC39A6Q13433 755 aa19.36■□□□□ 0.69
CXXC1-213ENST00000590234 NFE2L2Q16236 605 aa19.36■□□□□ 0.69
CXXC1-213ENST00000590234 MCM10Q7L590 875 aa19.36■□□□□ 0.69
CXXC1-213ENST00000590234 LINC00116Q8NCU8 138 aa19.36■□□□□ 0.69
CXXC1-213ENST00000590234 SLC4A9Q96Q91 983 aa19.36■□□□□ 0.69
CXXC1-213ENST00000590234 PNPLA7Q6ZV29 1317 aa19.35■□□□□ 0.69
CXXC1-213ENST00000590234 AK7Q96M32 723 aa19.35■□□□□ 0.69
CXXC1-213ENST00000590234 ADAMTS8Q9UP79 889 aa19.35■□□□□ 0.69
CXXC1-213ENST00000590234 COL5A3P25940 1745 aaPredicted RBP19.34■□□□□ 0.69
CXXC1-213ENST00000590234 CICQ96RK0 1608 aaPredicted RBP19.34■□□□□ 0.69
CXXC1-213ENST00000590234 CCDC146Q8IYE0 955 aa19.34■□□□□ 0.69
CXXC1-213ENST00000590234 KCPQ6ZWJ8 1503 aa19.34■□□□□ 0.69
CXXC1-213ENST00000590234 UBR2Q8IWV8 1755 aa19.34■□□□□ 0.69
CXXC1-213ENST00000590234 DCTN1Q14203 1278 aa19.33■□□□□ 0.68
CXXC1-213ENST00000590234 TTC5Q8N0Z6 440 aa19.33■□□□□ 0.68
CXXC1-213ENST00000590234 TJP1Q07157 1748 aa19.33■□□□□ 0.68
CXXC1-213ENST00000590234 ZBTB7AO95365 584 aa19.32■□□□□ 0.68
CXXC1-213ENST00000590234 CCDC184Q52MB2 194 aa19.32■□□□□ 0.68
CXXC1-213ENST00000590234 RUNDC1Q96C34 613 aa19.32■□□□□ 0.68
CXXC1-213ENST00000590234 SPON1Q9HCB6 807 aa19.32■□□□□ 0.68
CXXC1-213ENST00000590234 UBR3Q6ZT12 1888 aa19.31■□□□□ 0.68
CXXC1-213ENST00000590234 BTBD11A6QL63 1104 aa19.31■□□□□ 0.68
CXXC1-213ENST00000590234 ZNF790Q6PG37 636 aa19.31■□□□□ 0.68
CXXC1-213ENST00000590234 RIPK4P57078 832 aa19.3■□□□□ 0.68
CXXC1-213ENST00000590234 FLAD1Q8NFF5 587 aa19.3■□□□□ 0.68
CXXC1-213ENST00000590234 MTFR1LQ9H019 292 aa19.3■□□□□ 0.68
CXXC1-213ENST00000590234 MRS2Q9HD23 443 aa19.3■□□□□ 0.68
CXXC1-213ENST00000590234 CNTNAP4Q9C0A0 1308 aa19.29■□□□□ 0.68
CXXC1-213ENST00000590234 GNPATO15228 680 aa19.29■□□□□ 0.68
CXXC1-213ENST00000590234 MSH5O43196 834 aa19.29■□□□□ 0.68
CXXC1-213ENST00000590234 TMPOP42166 694 aaKnown RBP19.29■□□□□ 0.68
CXXC1-213ENST00000590234 COL23A1Q86Y22 540 aaPredicted RBP19.29■□□□□ 0.68
CXXC1-213ENST00000590234 SLC16A10Q8TF71 515 aa19.29■□□□□ 0.68
CXXC1-213ENST00000590234 PHF14O94880 888 aa19.28■□□□□ 0.68
CXXC1-213ENST00000590234 SSFA2P28290 1259 aa19.28■□□□□ 0.68
CXXC1-213ENST00000590234 LMOD3Q0VAK6 560 aa19.28■□□□□ 0.68
CXXC1-213ENST00000590234 RC3H1Q5TC82 1133 aaKnown RBP19.28■□□□□ 0.68
CXXC1-213ENST00000590234 VSIG10Q8N0Z9 540 aa19.28■□□□□ 0.68
CXXC1-213ENST00000590234 ATF5Q9Y2D1 282 aaPredicted RBP19.28■□□□□ 0.68
CXXC1-213ENST00000590234 AMIGO3Q86WK7 504 aa19.27■□□□□ 0.68
CXXC1-213ENST00000590234 DNAJC10Q8IXB1 793 aa19.27■□□□□ 0.68
CXXC1-213ENST00000590234 ZNF496Q96IT1 587 aaPredicted RBP19.27■□□□□ 0.68
CXXC1-213ENST00000590234 RRP7AQ9Y3A4 280 aaKnown RBP19.27■□□□□ 0.68
CXXC1-213ENST00000590234 SRCAPQ6ZRS2 3230 aa19.27■□□□□ 0.67
CXXC1-213ENST00000590234 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.26■□□□□ 0.67
CXXC1-213ENST00000590234 CRKLP46109 303 aaKnown RBP19.26■□□□□ 0.67
CXXC1-213ENST00000590234 TAF7Q15545 349 aaPredicted RBP19.26■□□□□ 0.67
CXXC1-213ENST00000590234 NEUROD2Q15784 382 aa19.26■□□□□ 0.67
CXXC1-213ENST00000590234 THUMPD2Q9BTF0 503 aaKnown RBP19.26■□□□□ 0.67
CXXC1-213ENST00000590234 RTCBQ9Y3I0 505 aaKnown RBP19.26■□□□□ 0.67
CXXC1-213ENST00000590234 HEG1Q9ULI3 1381 aa19.26■□□□□ 0.67
CXXC1-213ENST00000590234 MYH14Q7Z406 1995 aaKnown RBP19.25■□□□□ 0.67
CXXC1-213ENST00000590234 KCNQ3O43525 872 aa19.25■□□□□ 0.67
CXXC1-213ENST00000590234 SMIM5Q71RC9 77 aa19.25■□□□□ 0.67
CXXC1-213ENST00000590234 FMNL2Q96PY5 1086 aa19.25■□□□□ 0.67
CXXC1-213ENST00000590234 PTGER2P43116 358 aa19.24■□□□□ 0.67
CXXC1-213ENST00000590234 PNISRQ8TF01 805 aaKnown RBP19.24■□□□□ 0.67
CXXC1-213ENST00000590234 PPP1R1BQ9UD71 204 aaPredicted RBP19.24■□□□□ 0.67
CXXC1-213ENST00000590234 RPS6KA4O75676 772 aa19.23■□□□□ 0.67
CXXC1-213ENST00000590234 KDM3BQ7LBC6 1761 aa19.23■□□□□ 0.67
CXXC1-213ENST00000590234 COL24A1Q17RW2 1714 aa19.22■□□□□ 0.67
CXXC1-213ENST00000590234 CYP19A1P11511 503 aaPredicted RBP19.22■□□□□ 0.67
CXXC1-213ENST00000590234 ADRA2BP18089 450 aa19.22■□□□□ 0.67
CXXC1-213ENST00000590234 TRAPPC3LQ5T215 181 aa19.22■□□□□ 0.67
CXXC1-213ENST00000590234 SGIP1Q9BQI5 828 aa19.22■□□□□ 0.67
CXXC1-213ENST00000590234 TEX13AQ9BXU3 409 aaPredicted RBP19.22■□□□□ 0.67
CXXC1-213ENST00000590234 CCDC87Q9NVE4 849 aa19.22■□□□□ 0.67
CXXC1-213ENST00000590234 STARD3NLO95772 234 aa19.21■□□□□ 0.67
CXXC1-213ENST00000590234 INTS5Q6P9B9 1019 aaKnown RBP19.21■□□□□ 0.67
CXXC1-213ENST00000590234 MIS18AQ9NYP9 233 aa19.21■□□□□ 0.67
CXXC1-213ENST00000590234 APAF1O14727 1248 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms