RNA–Protein interactions for RNA: ENST00000590153.1

SSH2-211, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 4 BASIC

Gene SSH2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-211ENST00000590153 CCDC184Q52MB2 194 aa21.91■■□□□ 1.1
SSH2-211ENST00000590153 PDGFDQ9GZP0 370 aaPredicted RBP21.91■■□□□ 1.1
SSH2-211ENST00000590153 MRC1P22897 1456 aa21.9■■□□□ 1.1
SSH2-211ENST00000590153 MAP3K5Q99683 1374 aa21.9■■□□□ 1.1
SSH2-211ENST00000590153 TAF1LQ8IZX4 1826 aa21.9■■□□□ 1.1
SSH2-211ENST00000590153 CEMIPQ8WUJ3 1361 aa21.89■■□□□ 1.1
SSH2-211ENST00000590153 SLC4A9Q96Q91 983 aa21.89■■□□□ 1.09
SSH2-211ENST00000590153 CCNL1Q9UK58 526 aaPredicted RBP21.89■■□□□ 1.09
SSH2-211ENST00000590153 QSER1Q2KHR3 1735 aa21.89■■□□□ 1.09
SSH2-211ENST00000590153 LOC102724428A0A0B4J2F2 783 aa21.88■■□□□ 1.09
SSH2-211ENST00000590153 HTATSF1O43719 755 aaKnown RBP21.88■■□□□ 1.09
SSH2-211ENST00000590153 SIK1P57059 783 aa21.88■■□□□ 1.09
SSH2-211ENST00000590153 PNNQ9H307 717 aaKnown RBP21.88■■□□□ 1.09
SSH2-211ENST00000590153 ADAMTS8Q9UP79 889 aa21.88■■□□□ 1.09
SSH2-211ENST00000590153 DLG5Q8TDM6 1919 aa21.87■■□□□ 1.09
SSH2-211ENST00000590153 ZNF827Q17R98 1081 aa21.87■■□□□ 1.09
SSH2-211ENST00000590153 ZNF831Q5JPB2 1677 aa21.87■■□□□ 1.09
SSH2-211ENST00000590153 STK32BQ9NY57 414 aa21.86■■□□□ 1.09
SSH2-211ENST00000590153 SIPA1L3O60292 1781 aaPredicted RBP21.86■■□□□ 1.09
SSH2-211ENST00000590153 ANP32CO43423 234 aa21.85■■□□□ 1.09
SSH2-211ENST00000590153 ITPK1Q13572 414 aa21.84■■□□□ 1.09
SSH2-211ENST00000590153 NFE2L2Q16236 605 aa21.84■■□□□ 1.09
SSH2-211ENST00000590153 COL24A1Q17RW2 1714 aa21.83■■□□□ 1.08
SSH2-211ENST00000590153 HMGB2P26583 209 aaKnown RBP21.82■■□□□ 1.08
SSH2-211ENST00000590153 C5P01031 1676 aa21.82■■□□□ 1.08
SSH2-211ENST00000590153 SLC39A6Q13433 755 aa21.81■■□□□ 1.08
SSH2-211ENST00000590153 PNISRQ8TF01 805 aaKnown RBP21.81■■□□□ 1.08
SSH2-211ENST00000590153 ATP6V1AP38606 617 aa21.8■■□□□ 1.08
SSH2-211ENST00000590153 DCTN1Q14203 1278 aa21.8■■□□□ 1.08
SSH2-211ENST00000590153 WDR43Q15061 677 aaKnown RBP eCLIP21.8■■□□□ 1.08
SSH2-211ENST00000590153 MCM10Q7L590 875 aa21.8■■□□□ 1.08
SSH2-211ENST00000590153 LINC00116Q8NCU8 138 aa21.8■■□□□ 1.08
SSH2-211ENST00000590153 RUNDC1Q96C34 613 aa21.8■■□□□ 1.08
SSH2-211ENST00000590153 TMPOP42166 694 aaKnown RBP21.79■■□□□ 1.08
SSH2-211ENST00000590153 MYH14Q7Z406 1995 aaKnown RBP21.78■■□□□ 1.08
SSH2-211ENST00000590153 NEFMP07197 916 aa21.78■■□□□ 1.08
SSH2-211ENST00000590153 TEFQ10587 303 aa21.78■■□□□ 1.08
SSH2-211ENST00000590153 RBM42Q9BTD8 480 aaKnown RBP21.78■■□□□ 1.08
SSH2-211ENST00000590153 UBR2Q8IWV8 1755 aa21.78■■□□□ 1.08
SSH2-211ENST00000590153 PNPLA7Q6ZV29 1317 aa21.78■■□□□ 1.08
SSH2-211ENST00000590153 C4BP0C0L5 1744 aa21.77■■□□□ 1.08
SSH2-211ENST00000590153 CICQ96RK0 1608 aaPredicted RBP21.77■■□□□ 1.08
SSH2-211ENST00000590153 KCPQ6ZWJ8 1503 aa21.77■■□□□ 1.08
SSH2-211ENST00000590153 PTCD1O75127 700 aaKnown RBP21.77■■□□□ 1.08
SSH2-211ENST00000590153 RC3H1Q5TC82 1133 aaKnown RBP21.77■■□□□ 1.08
SSH2-211ENST00000590153 AMIGO3Q86WK7 504 aa21.77■■□□□ 1.08
SSH2-211ENST00000590153 RTF1Q92541 710 aaKnown RBP21.77■■□□□ 1.08
SSH2-211ENST00000590153 COL5A3P25940 1745 aaPredicted RBP21.76■■□□□ 1.07
SSH2-211ENST00000590153 ZNF790Q6PG37 636 aa21.76■■□□□ 1.07
SSH2-211ENST00000590153 CCDC146Q8IYE0 955 aa21.76■■□□□ 1.07
SSH2-211ENST00000590153 MAPK8IP3Q9UPT6 1336 aa21.76■■□□□ 1.07
SSH2-211ENST00000590153 UBR3Q6ZT12 1888 aa21.75■■□□□ 1.07
SSH2-211ENST00000590153 KCNQ3O43525 872 aa21.75■■□□□ 1.07
SSH2-211ENST00000590153 RIPK4P57078 832 aa21.75■■□□□ 1.07
SSH2-211ENST00000590153 TFCP2L1Q9NZI6 479 aa21.75■■□□□ 1.07
SSH2-211ENST00000590153 TAF7Q15545 349 aaPredicted RBP21.74■■□□□ 1.07
SSH2-211ENST00000590153 COL23A1Q86Y22 540 aaPredicted RBP21.74■■□□□ 1.07
SSH2-211ENST00000590153 VSIG10Q8N0Z9 540 aa21.74■■□□□ 1.07
SSH2-211ENST00000590153 TJP1Q07157 1748 aa21.74■■□□□ 1.07
SSH2-211ENST00000590153 PTGER2P43116 358 aa21.73■■□□□ 1.07
SSH2-211ENST00000590153 ZNF496Q96IT1 587 aaPredicted RBP21.73■■□□□ 1.07
SSH2-211ENST00000590153 TRIM35Q9UPQ4 493 aa21.73■■□□□ 1.07
SSH2-211ENST00000590153 BTBD11A6QL63 1104 aa21.72■■□□□ 1.07
SSH2-211ENST00000590153 SLC16A10Q8TF71 515 aa21.72■■□□□ 1.07
SSH2-211ENST00000590153 SGIP1Q9BQI5 828 aa21.72■■□□□ 1.07
SSH2-211ENST00000590153 SPON1Q9HCB6 807 aa21.72■■□□□ 1.07
SSH2-211ENST00000590153 MRS2Q9HD23 443 aa21.72■■□□□ 1.07
SSH2-211ENST00000590153 ZBTB7AO95365 584 aa21.71■■□□□ 1.07
SSH2-211ENST00000590153 DNAJC10Q8IXB1 793 aa21.71■■□□□ 1.07
SSH2-211ENST00000590153 THUMPD2Q9BTF0 503 aaKnown RBP21.71■■□□□ 1.07
SSH2-211ENST00000590153 CNTNAP4Q9C0A0 1308 aa21.71■■□□□ 1.07
SSH2-211ENST00000590153 CYP19A1P11511 503 aaPredicted RBP21.7■■□□□ 1.06
SSH2-211ENST00000590153 INTS5Q6P9B9 1019 aaKnown RBP21.7■■□□□ 1.06
SSH2-211ENST00000590153 SMIM5Q71RC9 77 aa21.7■■□□□ 1.06
SSH2-211ENST00000590153 FLAD1Q8NFF5 587 aa21.7■■□□□ 1.06
SSH2-211ENST00000590153 RPS6KA4O75676 772 aa21.69■■□□□ 1.06
SSH2-211ENST00000590153 RRP7AQ9Y3A4 280 aaKnown RBP21.69■■□□□ 1.06
SSH2-211ENST00000590153 HEG1Q9ULI3 1381 aa21.69■■□□□ 1.06
SSH2-211ENST00000590153 APAF1O14727 1248 aa21.68■■□□□ 1.06
SSH2-211ENST00000590153 SSFA2P28290 1259 aa21.68■■□□□ 1.06
SSH2-211ENST00000590153 AK7Q96M32 723 aa21.68■■□□□ 1.06
SSH2-211ENST00000590153 MTFR1LQ9H019 292 aa21.68■■□□□ 1.06
SSH2-211ENST00000590153 CRKLP46109 303 aaKnown RBP21.67■■□□□ 1.06
SSH2-211ENST00000590153 TTC5Q8N0Z6 440 aa21.67■■□□□ 1.06
SSH2-211ENST00000590153 MIS18AQ9NYP9 233 aa21.67■■□□□ 1.06
SSH2-211ENST00000590153 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.66■■□□□ 1.06
SSH2-211ENST00000590153 FMNL2Q96PY5 1086 aa21.66■■□□□ 1.06
SSH2-211ENST00000590153 ATF5Q9Y2D1 282 aaPredicted RBP21.66■■□□□ 1.06
SSH2-211ENST00000590153 GNPATO15228 680 aa21.65■■□□□ 1.06
SSH2-211ENST00000590153 LMOD3Q0VAK6 560 aa21.65■■□□□ 1.06
SSH2-211ENST00000590153 NEUROD2Q15784 382 aa21.65■■□□□ 1.06
SSH2-211ENST00000590153 TEX13AQ9BXU3 409 aaPredicted RBP21.65■■□□□ 1.06
SSH2-211ENST00000590153 BABAM1Q9NWV8 329 aa21.65■■□□□ 1.06
SSH2-211ENST00000590153 KDM3BQ7LBC6 1761 aa21.65■■□□□ 1.06
SSH2-211ENST00000590153 NCBP3Q53F19 620 aaKnown RBP21.64■■□□□ 1.05
SSH2-211ENST00000590153 RTCBQ9Y3I0 505 aaKnown RBP21.64■■□□□ 1.05
SSH2-211ENST00000590153 ARHGEF1Q92888 912 aaKnown RBP21.63■■□□□ 1.05
SSH2-211ENST00000590153 USP16Q9Y5T5 823 aa21.63■■□□□ 1.05
SSH2-211ENST00000590153 CHL1O00533 1208 aa21.62■■□□□ 1.05
SSH2-211ENST00000590153 ADRA2BP18089 450 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms