RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 BRPF1P55201 1214 aaPredicted RBP13.57□□□□□ -0.24
NEDD4L-224ENST00000588712 CABP4P57796 275 aa13.57□□□□□ -0.24
NEDD4L-224ENST00000588712 FKBP8Q14318 412 aa13.57□□□□□ -0.24
NEDD4L-224ENST00000588712 SCN11AQ9UI33 1791 aa13.57□□□□□ -0.24
NEDD4L-224ENST00000588712 CANXP27824 592 aaKnown RBP13.57□□□□□ -0.24
NEDD4L-224ENST00000588712 DDB1Q16531 1140 aa13.57□□□□□ -0.24
NEDD4L-224ENST00000588712 FBXO41Q8TF61 875 aa13.57□□□□□ -0.24
NEDD4L-224ENST00000588712 C8orf58Q8NAV2 365 aa13.56□□□□□ -0.24
NEDD4L-224ENST00000588712 SMC4Q9NTJ3 1288 aa13.56□□□□□ -0.24
NEDD4L-224ENST00000588712 MIS18AQ9NYP9 233 aa13.56□□□□□ -0.24
NEDD4L-224ENST00000588712 TRPC5Q9UL62 973 aaPredicted RBP13.56□□□□□ -0.24
NEDD4L-224ENST00000588712 KIF16BQ96L93 1317 aa13.56□□□□□ -0.24
NEDD4L-224ENST00000588712 KDM6AO15550 1401 aaPredicted RBP13.56□□□□□ -0.24
NEDD4L-224ENST00000588712 PDE3AQ14432 1141 aa13.55□□□□□ -0.24
NEDD4L-224ENST00000588712 VIRMAQ69YN4 1812 aaKnown RBP13.55□□□□□ -0.24
NEDD4L-224ENST00000588712 WNK3Q9BYP7 1800 aa13.55□□□□□ -0.24
NEDD4L-224ENST00000588712 MRC1P22897 1456 aa13.55□□□□□ -0.24
NEDD4L-224ENST00000588712 BCAR3O75815 825 aa13.55□□□□□ -0.24
NEDD4L-224ENST00000588712 NFATC2IPQ8NCF5 419 aa13.55□□□□□ -0.24
NEDD4L-224ENST00000588712 TNS2Q63HR2 1409 aa13.55□□□□□ -0.24
NEDD4L-224ENST00000588712 AFF2P51816 1311 aa13.55□□□□□ -0.24
NEDD4L-224ENST00000588712 SSH1Q8WYL5 1049 aa13.54□□□□□ -0.24
NEDD4L-224ENST00000588712 EIF4A1P60842 406 aaKnown RBP13.54□□□□□ -0.24
NEDD4L-224ENST00000588712 CCDC30Q5VVM6 783 aa13.54□□□□□ -0.24
NEDD4L-224ENST00000588712 ZKSCAN2Q63HK3 967 aa13.54□□□□□ -0.24
NEDD4L-224ENST00000588712 TTC5Q8N0Z6 440 aa13.54□□□□□ -0.24
NEDD4L-224ENST00000588712 TSPYL6Q8N831 410 aa13.54□□□□□ -0.24
NEDD4L-224ENST00000588712 ARHGAP45Q92619 1136 aa13.54□□□□□ -0.24
NEDD4L-224ENST00000588712 GJD4Q96KN9 370 aaPredicted RBP13.54□□□□□ -0.24
NEDD4L-224ENST00000588712 ELL2O00472 640 aaPredicted RBP13.53□□□□□ -0.24
NEDD4L-224ENST00000588712 ZNF790Q6PG37 636 aa13.53□□□□□ -0.24
NEDD4L-224ENST00000588712 SIPA1L3O60292 1781 aaPredicted RBP13.53□□□□□ -0.24
NEDD4L-224ENST00000588712 STK31Q9BXU1 1019 aa13.52□□□□□ -0.24
NEDD4L-224ENST00000588712 KDM3BQ7LBC6 1761 aa13.52□□□□□ -0.24
NEDD4L-224ENST00000588712 SHANK3Q9BYB0 1731 aa13.52□□□□□ -0.25
NEDD4L-224ENST00000588712 ZNF772Q68DY9 489 aaPredicted RBP13.52□□□□□ -0.25
NEDD4L-224ENST00000588712 FRAT1Q92837 279 aaPredicted RBP13.52□□□□□ -0.25
NEDD4L-224ENST00000588712 AAMPQ13685 434 aa13.51□□□□□ -0.25
NEDD4L-224ENST00000588712 TMOD3Q9NYL9 352 aa13.51□□□□□ -0.25
NEDD4L-224ENST00000588712 ONECUT3O60422 494 aaPredicted RBP13.51□□□□□ -0.25
NEDD4L-224ENST00000588712 FAM98CQ17RN3 349 aaKnown RBP13.51□□□□□ -0.25
NEDD4L-224ENST00000588712 FMNL2Q96PY5 1086 aa13.51□□□□□ -0.25
NEDD4L-224ENST00000588712 ATRNO75882 1429 aa13.5□□□□□ -0.25
NEDD4L-224ENST00000588712 PLIN1O60240 522 aa13.5□□□□□ -0.25
NEDD4L-224ENST00000588712 MRPL50Q8N5N7 158 aaKnown RBP13.5□□□□□ -0.25
NEDD4L-224ENST00000588712 HEG1Q9ULI3 1381 aa13.5□□□□□ -0.25
NEDD4L-224ENST00000588712 ATF7IPQ6VMQ6 1270 aa13.49□□□□□ -0.25
NEDD4L-224ENST00000588712 BCL2L13Q9BXK5 485 aa13.49□□□□□ -0.25
NEDD4L-224ENST00000588712 API5Q9BZZ5 524 aaKnown RBP13.49□□□□□ -0.25
NEDD4L-224ENST00000588712 QTRT2Q9H974 415 aaKnown RBP13.49□□□□□ -0.25
NEDD4L-224ENST00000588712 NOB1Q9ULX3 412 aaKnown RBP13.49□□□□□ -0.25
NEDD4L-224ENST00000588712 GIGYF1O75420 1035 aaPredicted RBP13.49□□□□□ -0.25
NEDD4L-224ENST00000588712 FTSJ3Q8IY81 847 aaKnown RBP13.49□□□□□ -0.25
NEDD4L-224ENST00000588712 CHMP4BQ9H444 224 aaKnown RBP13.49□□□□□ -0.25
NEDD4L-224ENST00000588712 PTPRCP08575 1304 aa13.49□□□□□ -0.25
NEDD4L-224ENST00000588712 CACNA1FO60840 1977 aa13.48□□□□□ -0.25
NEDD4L-224ENST00000588712 SNRPA1P09661 255 aaKnown RBP13.48□□□□□ -0.25
NEDD4L-224ENST00000588712 IRX6P78412 446 aaPredicted RBP13.48□□□□□ -0.25
NEDD4L-224ENST00000588712 KRT24Q2M2I5 525 aa13.48□□□□□ -0.25
NEDD4L-224ENST00000588712 HDGFL1Q5TGJ6 251 aa13.48□□□□□ -0.25
NEDD4L-224ENST00000588712 DZIP1LQ8IYY4 767 aaKnown RBP13.48□□□□□ -0.25
NEDD4L-224ENST00000588712 PPP4R2Q9NY27 417 aa13.48□□□□□ -0.25
NEDD4L-224ENST00000588712 A0A0G2JS52 829 aa13.48□□□□□ -0.25
NEDD4L-224ENST00000588712 SLC4A2P04920 1241 aa13.48□□□□□ -0.25
NEDD4L-224ENST00000588712 BCL11AQ9H165 835 aa13.48□□□□□ -0.25
NEDD4L-224ENST00000588712 MARCH10Q8NA82 808 aaPredicted RBP13.47□□□□□ -0.25
NEDD4L-224ENST00000588712 TEX13AQ9BXU3 409 aaPredicted RBP13.47□□□□□ -0.25
NEDD4L-224ENST00000588712 KCNQ3O43525 872 aa13.46□□□□□ -0.25
NEDD4L-224ENST00000588712 SLC39A6Q13433 755 aa13.46□□□□□ -0.25
NEDD4L-224ENST00000588712 DBF4Q9UBU7 674 aaPredicted RBP13.46□□□□□ -0.25
NEDD4L-224ENST00000588712 VSIG10Q8N0Z9 540 aa13.46□□□□□ -0.26
NEDD4L-224ENST00000588712 PIGBQ92521 554 aa13.45□□□□□ -0.26
NEDD4L-224ENST00000588712 ZNF496Q96IT1 587 aaPredicted RBP13.45□□□□□ -0.26
NEDD4L-224ENST00000588712 BCL9O00512 1426 aa13.45□□□□□ -0.26
NEDD4L-224ENST00000588712 THSD7AQ9UPZ6 1657 aa13.45□□□□□ -0.26
NEDD4L-224ENST00000588712 TRIM27P14373 513 aa13.44□□□□□ -0.26
NEDD4L-224ENST00000588712 EIF2S2P20042 333 aaKnown RBP13.44□□□□□ -0.26
NEDD4L-224ENST00000588712 GLI3P10071 1580 aa13.44□□□□□ -0.26
NEDD4L-224ENST00000588712 HYPKQ9NX55 129 aa13.44□□□□□ -0.26
NEDD4L-224ENST00000588712 ERBB4Q15303 1308 aa13.43□□□□□ -0.26
NEDD4L-224ENST00000588712 PRIM1P49642 420 aaKnown RBP13.43□□□□□ -0.26
NEDD4L-224ENST00000588712 RBM6P78332 1123 aaKnown RBP13.43□□□□□ -0.26
NEDD4L-224ENST00000588712 C20orf194Q5TEA3 1177 aa13.43□□□□□ -0.26
NEDD4L-224ENST00000588712 ERICH6Q7L0X2 663 aa13.43□□□□□ -0.26
NEDD4L-224ENST00000588712 SMARCC1Q92922 1105 aaPredicted RBP13.43□□□□□ -0.26
NEDD4L-224ENST00000588712 SYTL4Q96C24 671 aaPredicted RBP13.43□□□□□ -0.26
NEDD4L-224ENST00000588712 CRBNQ96SW2 442 aa13.43□□□□□ -0.26
NEDD4L-224ENST00000588712 DDX19BQ9UMR2 479 aa13.43□□□□□ -0.26
NEDD4L-224ENST00000588712 EXOC6Q8TAG9 804 aa13.43□□□□□ -0.26
NEDD4L-224ENST00000588712 ITGB4P16144 1822 aa13.42□□□□□ -0.26
NEDD4L-224ENST00000588712 TOGARAM1Q9Y4F4 1720 aa13.42□□□□□ -0.26
NEDD4L-224ENST00000588712 TCERG1O14776 1098 aaKnown RBP13.42□□□□□ -0.26
NEDD4L-224ENST00000588712 MVPQ14764 893 aaKnown RBP13.42□□□□□ -0.26
NEDD4L-224ENST00000588712 SEPT12Q8IYM1 358 aa13.42□□□□□ -0.26
NEDD4L-224ENST00000588712 PAPPAQ13219 1627 aa13.42□□□□□ -0.26
NEDD4L-224ENST00000588712 FLIIQ13045 1269 aa13.41□□□□□ -0.26
NEDD4L-224ENST00000588712 PANK1Q8TE04 598 aa13.41□□□□□ -0.26
NEDD4L-224ENST00000588712 CLUAP1Q96AJ1 413 aa13.41□□□□□ -0.26
NEDD4L-224ENST00000588712 DDX21Q9NR30 783 aaKnown RBP eCLIP13.41□□□□□ -0.26
NEDD4L-224ENST00000588712 ATG3Q9NT62 314 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms