RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 C8orf58Q8NAV2 365 aa18.14■□□□□ 0.49
NLE1-205ENST00000588642 SUPT16HQ9Y5B9 1047 aaKnown RBP18.13■□□□□ 0.49
NLE1-205ENST00000588642 GLI3P10071 1580 aa18.13■□□□□ 0.49
NLE1-205ENST00000588642 KCNQ3O43525 872 aa18.12■□□□□ 0.49
NLE1-205ENST00000588642 TSPYL6Q8N831 410 aa18.12■□□□□ 0.49
NLE1-205ENST00000588642 TMOD3Q9NYL9 352 aa18.12■□□□□ 0.49
NLE1-205ENST00000588642 RXRBP28702 533 aa18.11■□□□□ 0.49
NLE1-205ENST00000588642 SLC39A6Q13433 755 aa18.11■□□□□ 0.49
NLE1-205ENST00000588642 KRT24Q2M2I5 525 aa18.11■□□□□ 0.49
NLE1-205ENST00000588642 TWISTNBQ3B726 338 aaPredicted RBP18.11■□□□□ 0.49
NLE1-205ENST00000588642 SYTL4Q96C24 671 aaPredicted RBP18.11■□□□□ 0.49
NLE1-205ENST00000588642 LRRC37A3O60309 1634 aa18.1■□□□□ 0.49
NLE1-205ENST00000588642 PRIM1P49642 420 aaKnown RBP18.1■□□□□ 0.49
NLE1-205ENST00000588642 EIF4A1P60842 406 aaKnown RBP18.1■□□□□ 0.49
NLE1-205ENST00000588642 TTC5Q8N0Z6 440 aa18.1■□□□□ 0.49
NLE1-205ENST00000588642 VAMP4O75379 141 aa18.09■□□□□ 0.49
NLE1-205ENST00000588642 RARSP54136 660 aaKnown RBP18.09■□□□□ 0.49
NLE1-205ENST00000588642 ZNF790Q6PG37 636 aa18.09■□□□□ 0.49
NLE1-205ENST00000588642 ACSBG1Q96GR2 724 aa18.09■□□□□ 0.49
NLE1-205ENST00000588642 RGS17Q9UGC6 210 aaPredicted RBP18.09■□□□□ 0.49
NLE1-205ENST00000588642 WNK3Q9BYP7 1800 aa18.08■□□□□ 0.48
NLE1-205ENST00000588642 PIGBQ92521 554 aa18.08■□□□□ 0.48
NLE1-205ENST00000588642 ADAMTS7Q9UKP4 1686 aa18.08■□□□□ 0.48
NLE1-205ENST00000588642 SHANK3Q9BYB0 1731 aa18.07■□□□□ 0.48
NLE1-205ENST00000588642 POTEAQ6S8J7 498 aa18.07■□□□□ 0.48
NLE1-205ENST00000588642 ZNF428Q96B54 188 aa18.07■□□□□ 0.48
NLE1-205ENST00000588642 MRC1P22897 1456 aa18.07■□□□□ 0.48
NLE1-205ENST00000588642 BCAR3O75815 825 aa18.06■□□□□ 0.48
NLE1-205ENST00000588642 FAM182BQ5T319 152 aa18.06■□□□□ 0.48
NLE1-205ENST00000588642 THSD7AQ9UPZ6 1657 aa18.06■□□□□ 0.48
NLE1-205ENST00000588642 KRT27Q7Z3Y8 459 aa18.05■□□□□ 0.48
NLE1-205ENST00000588642 SSH1Q8WYL5 1049 aa18.05■□□□□ 0.48
NLE1-205ENST00000588642 FMNL2Q96PY5 1086 aa18.05■□□□□ 0.48
NLE1-205ENST00000588642 SMC4Q9NTJ3 1288 aa18.05■□□□□ 0.48
NLE1-205ENST00000588642 SCN11AQ9UI33 1791 aa18.04■□□□□ 0.48
NLE1-205ENST00000588642 SOS1Q07889 1333 aaPredicted RBP18.04■□□□□ 0.48
NLE1-205ENST00000588642 TCERG1O14776 1098 aaKnown RBP18.04■□□□□ 0.48
NLE1-205ENST00000588642 ALDH1L2Q3SY69 923 aa18.04■□□□□ 0.48
NLE1-205ENST00000588642 ZNF496Q96IT1 587 aaPredicted RBP18.04■□□□□ 0.48
NLE1-205ENST00000588642 BCL2L13Q9BXK5 485 aa18.04■□□□□ 0.48
NLE1-205ENST00000588642 GIGYF1O75420 1035 aaPredicted RBP18.03■□□□□ 0.48
NLE1-205ENST00000588642 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.03■□□□□ 0.48
NLE1-205ENST00000588642 CHMP4AQ9BY43 222 aa18.03■□□□□ 0.48
NLE1-205ENST00000588642 ATG3Q9NT62 314 aa18.03■□□□□ 0.48
NLE1-205ENST00000588642 ASAP1Q9ULH1 1129 aa18.03■□□□□ 0.48
NLE1-205ENST00000588642 BCL9O00512 1426 aa18.03■□□□□ 0.48
NLE1-205ENST00000588642 KCNQ2O43526 872 aa18.02■□□□□ 0.48
NLE1-205ENST00000588642 PTCD1O75127 700 aaKnown RBP18.02■□□□□ 0.48
NLE1-205ENST00000588642 NEFLP07196 543 aa18.02■□□□□ 0.48
NLE1-205ENST00000588642 HOXB7P09629 217 aa18.02■□□□□ 0.48
NLE1-205ENST00000588642 EIF2S2P20042 333 aaKnown RBP18.02■□□□□ 0.48
NLE1-205ENST00000588642 RRP1P56182 461 aaKnown RBP18.02■□□□□ 0.48
NLE1-205ENST00000588642 NECTIN2Q92692 538 aa18.02■□□□□ 0.48
NLE1-205ENST00000588642 SNRPA1P09661 255 aaKnown RBP18.01■□□□□ 0.47
NLE1-205ENST00000588642 CANXP27824 592 aaKnown RBP18.01■□□□□ 0.47
NLE1-205ENST00000588642 HDGFL1Q5TGJ6 251 aa18.01■□□□□ 0.47
NLE1-205ENST00000588642 CCDC30Q5VVM6 783 aa18.01■□□□□ 0.47
NLE1-205ENST00000588642 FRAT1Q92837 279 aaPredicted RBP18.01■□□□□ 0.47
NLE1-205ENST00000588642 RNF123Q5XPI4 1314 aa18■□□□□ 0.47
NLE1-205ENST00000588642 PLIN1O60240 522 aa18■□□□□ 0.47
NLE1-205ENST00000588642 FAM196AQ6ZSG2 479 aa18■□□□□ 0.47
NLE1-205ENST00000588642 MRPL50Q8N5N7 158 aaKnown RBP18■□□□□ 0.47
NLE1-205ENST00000588642 RBM42Q9BTD8 480 aaKnown RBP18■□□□□ 0.47
NLE1-205ENST00000588642 STK31Q9BXU1 1019 aa18■□□□□ 0.47
NLE1-205ENST00000588642 HEG1Q9ULI3 1381 aa18■□□□□ 0.47
NLE1-205ENST00000588642 PRAMEF22A3QJZ6 481 aa17.98■□□□□ 0.47
NLE1-205ENST00000588642 SLC4A2P04920 1241 aa17.98■□□□□ 0.47
NLE1-205ENST00000588642 SMARCC1Q92922 1105 aaPredicted RBP17.98■□□□□ 0.47
NLE1-205ENST00000588642 TOGARAM1Q9Y4F4 1720 aa17.98■□□□□ 0.47
NLE1-205ENST00000588642 SIPA1L3O60292 1781 aaPredicted RBP17.97■□□□□ 0.47
NLE1-205ENST00000588642 IRX6P78412 446 aaPredicted RBP17.97■□□□□ 0.47
NLE1-205ENST00000588642 NOB1Q9ULX3 412 aaKnown RBP17.97■□□□□ 0.47
NLE1-205ENST00000588642 KDM3BQ7LBC6 1761 aa17.96■□□□□ 0.47
NLE1-205ENST00000588642 IPO8O15397 1037 aaKnown RBP17.96■□□□□ 0.47
NLE1-205ENST00000588642 BRPF1P55201 1214 aaPredicted RBP17.96■□□□□ 0.47
NLE1-205ENST00000588642 USP16Q9Y5T5 823 aa17.96■□□□□ 0.47
NLE1-205ENST00000588642 ZKSCAN2Q63HK3 967 aa17.95■□□□□ 0.46
NLE1-205ENST00000588642 PTF1AQ7RTS3 328 aa17.95■□□□□ 0.46
NLE1-205ENST00000588642 VSIG10Q8N0Z9 540 aa17.95■□□□□ 0.46
NLE1-205ENST00000588642 TEX13AQ9BXU3 409 aaPredicted RBP17.95■□□□□ 0.46
NLE1-205ENST00000588642 KIF16BQ96L93 1317 aa17.95■□□□□ 0.46
NLE1-205ENST00000588642 BCL11BQ9C0K0 894 aaPredicted RBP17.94■□□□□ 0.46
NLE1-205ENST00000588642 CHPF2Q9P2E5 772 aa17.94■□□□□ 0.46
NLE1-205ENST00000588642 DBF4Q9UBU7 674 aaPredicted RBP17.94■□□□□ 0.46
NLE1-205ENST00000588642 RGS12O14924 1447 aa17.94■□□□□ 0.46
NLE1-205ENST00000588642 VIRMAQ69YN4 1812 aaKnown RBP17.93■□□□□ 0.46
NLE1-205ENST00000588642 DOT1LQ8TEK3 1739 aa17.93■□□□□ 0.46
NLE1-205ENST00000588642 FKBP8Q14318 412 aa17.93■□□□□ 0.46
NLE1-205ENST00000588642 PALLDQ8WX93 1383 aa17.92■□□□□ 0.46
NLE1-205ENST00000588642 TRIM37O94972 964 aa17.92■□□□□ 0.46
NLE1-205ENST00000588642 STARD3NLO95772 234 aa17.92■□□□□ 0.46
NLE1-205ENST00000588642 MS4A1P11836 297 aa17.92■□□□□ 0.46
NLE1-205ENST00000588642 ATF7IPQ6VMQ6 1270 aa17.92■□□□□ 0.46
NLE1-205ENST00000588642 DNAJC10Q8IXB1 793 aa17.92■□□□□ 0.46
NLE1-205ENST00000588642 KCPQ6ZWJ8 1503 aa17.92■□□□□ 0.46
NLE1-205ENST00000588642 LOC102724428A0A0B4J2F2 783 aa17.91■□□□□ 0.46
NLE1-205ENST00000588642 SIK1P57059 783 aa17.91■□□□□ 0.46
NLE1-205ENST00000588642 C20orf194Q5TEA3 1177 aa17.91■□□□□ 0.46
NLE1-205ENST00000588642 G2E3Q7L622 706 aa17.91■□□□□ 0.46
NLE1-205ENST00000588642 ARHGAP45Q92619 1136 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms