RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 TOGARAM1Q9Y4F4 1720 aa23.19■■□□□ 1.3
RBFOX1-222ENST00000585867 KCNQ2O43526 872 aa23.18■■□□□ 1.3
RBFOX1-222ENST00000585867 ILDR2Q71H61 639 aa23.18■■□□□ 1.3
RBFOX1-222ENST00000585867 CEMIPQ8WUJ3 1361 aa23.18■■□□□ 1.3
RBFOX1-222ENST00000585867 TEFQ10587 303 aa23.17■■□□□ 1.3
RBFOX1-222ENST00000585867 NFATC2IPQ8NCF5 419 aa23.17■■□□□ 1.3
RBFOX1-222ENST00000585867 MYH16Q9H6N6 1097 aa23.17■■□□□ 1.3
RBFOX1-222ENST00000585867 SLC52A2Q9HAB3 445 aa23.17■■□□□ 1.3
RBFOX1-222ENST00000585867 SUPT16HQ9Y5B9 1047 aaKnown RBP23.17■■□□□ 1.3
RBFOX1-222ENST00000585867 SBF2Q86WG5 1849 aa23.17■■□□□ 1.3
RBFOX1-222ENST00000585867 TRIM37O94972 964 aa23.16■■□□□ 1.3
RBFOX1-222ENST00000585867 TMOD3Q9NYL9 352 aa23.16■■□□□ 1.3
RBFOX1-222ENST00000585867 ITGB4P16144 1822 aa23.15■■□□□ 1.3
RBFOX1-222ENST00000585867 PTF1AQ7RTS3 328 aa23.14■■□□□ 1.3
RBFOX1-222ENST00000585867 RCAN3Q9UKA8 241 aa23.14■■□□□ 1.3
RBFOX1-222ENST00000585867 PIGBQ92521 554 aa23.14■■□□□ 1.29
RBFOX1-222ENST00000585867 BCL11BQ9C0K0 894 aaPredicted RBP23.14■■□□□ 1.29
RBFOX1-222ENST00000585867 NHSQ6T4R5 1651 aa23.13■■□□□ 1.29
RBFOX1-222ENST00000585867 MRC1P22897 1456 aa23.12■■□□□ 1.29
RBFOX1-222ENST00000585867 TAF7Q15545 349 aaPredicted RBP23.12■■□□□ 1.29
RBFOX1-222ENST00000585867 SPINK5Q9NQ38 1064 aaPredicted RBP23.12■■□□□ 1.29
RBFOX1-222ENST00000585867 RNF123Q5XPI4 1314 aa23.09■■□□□ 1.29
RBFOX1-222ENST00000585867 BTBD11A6QL63 1104 aa23.09■■□□□ 1.29
RBFOX1-222ENST00000585867 MIS18AQ9NYP9 233 aa23.09■■□□□ 1.29
RBFOX1-222ENST00000585867 LAS1LQ9Y4W2 734 aaKnown RBP23.09■■□□□ 1.29
RBFOX1-222ENST00000585867 SIPA1L3O60292 1781 aaPredicted RBP23.09■■□□□ 1.29
RBFOX1-222ENST00000585867 BTAF1O14981 1849 aa23.06■■□□□ 1.28
RBFOX1-222ENST00000585867 GNAI1P63096 354 aa23.06■■□□□ 1.28
RBFOX1-222ENST00000585867 SLC39A6Q13433 755 aa23.06■■□□□ 1.28
RBFOX1-222ENST00000585867 ATG3Q9NT62 314 aa23.06■■□□□ 1.28
RBFOX1-222ENST00000585867 ASAP1Q9ULH1 1129 aa23.06■■□□□ 1.28
RBFOX1-222ENST00000585867 APBA3O96018 575 aa23.06■■□□□ 1.28
RBFOX1-222ENST00000585867 CFAP44Q96MT7 982 aa23.06■■□□□ 1.28
RBFOX1-222ENST00000585867 IFT57Q9NWB7 429 aa23.06■■□□□ 1.28
RBFOX1-222ENST00000585867 CHL1O00533 1208 aa23.05■■□□□ 1.28
RBFOX1-222ENST00000585867 CT47B1P0C2W7 299 aaPredicted RBP23.05■■□□□ 1.28
RBFOX1-222ENST00000585867 TSPYL4Q9UJ04 414 aa23.05■■□□□ 1.28
RBFOX1-222ENST00000585867 FANCIQ9NVI1 1328 aa23.04■■□□□ 1.28
RBFOX1-222ENST00000585867 SF3B2Q13435 895 aaKnown RBP23.04■■□□□ 1.28
RBFOX1-222ENST00000585867 BABAM1Q9NWV8 329 aa23.04■■□□□ 1.28
RBFOX1-222ENST00000585867 KCNQ3O43525 872 aa23.03■■□□□ 1.28
RBFOX1-222ENST00000585867 ZNF853P0CG23 659 aa23.03■■□□□ 1.28
RBFOX1-222ENST00000585867 FKBP8Q14318 412 aa23.03■■□□□ 1.28
RBFOX1-222ENST00000585867 ZNF790Q6PG37 636 aa23.03■■□□□ 1.28
RBFOX1-222ENST00000585867 CCDC125Q86Z20 511 aa23.03■■□□□ 1.28
RBFOX1-222ENST00000585867 TTC5Q8N0Z6 440 aa23.03■■□□□ 1.28
RBFOX1-222ENST00000585867 SMARCC1Q92922 1105 aaPredicted RBP23.03■■□□□ 1.28
RBFOX1-222ENST00000585867 TNS1Q9HBL0 1735 aaKnown RBP23.02■■□□□ 1.28
RBFOX1-222ENST00000585867 ERICH6BQ5W0A0 696 aa23.01■■□□□ 1.27
RBFOX1-222ENST00000585867 UPF1Q92900 1129 aaKnown RBP eCLIP23.01■■□□□ 1.27
RBFOX1-222ENST00000585867 RRP1P56182 461 aaKnown RBP23.01■■□□□ 1.27
RBFOX1-222ENST00000585867 MBIPQ9NS73 344 aa23.01■■□□□ 1.27
RBFOX1-222ENST00000585867 PALLDQ8WX93 1383 aa23■■□□□ 1.27
RBFOX1-222ENST00000585867 PAPPAQ13219 1627 aa22.99■■□□□ 1.27
RBFOX1-222ENST00000585867 PLSCR1O15162 318 aa22.99■■□□□ 1.27
RBFOX1-222ENST00000585867 PTCD1O75127 700 aaKnown RBP22.99■■□□□ 1.27
RBFOX1-222ENST00000585867 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.99■■□□□ 1.27
RBFOX1-222ENST00000585867 RBM42Q9BTD8 480 aaKnown RBP22.99■■□□□ 1.27
RBFOX1-222ENST00000585867 EP400Q96L91 3159 aa22.99■■□□□ 1.27
RBFOX1-222ENST00000585867 KDM3BQ7LBC6 1761 aa22.99■■□□□ 1.27
RBFOX1-222ENST00000585867 TSR2Q969E8 191 aaKnown RBP22.98■■□□□ 1.27
RBFOX1-222ENST00000585867 BAG6P46379 1132 aa22.97■■□□□ 1.27
RBFOX1-222ENST00000585867 ZNF496Q96IT1 587 aaPredicted RBP22.97■■□□□ 1.27
RBFOX1-222ENST00000585867 EIF4A1P60842 406 aaKnown RBP22.97■■□□□ 1.27
RBFOX1-222ENST00000585867 FMNL2Q96PY5 1086 aa22.97■■□□□ 1.27
RBFOX1-222ENST00000585867 EN1Q05925 392 aaPredicted RBP22.96■■□□□ 1.27
RBFOX1-222ENST00000585867 KCPQ6ZWJ8 1503 aa22.95■■□□□ 1.26
RBFOX1-222ENST00000585867 LOC102724428A0A0B4J2F2 783 aa22.95■■□□□ 1.26
RBFOX1-222ENST00000585867 SIK1P57059 783 aa22.95■■□□□ 1.26
RBFOX1-222ENST00000585867 EXOSC9Q06265 439 aaKnown RBP22.95■■□□□ 1.26
RBFOX1-222ENST00000585867 DEFB132Q7Z7B7 95 aa22.95■■□□□ 1.26
RBFOX1-222ENST00000585867 UBR2Q8IWV8 1755 aa22.95■■□□□ 1.26
RBFOX1-222ENST00000585867 ZNF428Q96B54 188 aa22.94■■□□□ 1.26
RBFOX1-222ENST00000585867 LY75O60449 1722 aa22.93■■□□□ 1.26
RBFOX1-222ENST00000585867 TXNRD1Q16881 649 aa22.93■■□□□ 1.26
RBFOX1-222ENST00000585867 SLC4A9Q96Q91 983 aa22.93■■□□□ 1.26
RBFOX1-222ENST00000585867 ATP6V1AP38606 617 aa22.93■■□□□ 1.26
RBFOX1-222ENST00000585867 PROM2Q8N271 834 aa22.93■■□□□ 1.26
RBFOX1-222ENST00000585867 CAMKK2Q96RR4 588 aa22.93■■□□□ 1.26
RBFOX1-222ENST00000585867 CCNL1Q9UK58 526 aaPredicted RBP22.93■■□□□ 1.26
RBFOX1-222ENST00000585867 HEG1Q9ULI3 1381 aa22.92■■□□□ 1.26
RBFOX1-222ENST00000585867 KCNQ4P56696 695 aa22.92■■□□□ 1.26
RBFOX1-222ENST00000585867 EZH2Q15910 746 aaKnown RBP22.92■■□□□ 1.26
RBFOX1-222ENST00000585867 KRT24Q2M2I5 525 aa22.91■■□□□ 1.26
RBFOX1-222ENST00000585867 VSIG10Q8N0Z9 540 aa22.91■■□□□ 1.26
RBFOX1-222ENST00000585867 SNRPA1P09661 255 aaKnown RBP22.9■■□□□ 1.26
RBFOX1-222ENST00000585867 RARSP54136 660 aaKnown RBP22.9■■□□□ 1.26
RBFOX1-222ENST00000585867 GIGYF1O75420 1035 aaPredicted RBP22.89■■□□□ 1.26
RBFOX1-222ENST00000585867 IRX6P78412 446 aaPredicted RBP22.89■■□□□ 1.26
RBFOX1-222ENST00000585867 SLC27A3Q5K4L6 730 aa22.89■■□□□ 1.26
RBFOX1-222ENST00000585867 LRRC4BQ9NT99 713 aa22.89■■□□□ 1.26
RBFOX1-222ENST00000585867 RGPD3A6NKT7 1758 aaPredicted RBP22.89■■□□□ 1.25
RBFOX1-222ENST00000585867 RGPD4Q7Z3J3 1758 aa22.89■■□□□ 1.25
RBFOX1-222ENST00000585867 PRAMEF22A3QJZ6 481 aa22.89■■□□□ 1.25
RBFOX1-222ENST00000585867 ELL2O00472 640 aaPredicted RBP22.89■■□□□ 1.25
RBFOX1-222ENST00000585867 ITPK1Q13572 414 aa22.89■■□□□ 1.25
RBFOX1-222ENST00000585867 DNAJC10Q8IXB1 793 aa22.89■■□□□ 1.25
RBFOX1-222ENST00000585867 C8orf58Q8NAV2 365 aa22.89■■□□□ 1.25
RBFOX1-222ENST00000585867 TEX13AQ9BXU3 409 aaPredicted RBP22.87■■□□□ 1.25
RBFOX1-222ENST00000585867 USP16Q9Y5T5 823 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms