RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 A0A1W2PP64 1363 aa12.39□□□□□ -0.43
CDK5RAP3-224ENST00000582275 LOC102724428A0A0B4J2F2 783 aa12.38□□□□□ -0.43
CDK5RAP3-224ENST00000582275 FCHSD2O94868 740 aa12.38□□□□□ -0.43
CDK5RAP3-224ENST00000582275 SIK1P57059 783 aa12.38□□□□□ -0.43
CDK5RAP3-224ENST00000582275 NBPF6Q5VWK0 638 aa12.38□□□□□ -0.43
CDK5RAP3-224ENST00000582275 C9orf131Q5VYM1 1079 aa12.38□□□□□ -0.43
CDK5RAP3-224ENST00000582275 NBPF4Q96M43 638 aa12.38□□□□□ -0.43
CDK5RAP3-224ENST00000582275 CCDC87Q9NVE4 849 aa12.38□□□□□ -0.43
CDK5RAP3-224ENST00000582275 KIF13BQ9NQT8 1826 aa12.37□□□□□ -0.43
CDK5RAP3-224ENST00000582275 GNPATO15228 680 aa12.37□□□□□ -0.43
CDK5RAP3-224ENST00000582275 HTRA3P83110 453 aa12.37□□□□□ -0.43
CDK5RAP3-224ENST00000582275 AMIGO3Q86WK7 504 aa12.37□□□□□ -0.43
CDK5RAP3-224ENST00000582275 TOGARAM1Q9Y4F4 1720 aa12.37□□□□□ -0.43
CDK5RAP3-224ENST00000582275 A0A0G2JLW4 131 aa12.36□□□□□ -0.43
CDK5RAP3-224ENST00000582275 TMF1P82094 1093 aa12.36□□□□□ -0.43
CDK5RAP3-224ENST00000582275 MKRN4PQ13434 485 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-224ENST00000582275 RGPD2P0DJD1 1756 aa12.35□□□□□ -0.43
CDK5RAP3-224ENST00000582275 SLC24A1O60721 1099 aa12.35□□□□□ -0.43
CDK5RAP3-224ENST00000582275 HSPA1AP0DMV8 641 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-224ENST00000582275 HSPA1BP0DMV9 641 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-224ENST00000582275 LINC00116Q8NCU8 138 aa12.35□□□□□ -0.43
CDK5RAP3-224ENST00000582275 PIGBQ92521 554 aa12.35□□□□□ -0.43
CDK5RAP3-224ENST00000582275 ZC3H4Q9UPT8 1303 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-224ENST00000582275 CYP27B1O15528 508 aa12.34□□□□□ -0.43
CDK5RAP3-224ENST00000582275 SLC34A2O95436 690 aa12.34□□□□□ -0.43
CDK5RAP3-224ENST00000582275 DPEP1P16444 411 aa12.34□□□□□ -0.43
CDK5RAP3-224ENST00000582275 TRAPPC3LQ5T215 181 aa12.34□□□□□ -0.43
CDK5RAP3-224ENST00000582275 USHBP1Q8N6Y0 703 aa12.34□□□□□ -0.43
CDK5RAP3-224ENST00000582275 PIM2Q9P1W9 311 aa12.34□□□□□ -0.43
CDK5RAP3-224ENST00000582275 RTCBQ9Y3I0 505 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-224ENST00000582275 PARP3Q9Y6F1 533 aa12.34□□□□□ -0.43
CDK5RAP3-224ENST00000582275 KIF24Q5T7B8 1368 aa12.33□□□□□ -0.44
CDK5RAP3-224ENST00000582275 ITGB4P16144 1822 aa12.33□□□□□ -0.44
CDK5RAP3-224ENST00000582275 ATP6V1AP38606 617 aa12.33□□□□□ -0.44
CDK5RAP3-224ENST00000582275 NKX1-1Q15270 411 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-224ENST00000582275 RRAGCQ9HB90 399 aa12.33□□□□□ -0.44
CDK5RAP3-224ENST00000582275 TMOD3Q9NYL9 352 aa12.33□□□□□ -0.44
CDK5RAP3-224ENST00000582275 RNF181Q9P0P0 153 aa12.33□□□□□ -0.44
CDK5RAP3-224ENST00000582275 SPG7Q9UQ90 795 aa12.33□□□□□ -0.44
CDK5RAP3-224ENST00000582275 N4BP2Q86UW6 1770 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-224ENST00000582275 TNRC6CQ9HCJ0 1690 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-224ENST00000582275 KCPQ6ZWJ8 1503 aa12.32□□□□□ -0.44
CDK5RAP3-224ENST00000582275 INSRP06213 1382 aa12.32□□□□□ -0.44
CDK5RAP3-224ENST00000582275 DALRD3Q5D0E6 543 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-224ENST00000582275 SMIM5Q71RC9 77 aa12.32□□□□□ -0.44
CDK5RAP3-224ENST00000582275 DCAF5Q96JK2 942 aa12.32□□□□□ -0.44
CDK5RAP3-224ENST00000582275 CARD11Q9BXL7 1154 aa12.32□□□□□ -0.44
CDK5RAP3-224ENST00000582275 ARFGEF1Q9Y6D6 1849 aa12.32□□□□□ -0.44
CDK5RAP3-224ENST00000582275 KIAA1551Q9HCM1 1747 aa12.31□□□□□ -0.44
CDK5RAP3-224ENST00000582275 RRS1Q15050 365 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-224ENST00000582275 MAP2P11137 1827 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-224ENST00000582275 PKD1L3Q7Z443 1732 aa12.31□□□□□ -0.44
CDK5RAP3-224ENST00000582275 FLT4P35916 1363 aa12.3□□□□□ -0.44
CDK5RAP3-224ENST00000582275 VEGFAP15692 232 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-224ENST00000582275 RFC4P35249 363 aa12.3□□□□□ -0.44
CDK5RAP3-224ENST00000582275 ITPK1Q13572 414 aa12.3□□□□□ -0.44
CDK5RAP3-224ENST00000582275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.3□□□□□ -0.443e-16■■□□□ 12.1
CDK5RAP3-224ENST00000582275 BRCA1P38398 1863 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-224ENST00000582275 FBLN1P23142 703 aa12.29□□□□□ -0.44
CDK5RAP3-224ENST00000582275 RC3H1Q5TC82 1133 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-224ENST00000582275 C4AP0C0L4 1744 aa12.28□□□□□ -0.44
CDK5RAP3-224ENST00000582275 GYS1P13807 737 aa12.28□□□□□ -0.44
CDK5RAP3-224ENST00000582275 KCNA3P22001 575 aa12.28□□□□□ -0.44
CDK5RAP3-224ENST00000582275 HSP90AB2PQ58FF8 381 aa12.28□□□□□ -0.44
CDK5RAP3-224ENST00000582275 PCDH10Q9P2E7 1040 aa12.28□□□□□ -0.44
CDK5RAP3-224ENST00000582275 ASAP1Q9ULH1 1129 aa12.28□□□□□ -0.44
CDK5RAP3-224ENST00000582275 RPS6KA4O75676 772 aa12.27□□□□□ -0.45
CDK5RAP3-224ENST00000582275 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-224ENST00000582275 CNTNAP4Q9C0A0 1308 aa12.27□□□□□ -0.45
CDK5RAP3-224ENST00000582275 GLTPD2A6NH11 291 aa12.26□□□□□ -0.45
CDK5RAP3-224ENST00000582275 FYB1O15117 783 aa12.26□□□□□ -0.45
CDK5RAP3-224ENST00000582275 IFNL2Q8IZJ0 200 aa12.26□□□□□ -0.45
CDK5RAP3-224ENST00000582275 PRDM10Q9NQV6 1147 aa12.26□□□□□ -0.45
CDK5RAP3-224ENST00000582275 ATG3Q9NT62 314 aa12.26□□□□□ -0.45
CDK5RAP3-224ENST00000582275 SBF1O95248 1867 aa12.24□□□□□ -0.45
CDK5RAP3-224ENST00000582275 LMNB1P20700 586 aa12.24□□□□□ -0.45
CDK5RAP3-224ENST00000582275 KDRP35968 1356 aa12.24□□□□□ -0.45
CDK5RAP3-224ENST00000582275 NEUROD1Q13562 356 aa12.24□□□□□ -0.45
CDK5RAP3-224ENST00000582275 NCAPD2Q15021 1401 aa12.24□□□□□ -0.45
CDK5RAP3-224ENST00000582275 ZNF831Q5JPB2 1677 aa12.24□□□□□ -0.45
CDK5RAP3-224ENST00000582275 GGNBP2Q9H3C7 697 aa12.24□□□□□ -0.45
CDK5RAP3-224ENST00000582275 CREBZFQ9NS37 354 aa12.24□□□□□ -0.45
CDK5RAP3-224ENST00000582275 TONSLQ96HA7 1378 aa12.23□□□□□ -0.45
CDK5RAP3-224ENST00000582275 ERVV-2B6SEH9 535 aa12.23□□□□□ -0.45
CDK5RAP3-224ENST00000582275 PHKG2P15735 406 aa12.23□□□□□ -0.45
CDK5RAP3-224ENST00000582275 DPY19L2Q6NUT2 758 aa12.23□□□□□ -0.45
CDK5RAP3-224ENST00000582275 SIN3AQ96ST3 1273 aa12.23□□□□□ -0.45
CDK5RAP3-224ENST00000582275 RBM42Q9BTD8 480 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-224ENST00000582275 KDM6AO15550 1401 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-224ENST00000582275 HSP90AB1P08238 724 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-224ENST00000582275 AIDAQ96BJ3 306 aa12.22□□□□□ -0.45
CDK5RAP3-224ENST00000582275 CTCFP49711 727 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-224ENST00000582275 PCNTO95613 3336 aa12.2□□□□□ -0.46
CDK5RAP3-224ENST00000582275 USP42Q9H9J4 1324 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-224ENST00000582275 CHRNA5P30532 468 aa12.2□□□□□ -0.46
CDK5RAP3-224ENST00000582275 TESK2Q96S53 571 aa12.2□□□□□ -0.46
CDK5RAP3-224ENST00000582275 RASSF7Q02833 373 aa12.19□□□□□ -0.46
CDK5RAP3-224ENST00000582275 WASHC2AQ641Q2 1341 aa12.18□□□□□ -0.46
CDK5RAP3-224ENST00000582275 FOXN1O15353 648 aa12.18□□□□□ -0.46
CDK5RAP3-224ENST00000582275 DDR1Q08345 913 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms