RNA–Protein interactions for RNA: ENST00000581523.5

MSI2-213, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2

Gene MSI2, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-213ENST00000581523 SLC6A16Q9GZN6 736 aa6.91□□□□□ -1.3
MSI2-213ENST00000581523 IL21Q9HBE4 155 aa6.91□□□□□ -1.3
MSI2-213ENST00000581523 GNEQ9Y223 722 aaKnown RBP6.91□□□□□ -1.3
MSI2-213ENST00000581523 CASKIN1Q8WXD9 1431 aa6.91□□□□□ -1.3
MSI2-213ENST00000581523 C3P01024 1663 aa6.9□□□□□ -1.3
MSI2-213ENST00000581523 KIDINS220Q9ULH0 1771 aa6.9□□□□□ -1.3
MSI2-213ENST00000581523 PTK7Q13308 1070 aa6.9□□□□□ -1.3
MSI2-213ENST00000581523 CRTC2Q53ET0 693 aaPredicted RBP6.9□□□□□ -1.3
MSI2-213ENST00000581523 LARP1Q6PKG0 1096 aaKnown RBP6.9□□□□□ -1.3
MSI2-213ENST00000581523 TRAF7Q6Q0C0 670 aa6.9□□□□□ -1.3
MSI2-213ENST00000581523 CCDC24Q8N4L8 307 aa6.9□□□□□ -1.3
MSI2-213ENST00000581523 ATP10AO60312 1499 aa6.9□□□□□ -1.31
MSI2-213ENST00000581523 USP17L15C9J2P7 530 aa6.89□□□□□ -1.31
MSI2-213ENST00000581523 USP17L10C9JJH3 530 aa6.89□□□□□ -1.31
MSI2-213ENST00000581523 USP17L13C9JLJ4 530 aa6.89□□□□□ -1.31
MSI2-213ENST00000581523 USP17L12C9JPN9 530 aa6.89□□□□□ -1.31
MSI2-213ENST00000581523 USP17L11C9JVI0 530 aa6.89□□□□□ -1.31
MSI2-213ENST00000581523 USP17L21D6R901 530 aa6.89□□□□□ -1.31
MSI2-213ENST00000581523 USP17L18D6R9N7 530 aa6.89□□□□□ -1.31
MSI2-213ENST00000581523 USP17L22D6RA61 530 aa6.89□□□□□ -1.31
MSI2-213ENST00000581523 USP17L17D6RBQ6 530 aa6.89□□□□□ -1.31
MSI2-213ENST00000581523 USP17L19D6RCP7 530 aa6.89□□□□□ -1.31
MSI2-213ENST00000581523 USP17L20D6RJB6 530 aa6.89□□□□□ -1.31
MSI2-213ENST00000581523 RASA1P20936 1047 aa6.89□□□□□ -1.31
MSI2-213ENST00000581523 USP17L24Q0WX57 530 aa6.89□□□□□ -1.31
MSI2-213ENST00000581523 CDCA7Q9BWT1 371 aaPredicted RBP6.89□□□□□ -1.31
MSI2-213ENST00000581523 IVNS1ABPQ9Y6Y0 642 aa6.89□□□□□ -1.31
MSI2-213ENST00000581523 TRAPPC8Q9Y2L5 1435 aa6.89□□□□□ -1.31
MSI2-213ENST00000581523 SUPT6HQ7KZ85 1726 aaKnown RBP6.89□□□□□ -1.31
MSI2-213ENST00000581523 REREQ9P2R6 1566 aa6.88□□□□□ -1.31
MSI2-213ENST00000581523 EML3Q32P44 896 aa6.88□□□□□ -1.31
MSI2-213ENST00000581523 EFCAB2Q5VUJ9 269 aa6.88□□□□□ -1.31
MSI2-213ENST00000581523 BPHLQ86WA6 291 aaPredicted RBP6.88□□□□□ -1.31
MSI2-213ENST00000581523 DZIP3Q86Y13 1208 aaKnown RBP6.88□□□□□ -1.31
MSI2-213ENST00000581523 ZNF516Q92618 1163 aa6.88□□□□□ -1.31
MSI2-213ENST00000581523 CDK11AQ9UQ88 783 aaPredicted RBP6.88□□□□□ -1.31
MSI2-213ENST00000581523 TIAM1Q13009 1591 aa6.87□□□□□ -1.31
MSI2-213ENST00000581523 INO80Q9ULG1 1556 aaPredicted RBP6.87□□□□□ -1.31
MSI2-213ENST00000581523 CEBPAP49715 358 aaPredicted RBP6.87□□□□□ -1.31
MSI2-213ENST00000581523 TSGA10IPQ3SY00 556 aa6.87□□□□□ -1.31
MSI2-213ENST00000581523 PHLDB3Q6NSJ2 640 aa6.87□□□□□ -1.31
MSI2-213ENST00000581523 SND1Q7KZF4 910 aaKnown RBP eCLIP6.87□□□□□ -1.31
MSI2-213ENST00000581523 TRIM50Q86XT4 487 aa6.87□□□□□ -1.31
MSI2-213ENST00000581523 ANKMY2Q8IV38 441 aa6.87□□□□□ -1.31
MSI2-213ENST00000581523 AFAP1Q8N556 730 aa6.87□□□□□ -1.31
MSI2-213ENST00000581523 FAM200AQ8TCP9 573 aa6.87□□□□□ -1.31
MSI2-213ENST00000581523 BAP1Q92560 729 aa6.87□□□□□ -1.31
MSI2-213ENST00000581523 MTMR7Q9Y216 660 aa6.87□□□□□ -1.31
MSI2-213ENST00000581523 CLTCQ00610 1675 aaKnown RBP6.87□□□□□ -1.31
MSI2-213ENST00000581523 ATP7AQ04656 1500 aa6.86□□□□□ -1.31
MSI2-213ENST00000581523 EHBP1L1Q8N3D4 1523 aa6.86□□□□□ -1.31
MSI2-213ENST00000581523 SSFA2P28290 1259 aa6.86□□□□□ -1.31
MSI2-213ENST00000581523 ERFEQ4G0M1 354 aa6.86□□□□□ -1.31
MSI2-213ENST00000581523 TXNDC2Q86VQ3 553 aa6.86□□□□□ -1.31
MSI2-213ENST00000581523 OGFOD1Q8N543 542 aa6.86□□□□□ -1.31
MSI2-213ENST00000581523 CLP1Q92989 425 aaKnown RBP6.86□□□□□ -1.31
MSI2-213ENST00000581523 CCDC85AQ96PX6 553 aaPredicted RBP6.86□□□□□ -1.31
MSI2-213ENST00000581523 NOD1Q9Y239 953 aa6.86□□□□□ -1.31
MSI2-213ENST00000581523 UHRF1BP1Q6BDS2 1440 aa6.85□□□□□ -1.31
MSI2-213ENST00000581523 STRCQ7RTU9 1775 aa6.85□□□□□ -1.31
MSI2-213ENST00000581523 MAGEB6P1A0A0J9YX57 407 aa6.85□□□□□ -1.31
MSI2-213ENST00000581523 GIGYF1O75420 1035 aaPredicted RBP6.85□□□□□ -1.31
MSI2-213ENST00000581523 ATP1A2P50993 1020 aa6.85□□□□□ -1.31
MSI2-213ENST00000581523 PTPN5P54829 565 aa6.85□□□□□ -1.31
MSI2-213ENST00000581523 CLDN10P78369 228 aa6.85□□□□□ -1.31
MSI2-213ENST00000581523 RNF20Q5VTR2 975 aa6.85□□□□□ -1.31
MSI2-213ENST00000581523 CCDC125Q86Z20 511 aa6.85□□□□□ -1.31
MSI2-213ENST00000581523 LARGE2Q8N3Y3 721 aa6.85□□□□□ -1.31
MSI2-213ENST00000581523 ZNF511Q8NB15 262 aa6.85□□□□□ -1.31
MSI2-213ENST00000581523 FOXJ1Q92949 421 aa6.85□□□□□ -1.31
MSI2-213ENST00000581523 C1QTNF2Q9BXJ5 285 aa6.85□□□□□ -1.31
MSI2-213ENST00000581523 CARD14Q9BXL6 1004 aa6.85□□□□□ -1.31
MSI2-213ENST00000581523 SLAIN2Q9P270 581 aa6.85□□□□□ -1.31
MSI2-213ENST00000581523 DOLKQ9UPQ8 538 aa6.85□□□□□ -1.31
MSI2-213ENST00000581523 MYO3AQ8NEV4 1616 aa6.85□□□□□ -1.31
MSI2-213ENST00000581523 MLH3Q9UHC1 1453 aa6.85□□□□□ -1.31
MSI2-213ENST00000581523 ADGBQ8N7X0 1667 aa6.84□□□□□ -1.31
MSI2-213ENST00000581523 PLXNC1O60486 1568 aa6.84□□□□□ -1.31
MSI2-213ENST00000581523 ZBTB7BO15156 539 aaPredicted RBP6.84□□□□□ -1.31
MSI2-213ENST00000581523 DKK1O94907 266 aa6.84□□□□□ -1.31
MSI2-213ENST00000581523 S1PR4O95977 384 aa6.84□□□□□ -1.31
MSI2-213ENST00000581523 DPYDQ12882 1025 aa6.84□□□□□ -1.31
MSI2-213ENST00000581523 SWI5Q1ZZU3 235 aa6.84□□□□□ -1.31
MSI2-213ENST00000581523 C4orf48Q5BLP8 95 aa6.84□□□□□ -1.31
MSI2-213ENST00000581523 NKX2-3Q8TAU0 364 aa6.84□□□□□ -1.31
MSI2-213ENST00000581523 CCER1Q8TC90 406 aaPredicted RBP6.84□□□□□ -1.31
MSI2-213ENST00000581523 DNAAF2Q9NVR5 837 aaKnown RBP6.84□□□□□ -1.31
MSI2-213ENST00000581523 FCF1Q9Y324 198 aaKnown RBP6.84□□□□□ -1.31
MSI2-213ENST00000581523 AGLP35573 1532 aa6.84□□□□□ -1.31
MSI2-213ENST00000581523 GPATCH8Q9UKJ3 1502 aaKnown RBP6.84□□□□□ -1.31
MSI2-213ENST00000581523 CEP162Q5TB80 1403 aa6.84□□□□□ -1.32
MSI2-213ENST00000581523 MROH2AA6NES4 1674 aa6.84□□□□□ -1.32
MSI2-213ENST00000581523 MTUS2Q5JR59 1369 aa6.83□□□□□ -1.32
MSI2-213ENST00000581523 ESPNB1AK53 854 aa6.83□□□□□ -1.32
MSI2-213ENST00000581523 ARID4AP29374 1257 aaPredicted RBP6.83□□□□□ -1.32
MSI2-213ENST00000581523 AGERQ15109 404 aa6.83□□□□□ -1.32
MSI2-213ENST00000581523 CCDC27Q2M243 656 aa6.83□□□□□ -1.32
MSI2-213ENST00000581523 LINC01559Q495D7 138 aa6.83□□□□□ -1.32
MSI2-213ENST00000581523 TRMT44Q8IYL2 757 aaKnown RBP6.83□□□□□ -1.32
MSI2-213ENST00000581523 SIX5Q8N196 739 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms