RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 A0A0C4DFX4 3053 aa3.64□□□□□ -1.83
CTC1-207ENST00000580299 POLR3AO14802 1390 aaPredicted RBP3.63□□□□□ -1.83
CTC1-207ENST00000580299 ITGB4P16144 1822 aa3.63□□□□□ -1.83
CTC1-207ENST00000580299 KDM6AO15550 1401 aaPredicted RBP3.63□□□□□ -1.83
CTC1-207ENST00000580299 CPSF1Q10570 1443 aaKnown RBP3.63□□□□□ -1.83
CTC1-207ENST00000580299 IQCA1LA6NCM1 817 aa3.63□□□□□ -1.83
CTC1-207ENST00000580299 KCNQ4P56696 695 aa3.63□□□□□ -1.83
CTC1-207ENST00000580299 GRM1Q13255 1194 aa3.63□□□□□ -1.83
CTC1-207ENST00000580299 DCAF5Q96JK2 942 aa3.63□□□□□ -1.83
CTC1-207ENST00000580299 CAPNS2Q96L46 248 aa3.63□□□□□ -1.83
CTC1-207ENST00000580299 GPR101Q96P66 508 aaPredicted RBP3.63□□□□□ -1.83
CTC1-207ENST00000580299 PRAM1Q96QH2 718 aa3.63□□□□□ -1.83
CTC1-207ENST00000580299 TSKSQ9UJT2 592 aa3.63□□□□□ -1.83
CTC1-207ENST00000580299 PASKQ96RG2 1323 aa3.63□□□□□ -1.83
CTC1-207ENST00000580299 ANKRD36BQ8N2N9 1353 aa3.63□□□□□ -1.83
CTC1-207ENST00000580299 FER1L6Q2WGJ9 1857 aa3.62□□□□□ -1.83
CTC1-207ENST00000580299 VPS8Q8N3P4 1428 aa3.62□□□□□ -1.83
CTC1-207ENST00000580299 ADAMTSL1Q8N6G6 1762 aa3.62□□□□□ -1.83
CTC1-207ENST00000580299 PHF14O94880 888 aa3.62□□□□□ -1.83
CTC1-207ENST00000580299 MMP10P09238 476 aa3.62□□□□□ -1.83
CTC1-207ENST00000580299 DPEP1P16444 411 aa3.62□□□□□ -1.83
CTC1-207ENST00000580299 MAP2K2P36507 400 aa3.62□□□□□ -1.83
CTC1-207ENST00000580299 TMEM132EQ6IEE7 984 aa3.62□□□□□ -1.83
CTC1-207ENST00000580299 PIK3C2GO75747 1445 aa3.61□□□□□ -1.83
CTC1-207ENST00000580299 PAPPA2Q9BXP8 1791 aa3.61□□□□□ -1.83
CTC1-207ENST00000580299 SCN11AQ9UI33 1791 aa3.61□□□□□ -1.83
CTC1-207ENST00000580299 TRIOBPQ9H2D6 2365 aa3.61□□□□□ -1.83
CTC1-207ENST00000580299 MEGF6O75095 1541 aa3.61□□□□□ -1.83
CTC1-207ENST00000580299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.61□□□□□ -1.83
CTC1-207ENST00000580299 IL2RBP14784 551 aa3.61□□□□□ -1.83
CTC1-207ENST00000580299 SSFA2P28290 1259 aa3.61□□□□□ -1.83
CTC1-207ENST00000580299 FAM122AQ96E09 287 aa3.61□□□□□ -1.83
CTC1-207ENST00000580299 RBM42Q9BTD8 480 aaKnown RBP3.61□□□□□ -1.83
CTC1-207ENST00000580299 CLEC11AQ9Y240 323 aa3.61□□□□□ -1.83
CTC1-207ENST00000580299 COL6A3P12111 3177 aa3.6□□□□□ -1.83
CTC1-207ENST00000580299 WASLO00401 505 aaPredicted RBP3.6□□□□□ -1.83
CTC1-207ENST00000580299 BRPF1P55201 1214 aaPredicted RBP3.6□□□□□ -1.83
CTC1-207ENST00000580299 RASSF7Q02833 373 aa3.6□□□□□ -1.83
CTC1-207ENST00000580299 MKRN4PQ13434 485 aaPredicted RBP3.6□□□□□ -1.83
CTC1-207ENST00000580299 EAPPQ56P03 285 aaPredicted RBP3.6□□□□□ -1.83
CTC1-207ENST00000580299 PRDM6Q9NQX0 595 aa3.6□□□□□ -1.83
CTC1-207ENST00000580299 PARP3Q9Y6F1 533 aa3.6□□□□□ -1.83
CTC1-207ENST00000580299 ADGRF5Q8IZF2 1346 aa3.6□□□□□ -1.83
CTC1-207ENST00000580299 AFDNP55196 1824 aaKnown RBP3.6□□□□□ -1.83
CTC1-207ENST00000580299 ROCK1Q13464 1354 aa3.6□□□□□ -1.83
CTC1-207ENST00000580299 ARFGEF2Q9Y6D5 1785 aa3.59□□□□□ -1.83
CTC1-207ENST00000580299 CACNA1AO00555 2505 aa3.59□□□□□ -1.83
CTC1-207ENST00000580299 POTEIP0CG38 1075 aa3.59□□□□□ -1.83
CTC1-207ENST00000580299 POTEJP0CG39 1038 aa3.59□□□□□ -1.83
CTC1-207ENST00000580299 PLA2G5P39877 138 aa3.59□□□□□ -1.83
CTC1-207ENST00000580299 PRIM1P49642 420 aaKnown RBP3.59□□□□□ -1.83
CTC1-207ENST00000580299 FAM50AQ14320 339 aaKnown RBP3.59□□□□□ -1.83
CTC1-207ENST00000580299 PKN2Q16513 984 aaKnown RBP3.59□□□□□ -1.83
CTC1-207ENST00000580299 CYP4F22Q6NT55 531 aa3.59□□□□□ -1.83
CTC1-207ENST00000580299 CTU1Q7Z7A3 348 aaKnown RBP3.59□□□□□ -1.83
CTC1-207ENST00000580299 NLGN1Q8N2Q7 840 aa3.59□□□□□ -1.83
CTC1-207ENST00000580299 KCNH5Q8NCM2 988 aa3.59□□□□□ -1.83
CTC1-207ENST00000580299 DDX54Q8TDD1 881 aaKnown RBP3.59□□□□□ -1.83
CTC1-207ENST00000580299 NUDT16Q96DE0 195 aaKnown RBP3.59□□□□□ -1.83
CTC1-207ENST00000580299 NLRP2Q9NX02 1062 aa3.59□□□□□ -1.83
CTC1-207ENST00000580299 ACEP12821 1306 aa3.59□□□□□ -1.83
CTC1-207ENST00000580299 NSD2O96028 1365 aa3.59□□□□□ -1.83
CTC1-207ENST00000580299 CEP290O15078 2479 aa3.59□□□□□ -1.84
CTC1-207ENST00000580299 MAP2P11137 1827 aaKnown RBP3.58□□□□□ -1.84
CTC1-207ENST00000580299 SPDYE2BA6NHP3 402 aa3.58□□□□□ -1.84
CTC1-207ENST00000580299 POTECB2RU33 542 aa3.58□□□□□ -1.84
CTC1-207ENST00000580299 AOC2O75106 756 aa3.58□□□□□ -1.84
CTC1-207ENST00000580299 ITGBL1O95965 494 aaPredicted RBP3.58□□□□□ -1.84
CTC1-207ENST00000580299 SPDYE6P0CI01 402 aa3.58□□□□□ -1.84
CTC1-207ENST00000580299 COL9A1P20849 921 aa3.58□□□□□ -1.84
CTC1-207ENST00000580299 NLRP6P59044 892 aa3.58□□□□□ -1.84
CTC1-207ENST00000580299 TMF1P82094 1093 aa3.58□□□□□ -1.84
CTC1-207ENST00000580299 SPDYE2Q495Y8 402 aa3.58□□□□□ -1.84
CTC1-207ENST00000580299 ERFEQ4G0M1 354 aa3.58□□□□□ -1.84
CTC1-207ENST00000580299 AKAP4Q5JQC9 854 aa3.58□□□□□ -1.84
CTC1-207ENST00000580299 ANKRD13DQ6ZTN6 518 aa3.58□□□□□ -1.84
CTC1-207ENST00000580299 PNMA8AQ86V59 439 aaPredicted RBP3.58□□□□□ -1.84
CTC1-207ENST00000580299 SMARCC1Q92922 1105 aaPredicted RBP3.58□□□□□ -1.84
CTC1-207ENST00000580299 COL25A1Q9BXS0 654 aaPredicted RBP3.58□□□□□ -1.84
CTC1-207ENST00000580299 CABP2Q9NPB3 220 aa3.58□□□□□ -1.84
CTC1-207ENST00000580299 SAGE1Q9NXZ1 904 aa3.58□□□□□ -1.84
CTC1-207ENST00000580299 HPS5Q9UPZ3 1129 aa3.58□□□□□ -1.84
CTC1-207ENST00000580299 COLQQ9Y215 455 aaPredicted RBP3.58□□□□□ -1.84
CTC1-207ENST00000580299 ERBB3P21860 1342 aa3.58□□□□□ -1.84
CTC1-207ENST00000580299 PALLDQ8WX93 1383 aa3.58□□□□□ -1.84
CTC1-207ENST00000580299 COL5A3P25940 1745 aaPredicted RBP3.58□□□□□ -1.84
CTC1-207ENST00000580299 RGPD2P0DJD1 1756 aa3.58□□□□□ -1.84
CTC1-207ENST00000580299 ADGRB1O14514 1584 aa3.57□□□□□ -1.84
CTC1-207ENST00000580299 GNPATO15228 680 aa3.57□□□□□ -1.84
CTC1-207ENST00000580299 NFAT5O94916 1531 aa3.57□□□□□ -1.84
CTC1-207ENST00000580299 KCNA3P22001 575 aa3.57□□□□□ -1.84
CTC1-207ENST00000580299 NOGQ13253 232 aa3.57□□□□□ -1.84
CTC1-207ENST00000580299 ZNF831Q5JPB2 1677 aa3.57□□□□□ -1.84
CTC1-207ENST00000580299 SZT2Q5T011 3432 aa3.57□□□□□ -1.84
CTC1-207ENST00000580299 CIAPIN1Q6FI81 312 aa3.57□□□□□ -1.84
CTC1-207ENST00000580299 SMG6Q86US8 1419 aaKnown RBP3.57□□□□□ -1.84
CTC1-207ENST00000580299 CNTROBQ8N137 903 aa3.57□□□□□ -1.84
CTC1-207ENST00000580299 SNX27Q96L92 541 aa3.57□□□□□ -1.84
CTC1-207ENST00000580299 TAF1DQ9H5J8 278 aaPredicted RBP3.57□□□□□ -1.84
CTC1-207ENST00000580299 DDX21Q9NR30 783 aaKnown RBP eCLIP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms