RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 ERVV-2B6SEH9 535 aa18.09■□□□□ 0.49
CSNK1D-209ENST00000578904 KCNQ2O43526 872 aa18.09■□□□□ 0.49
CSNK1D-209ENST00000578904 TRIM37O94972 964 aa18.09■□□□□ 0.49
CSNK1D-209ENST00000578904 PRIM1P49642 420 aaKnown RBP18.09■□□□□ 0.49
CSNK1D-209ENST00000578904 CABP4P57796 275 aa18.09■□□□□ 0.49
CSNK1D-209ENST00000578904 TMOD3Q9NYL9 352 aa18.09■□□□□ 0.49
CSNK1D-209ENST00000578904 KAT6BQ8WYB5 2073 aa18.09■□□□□ 0.49
CSNK1D-209ENST00000578904 ITGB4P16144 1822 aa18.09■□□□□ 0.49
CSNK1D-209ENST00000578904 TEFQ10587 303 aa18.08■□□□□ 0.48
CSNK1D-209ENST00000578904 IL17REQ8NFR9 667 aa18.08■□□□□ 0.48
CSNK1D-209ENST00000578904 TNS1Q9HBL0 1735 aaKnown RBP18.07■□□□□ 0.48
CSNK1D-209ENST00000578904 GNAI1P63096 354 aa18.07■□□□□ 0.48
CSNK1D-209ENST00000578904 BCL11BQ9C0K0 894 aaPredicted RBP18.07■□□□□ 0.48
CSNK1D-209ENST00000578904 SLC52A2Q9HAB3 445 aa18.07■□□□□ 0.48
CSNK1D-209ENST00000578904 CDCA7LQ96GN5 454 aa18.06■□□□□ 0.48
CSNK1D-209ENST00000578904 THUMPD2Q9BTF0 503 aaKnown RBP18.06■□□□□ 0.48
CSNK1D-209ENST00000578904 BTAF1O14981 1849 aa18.06■□□□□ 0.48
CSNK1D-209ENST00000578904 SF3B2Q13435 895 aaKnown RBP18.05■□□□□ 0.48
CSNK1D-209ENST00000578904 PTF1AQ7RTS3 328 aa18.05■□□□□ 0.48
CSNK1D-209ENST00000578904 TRMT2AQ8IZ69 625 aaKnown RBP18.05■□□□□ 0.48
CSNK1D-209ENST00000578904 PIGBQ92521 554 aa18.05■□□□□ 0.48
CSNK1D-209ENST00000578904 IFT57Q9NWB7 429 aa18.05■□□□□ 0.48
CSNK1D-209ENST00000578904 DUSP27Q5VZP5 1158 aa18.04■□□□□ 0.48
CSNK1D-209ENST00000578904 CCDC125Q86Z20 511 aa18.04■□□□□ 0.48
CSNK1D-209ENST00000578904 NFATC2IPQ8NCF5 419 aa18.04■□□□□ 0.48
CSNK1D-209ENST00000578904 SIPA1L3O60292 1781 aaPredicted RBP18.04■□□□□ 0.48
CSNK1D-209ENST00000578904 APBA3O96018 575 aa18.02■□□□□ 0.48
CSNK1D-209ENST00000578904 CT47B1P0C2W7 299 aaPredicted RBP18.02■□□□□ 0.48
CSNK1D-209ENST00000578904 CFAP44Q96MT7 982 aa18.02■□□□□ 0.48
CSNK1D-209ENST00000578904 BABAM1Q9NWV8 329 aa18.02■□□□□ 0.48
CSNK1D-209ENST00000578904 LAS1LQ9Y4W2 734 aaKnown RBP18.02■□□□□ 0.48
CSNK1D-209ENST00000578904 PAPPAQ13219 1627 aa18.01■□□□□ 0.47
CSNK1D-209ENST00000578904 TAF7Q15545 349 aaPredicted RBP18■□□□□ 0.47
CSNK1D-209ENST00000578904 PALLDQ8WX93 1383 aa18■□□□□ 0.47
CSNK1D-209ENST00000578904 BTBD11A6QL63 1104 aa17.99■□□□□ 0.47
CSNK1D-209ENST00000578904 NEFLP07196 543 aa17.99■□□□□ 0.47
CSNK1D-209ENST00000578904 SMARCC1Q92922 1105 aaPredicted RBP17.99■□□□□ 0.47
CSNK1D-209ENST00000578904 ATG3Q9NT62 314 aa17.99■□□□□ 0.47
CSNK1D-209ENST00000578904 RCAN3Q9UKA8 241 aa17.99■□□□□ 0.47
CSNK1D-209ENST00000578904 ASAP1Q9ULH1 1129 aa17.99■□□□□ 0.47
CSNK1D-209ENST00000578904 BAG6P46379 1132 aa17.98■□□□□ 0.47
CSNK1D-209ENST00000578904 SLC39A6Q13433 755 aa17.98■□□□□ 0.47
CSNK1D-209ENST00000578904 TTC5Q8N0Z6 440 aa17.98■□□□□ 0.47
CSNK1D-209ENST00000578904 FANCIQ9NVI1 1328 aa17.98■□□□□ 0.47
CSNK1D-209ENST00000578904 RGPD3A6NKT7 1758 aaPredicted RBP17.97■□□□□ 0.47
CSNK1D-209ENST00000578904 RGPD4Q7Z3J3 1758 aa17.97■□□□□ 0.47
CSNK1D-209ENST00000578904 ZNF853P0CG23 659 aa17.97■□□□□ 0.47
CSNK1D-209ENST00000578904 SPINK5Q9NQ38 1064 aaPredicted RBP17.97■□□□□ 0.47
CSNK1D-209ENST00000578904 TSPYL4Q9UJ04 414 aa17.97■□□□□ 0.47
CSNK1D-209ENST00000578904 KDM3BQ7LBC6 1761 aa17.96■□□□□ 0.47
CSNK1D-209ENST00000578904 ZNF428Q96B54 188 aa17.96■□□□□ 0.47
CSNK1D-209ENST00000578904 CHMP4AQ9BY43 222 aa17.96■□□□□ 0.47
CSNK1D-209ENST00000578904 UBR2Q8IWV8 1755 aa17.95■□□□□ 0.46
CSNK1D-209ENST00000578904 KCPQ6ZWJ8 1503 aa17.95■□□□□ 0.46
CSNK1D-209ENST00000578904 CHL1O00533 1208 aa17.95■□□□□ 0.46
CSNK1D-209ENST00000578904 ZNF790Q6PG37 636 aa17.95■□□□□ 0.46
CSNK1D-209ENST00000578904 DEFB132Q7Z7B7 95 aa17.95■□□□□ 0.46
CSNK1D-209ENST00000578904 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.95■□□□□ 0.46
CSNK1D-209ENST00000578904 MIS18AQ9NYP9 233 aa17.95■□□□□ 0.46
CSNK1D-209ENST00000578904 LY75O60449 1722 aa17.95■□□□□ 0.46
CSNK1D-209ENST00000578904 PLSCR1O15162 318 aa17.94■□□□□ 0.46
CSNK1D-209ENST00000578904 EN1Q05925 392 aaPredicted RBP17.94■□□□□ 0.46
CSNK1D-209ENST00000578904 RBM42Q9BTD8 480 aaKnown RBP17.94■□□□□ 0.46
CSNK1D-209ENST00000578904 MBIPQ9NS73 344 aa17.94■□□□□ 0.46
CSNK1D-209ENST00000578904 SUPT16HQ9Y5B9 1047 aaKnown RBP17.94■□□□□ 0.46
CSNK1D-209ENST00000578904 KCNQ3O43525 872 aa17.93■□□□□ 0.46
CSNK1D-209ENST00000578904 PTCD1O75127 700 aaKnown RBP17.93■□□□□ 0.46
CSNK1D-209ENST00000578904 TSR2Q969E8 191 aaKnown RBP17.93■□□□□ 0.46
CSNK1D-209ENST00000578904 SOS1Q07889 1333 aaPredicted RBP17.93■□□□□ 0.46
CSNK1D-209ENST00000578904 LOC102724428A0A0B4J2F2 783 aa17.92■□□□□ 0.46
CSNK1D-209ENST00000578904 SIK1P57059 783 aa17.92■□□□□ 0.46
CSNK1D-209ENST00000578904 CCNL1Q9UK58 526 aaPredicted RBP17.92■□□□□ 0.46
CSNK1D-209ENST00000578904 CACNA1FO60840 1977 aa17.91■□□□□ 0.46
CSNK1D-209ENST00000578904 EXOSC9Q06265 439 aaKnown RBP17.91■□□□□ 0.46
CSNK1D-209ENST00000578904 EZH2Q15910 746 aaKnown RBP17.91■□□□□ 0.46
CSNK1D-209ENST00000578904 TXNRD1Q16881 649 aa17.91■□□□□ 0.46
CSNK1D-209ENST00000578904 FMNL2Q96PY5 1086 aa17.91■□□□□ 0.46
CSNK1D-209ENST00000578904 CAMKK2Q96RR4 588 aa17.91■□□□□ 0.46
CSNK1D-209ENST00000578904 RREB1Q92766 1687 aa17.9■□□□□ 0.46
CSNK1D-209ENST00000578904 SLC27A3Q5K4L6 730 aa17.9■□□□□ 0.46
CSNK1D-209ENST00000578904 ZNF496Q96IT1 587 aaPredicted RBP17.9■□□□□ 0.46
CSNK1D-209ENST00000578904 HEG1Q9ULI3 1381 aa17.9■□□□□ 0.46
CSNK1D-209ENST00000578904 ATP6V1AP38606 617 aa17.89■□□□□ 0.45
CSNK1D-209ENST00000578904 ZNF831Q5JPB2 1677 aa17.89■□□□□ 0.45
CSNK1D-209ENST00000578904 CICQ96RK0 1608 aaPredicted RBP17.88■□□□□ 0.45
CSNK1D-209ENST00000578904 KCNQ4P56696 695 aa17.88■□□□□ 0.45
CSNK1D-209ENST00000578904 EIF4A1P60842 406 aaKnown RBP17.88■□□□□ 0.45
CSNK1D-209ENST00000578904 TJP1Q07157 1748 aa17.88■□□□□ 0.45
CSNK1D-209ENST00000578904 C5P01031 1676 aa17.87■□□□□ 0.45
CSNK1D-209ENST00000578904 NUP188Q5SRE5 1749 aa17.87■□□□□ 0.45
CSNK1D-209ENST00000578904 TWISTNBQ3B726 338 aaPredicted RBP17.87■□□□□ 0.45
CSNK1D-209ENST00000578904 ALDH1L2Q3SY69 923 aa17.87■□□□□ 0.45
CSNK1D-209ENST00000578904 PROM2Q8N271 834 aa17.87■□□□□ 0.45
CSNK1D-209ENST00000578904 SLC4A9Q96Q91 983 aa17.87■□□□□ 0.45
CSNK1D-209ENST00000578904 VSIG10Q8N0Z9 540 aa17.86■□□□□ 0.45
CSNK1D-209ENST00000578904 LRRC4BQ9NT99 713 aa17.86■□□□□ 0.45
CSNK1D-209ENST00000578904 LAMB4A4D0S4 1761 aa17.85■□□□□ 0.45
CSNK1D-209ENST00000578904 SNRPA1P09661 255 aaKnown RBP17.85■□□□□ 0.45
CSNK1D-209ENST00000578904 ITPK1Q13572 414 aa17.85■□□□□ 0.45
CSNK1D-209ENST00000578904 RNF123Q5XPI4 1314 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms