RNA–Protein interactions for RNA: ENST00000570688.1

ABR-208, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-208ENST00000570688 ATG3Q9NT62 314 aa14.83□□□□□ -0.04
ABR-208ENST00000570688 GNAT3A8MTJ3 354 aa14.82□□□□□ -0.04
ABR-208ENST00000570688 TMPOP42166 694 aaKnown RBP14.82□□□□□ -0.04
ABR-208ENST00000570688 WDR43Q15061 677 aaKnown RBP eCLIP14.82□□□□□ -0.04
ABR-208ENST00000570688 TXNRD1Q16881 649 aa14.82□□□□□ -0.04
ABR-208ENST00000570688 ANO8Q9HCE9 1232 aaPredicted RBP14.82□□□□□ -0.04
ABR-208ENST00000570688 UBR2Q8IWV8 1755 aa14.82□□□□□ -0.04
ABR-208ENST00000570688 KCPQ6ZWJ8 1503 aa14.82□□□□□ -0.04
ABR-208ENST00000570688 TUBGCP6Q96RT7 1819 aa14.81□□□□□ -0.04
ABR-208ENST00000570688 RUNDC1Q96C34 613 aa14.81□□□□□ -0.04
ABR-208ENST00000570688 SLC52A2Q9HAB3 445 aa14.81□□□□□ -0.04
ABR-208ENST00000570688 TRIM35Q9UPQ4 493 aa14.81□□□□□ -0.04
ABR-208ENST00000570688 KCNQ3O43525 872 aa14.8□□□□□ -0.04
ABR-208ENST00000570688 HSP90AB1P08238 724 aaKnown RBP14.8□□□□□ -0.04
ABR-208ENST00000570688 SLC39A6Q13433 755 aa14.8□□□□□ -0.04
ABR-208ENST00000570688 SF3B2Q13435 895 aaKnown RBP14.8□□□□□ -0.04
ABR-208ENST00000570688 TMOD3Q9NYL9 352 aa14.8□□□□□ -0.04
ABR-208ENST00000570688 PALLDQ8WX93 1383 aa14.8□□□□□ -0.04
ABR-208ENST00000570688 TJP1Q07157 1748 aa14.8□□□□□ -0.04
ABR-208ENST00000570688 APAF1O14727 1248 aa14.79□□□□□ -0.04
ABR-208ENST00000570688 MYH14Q7Z406 1995 aaKnown RBP14.78□□□□□ -0.04
ABR-208ENST00000570688 KDM3BQ7LBC6 1761 aa14.78□□□□□ -0.04
ABR-208ENST00000570688 CABP4P57796 275 aa14.78□□□□□ -0.04
ABR-208ENST00000570688 ITPK1Q13572 414 aa14.78□□□□□ -0.04
ABR-208ENST00000570688 COL5A3P25940 1745 aaPredicted RBP14.78□□□□□ -0.04
ABR-208ENST00000570688 C5P01031 1676 aa14.77□□□□□ -0.04
ABR-208ENST00000570688 CICQ96RK0 1608 aaPredicted RBP14.77□□□□□ -0.04
ABR-208ENST00000570688 CCER2I3L3R5 266 aa14.77□□□□□ -0.05
ABR-208ENST00000570688 RIPK4P57078 832 aa14.77□□□□□ -0.05
ABR-208ENST00000570688 ZNF827Q17R98 1081 aa14.77□□□□□ -0.05
ABR-208ENST00000570688 AMIGO3Q86WK7 504 aa14.77□□□□□ -0.05
ABR-208ENST00000570688 FAM9BQ8IZU0 186 aa14.77□□□□□ -0.05
ABR-208ENST00000570688 ZNF831Q5JPB2 1677 aa14.77□□□□□ -0.05
ABR-208ENST00000570688 MAPK8IP3Q9UPT6 1336 aa14.76□□□□□ -0.05
ABR-208ENST00000570688 NEUROD2Q15784 382 aa14.76□□□□□ -0.05
ABR-208ENST00000570688 HTATSF1O43719 755 aaKnown RBP14.75□□□□□ -0.05
ABR-208ENST00000570688 SMIM5Q71RC9 77 aa14.75□□□□□ -0.05
ABR-208ENST00000570688 PDGFDQ9GZP0 370 aaPredicted RBP14.75□□□□□ -0.05
ABR-208ENST00000570688 MIS18AQ9NYP9 233 aa14.75□□□□□ -0.05
ABR-208ENST00000570688 LOC102724428A0A0B4J2F2 783 aa14.74□□□□□ -0.05
ABR-208ENST00000570688 SIK1P57059 783 aa14.74□□□□□ -0.05
ABR-208ENST00000570688 LINC00116Q8NCU8 138 aa14.74□□□□□ -0.05
ABR-208ENST00000570688 C4BP0C0L5 1744 aa14.74□□□□□ -0.05
ABR-208ENST00000570688 PTCD1O75127 700 aaKnown RBP14.73□□□□□ -0.05
ABR-208ENST00000570688 AKT1S1Q96B36 256 aa14.73□□□□□ -0.05
ABR-208ENST00000570688 ZNF496Q96IT1 587 aaPredicted RBP14.73□□□□□ -0.05
ABR-208ENST00000570688 PNNQ9H307 717 aaKnown RBP14.73□□□□□ -0.05
ABR-208ENST00000570688 CCNL1Q9UK58 526 aaPredicted RBP14.73□□□□□ -0.05
ABR-208ENST00000570688 UBR3Q6ZT12 1888 aa14.73□□□□□ -0.05
ABR-208ENST00000570688 CASZ1Q86V15 1759 aa14.73□□□□□ -0.05
ABR-208ENST00000570688 PRAMEF22A3QJZ6 481 aa14.72□□□□□ -0.05
ABR-208ENST00000570688 PSDA5PKW4 1024 aaPredicted RBP14.72□□□□□ -0.05
ABR-208ENST00000570688 SMARCC1Q92922 1105 aaPredicted RBP14.72□□□□□ -0.05
ABR-208ENST00000570688 TEFQ10587 303 aa14.71□□□□□ -0.05
ABR-208ENST00000570688 SLC27A3Q5K4L6 730 aa14.71□□□□□ -0.05
ABR-208ENST00000570688 ZNF790Q6PG37 636 aa14.71□□□□□ -0.05
ABR-208ENST00000570688 QSER1Q2KHR3 1735 aa14.71□□□□□ -0.05
ABR-208ENST00000570688 R3HDM1Q15032 1099 aaKnown RBP14.7□□□□□ -0.06
ABR-208ENST00000570688 TAF7Q15545 349 aaPredicted RBP14.7□□□□□ -0.06
ABR-208ENST00000570688 DNAJC10Q8IXB1 793 aa14.7□□□□□ -0.06
ABR-208ENST00000570688 RTF1Q92541 710 aaKnown RBP14.7□□□□□ -0.06
ABR-208ENST00000570688 RBM42Q9BTD8 480 aaKnown RBP14.7□□□□□ -0.06
ABR-208ENST00000570688 HEG1Q9ULI3 1381 aa14.7□□□□□ -0.06
ABR-208ENST00000570688 BTBD11A6QL63 1104 aa14.69□□□□□ -0.06
ABR-208ENST00000570688 ZNF853P0CG23 659 aa14.69□□□□□ -0.06
ABR-208ENST00000570688 ATP6V1AP38606 617 aa14.69□□□□□ -0.06
ABR-208ENST00000570688 SLC15A2Q16348 729 aa14.69□□□□□ -0.06
ABR-208ENST00000570688 NEFMP07197 916 aa14.68□□□□□ -0.06
ABR-208ENST00000570688 KRT24Q2M2I5 525 aa14.68□□□□□ -0.06
ABR-208ENST00000570688 SPINK5Q9NQ38 1064 aaPredicted RBP14.68□□□□□ -0.06
ABR-208ENST00000570688 PNPLA7Q6ZV29 1317 aa14.67□□□□□ -0.06
ABR-208ENST00000570688 ZNF521Q96K83 1311 aa14.67□□□□□ -0.06
ABR-208ENST00000570688 CHL1O00533 1208 aa14.67□□□□□ -0.06
ABR-208ENST00000570688 WWC1Q8IX03 1113 aa14.67□□□□□ -0.06
ABR-208ENST00000570688 SALL2Q9Y467 1007 aaPredicted RBP14.67□□□□□ -0.06
ABR-208ENST00000570688 CYP19A1P11511 503 aaPredicted RBP14.66□□□□□ -0.06
ABR-208ENST00000570688 EIF4A1P60842 406 aaKnown RBP14.66□□□□□ -0.06
ABR-208ENST00000570688 CCDC27Q2M243 656 aa14.66□□□□□ -0.06
ABR-208ENST00000570688 INTS5Q6P9B9 1019 aaKnown RBP14.66□□□□□ -0.06
ABR-208ENST00000570688 USP16Q9Y5T5 823 aa14.65□□□□□ -0.06
ABR-208ENST00000570688 C4AP0C0L4 1744 aa14.65□□□□□ -0.06
ABR-208ENST00000570688 LAMB4A4D0S4 1761 aa14.65□□□□□ -0.06
ABR-208ENST00000570688 COL24A1Q17RW2 1714 aa14.64□□□□□ -0.07
ABR-208ENST00000570688 CRKLP46109 303 aaKnown RBP14.64□□□□□ -0.07
ABR-208ENST00000570688 LMOD3Q0VAK6 560 aa14.64□□□□□ -0.07
ABR-208ENST00000570688 MBIPQ9NS73 344 aa14.64□□□□□ -0.07
ABR-208ENST00000570688 CNTNAP4Q9C0A0 1308 aa14.64□□□□□ -0.07
ABR-208ENST00000570688 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
ABR-208ENST00000570688 COL23A1Q86Y22 540 aaPredicted RBP14.63□□□□□ -0.07
ABR-208ENST00000570688 VSIG10Q8N0Z9 540 aa14.63□□□□□ -0.07
ABR-208ENST00000570688 STK32BQ9NY57 414 aa14.63□□□□□ -0.07
ABR-208ENST00000570688 GIGYF1O75420 1035 aaPredicted RBP14.62□□□□□ -0.07
ABR-208ENST00000570688 PIP4K2AP48426 406 aaPredicted RBP14.62□□□□□ -0.07
ABR-208ENST00000570688 CFAP44Q96MT7 982 aa14.62□□□□□ -0.07
ABR-208ENST00000570688 FMNL2Q96PY5 1086 aa14.62□□□□□ -0.07
ABR-208ENST00000570688 TSPYL4Q9UJ04 414 aa14.62□□□□□ -0.07
ABR-208ENST00000570688 ZBTB1Q9Y2K1 713 aa14.62□□□□□ -0.07
ABR-208ENST00000570688 NBPF26B4DH59 902 aa14.61□□□□□ -0.07
ABR-208ENST00000570688 A1BGP04217 495 aa14.61□□□□□ -0.07
ABR-208ENST00000570688 RC3H1Q5TC82 1133 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms