RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 CABP1Q9NZU7 370 aa9.81□□□□□ -0.84
HERPUD1-217ENST00000569429 TTC21BQ7Z4L5 1316 aa9.81□□□□□ -0.84
HERPUD1-217ENST00000569429 TTC21AQ8NDW8 1320 aa9.81□□□□□ -0.84
HERPUD1-217ENST00000569429 DEFB115Q30KQ5 88 aa9.8□□□□□ -0.84
HERPUD1-217ENST00000569429 DPY19L2Q6NUT2 758 aa9.8□□□□□ -0.84
HERPUD1-217ENST00000569429 ZCRB1Q8TBF4 217 aaKnown RBP9.8□□□□□ -0.84
HERPUD1-217ENST00000569429 MPHOSPH9Q99550 1183 aa9.8□□□□□ -0.84
HERPUD1-217ENST00000569429 WDR33Q9C0J8 1336 aaKnown RBP9.8□□□□□ -0.84
HERPUD1-217ENST00000569429 SCN4AP35499 1836 aa9.79□□□□□ -0.84
HERPUD1-217ENST00000569429 RGPD2P0DJD1 1756 aa9.79□□□□□ -0.84
HERPUD1-217ENST00000569429 TMF1P82094 1093 aa9.79□□□□□ -0.84
HERPUD1-217ENST00000569429 RASSF7Q02833 373 aa9.79□□□□□ -0.84
HERPUD1-217ENST00000569429 SMARCC1Q92922 1105 aaPredicted RBP9.79□□□□□ -0.84
HERPUD1-217ENST00000569429 CABP2Q9NPB3 220 aa9.79□□□□□ -0.84
HERPUD1-217ENST00000569429 POTEIP0CG38 1075 aa9.78□□□□□ -0.84
HERPUD1-217ENST00000569429 POTEJP0CG39 1038 aa9.78□□□□□ -0.84
HERPUD1-217ENST00000569429 STAC3Q96MF2 364 aa9.78□□□□□ -0.84
HERPUD1-217ENST00000569429 ZNF692Q9BU19 519 aaPredicted RBP9.78□□□□□ -0.84
HERPUD1-217ENST00000569429 BEGAINQ9BUH8 593 aa9.78□□□□□ -0.84
HERPUD1-217ENST00000569429 SZT2Q5T011 3432 aa9.78□□□□□ -0.84
HERPUD1-217ENST00000569429 ITGBL1O95965 494 aaPredicted RBP9.77□□□□□ -0.85
HERPUD1-217ENST00000569429 LINC00116Q8NCU8 138 aa9.77□□□□□ -0.85
HERPUD1-217ENST00000569429 PARP3Q9Y6F1 533 aa9.77□□□□□ -0.85
HERPUD1-217ENST00000569429 LTBP1Q14766 1721 aa9.76□□□□□ -0.85
HERPUD1-217ENST00000569429 GNPATO15228 680 aa9.76□□□□□ -0.85
HERPUD1-217ENST00000569429 LDHDQ86WU2 507 aa9.76□□□□□ -0.85
HERPUD1-217ENST00000569429 MKI67P46013 3256 aaKnown RBP9.76□□□□□ -0.85
HERPUD1-217ENST00000569429 USP31Q70CQ4 1352 aa9.75□□□□□ -0.85
HERPUD1-217ENST00000569429 DGKZQ13574 1117 aa9.75□□□□□ -0.85
HERPUD1-217ENST00000569429 HABP4Q5JVS0 413 aaKnown RBP9.75□□□□□ -0.85
HERPUD1-217ENST00000569429 MPRIPQ6WCQ1 1025 aa9.75□□□□□ -0.85
HERPUD1-217ENST00000569429 DLEC1Q9Y238 1755 aa9.75□□□□□ -0.85
HERPUD1-217ENST00000569429 FER1L6Q2WGJ9 1857 aa9.74□□□□□ -0.85
HERPUD1-217ENST00000569429 TRPM7Q96QT4 1865 aa9.74□□□□□ -0.85
HERPUD1-217ENST00000569429 MEGF6O75095 1541 aa9.74□□□□□ -0.85
HERPUD1-217ENST00000569429 LOC102724428A0A0B4J2F2 783 aa9.74□□□□□ -0.85
HERPUD1-217ENST00000569429 DLL1O00548 723 aa9.74□□□□□ -0.85
HERPUD1-217ENST00000569429 SIK1P57059 783 aa9.74□□□□□ -0.85
HERPUD1-217ENST00000569429 TRAPPC3LQ5T215 181 aa9.74□□□□□ -0.85
HERPUD1-217ENST00000569429 KDM2AQ9Y2K7 1162 aa9.74□□□□□ -0.85
HERPUD1-217ENST00000569429 MYH14Q7Z406 1995 aaKnown RBP9.74□□□□□ -0.85
HERPUD1-217ENST00000569429 TRIOBPQ9H2D6 2365 aa9.73□□□□□ -0.85
HERPUD1-217ENST00000569429 CA12O43570 354 aa9.73□□□□□ -0.85
HERPUD1-217ENST00000569429 GYS1P13807 737 aa9.73□□□□□ -0.85
HERPUD1-217ENST00000569429 CHRNA5P30532 468 aa9.73□□□□□ -0.85
HERPUD1-217ENST00000569429 SOX10P56693 466 aa9.73□□□□□ -0.85
HERPUD1-217ENST00000569429 CGNL1Q0VF96 1302 aa9.73□□□□□ -0.85
HERPUD1-217ENST00000569429 MON2Q7Z3U7 1717 aa9.73□□□□□ -0.85
HERPUD1-217ENST00000569429 ADAMTSL1Q8N6G6 1762 aa9.73□□□□□ -0.85
HERPUD1-217ENST00000569429 CEP290O15078 2479 aa9.72□□□□□ -0.85
HERPUD1-217ENST00000569429 ADRA2BP18089 450 aa9.72□□□□□ -0.85
HERPUD1-217ENST00000569429 ECE1P42892 770 aa9.72□□□□□ -0.85
HERPUD1-217ENST00000569429 DCAF11Q8TEB1 546 aa9.72□□□□□ -0.85
HERPUD1-217ENST00000569429 IP6K1Q92551 441 aa9.72□□□□□ -0.85
HERPUD1-217ENST00000569429 TSKSQ9UJT2 592 aa9.72□□□□□ -0.85
HERPUD1-217ENST00000569429 IQCA1LA6NCM1 817 aa9.71□□□□□ -0.86
HERPUD1-217ENST00000569429 NFKBIEO00221 500 aa9.71□□□□□ -0.86
HERPUD1-217ENST00000569429 CAPNS2Q96L46 248 aa9.71□□□□□ -0.86
HERPUD1-217ENST00000569429 GPR101Q96P66 508 aaPredicted RBP9.71□□□□□ -0.86
HERPUD1-217ENST00000569429 RTCBQ9Y3I0 505 aaKnown RBP9.71□□□□□ -0.86
HERPUD1-217ENST00000569429 COL6A3P12111 3177 aa9.71□□□□□ -0.86
HERPUD1-217ENST00000569429 AFDNP55196 1824 aaKnown RBP9.7□□□□□ -0.86
HERPUD1-217ENST00000569429 MAP2K2P36507 400 aa9.7□□□□□ -0.86
HERPUD1-217ENST00000569429 ITPK1Q13572 414 aa9.7□□□□□ -0.86
HERPUD1-217ENST00000569429 NBPF15Q8N660 670 aa9.7□□□□□ -0.86
HERPUD1-217ENST00000569429 ARHGEF1Q92888 912 aaKnown RBP9.7□□□□□ -0.86
HERPUD1-217ENST00000569429 TAF1DQ9H5J8 278 aaPredicted RBP9.7□□□□□ -0.86
HERPUD1-217ENST00000569429 ZNF219Q9P2Y4 722 aaPredicted RBP9.7□□□□□ -0.86
HERPUD1-217ENST00000569429 CENPJQ9HC77 1338 aaPredicted RBP9.7□□□□□ -0.86
HERPUD1-217ENST00000569429 ADAMTS7Q9UKP4 1686 aa9.7□□□□□ -0.86
HERPUD1-217ENST00000569429 DDNO94850 711 aaPredicted RBP9.69□□□□□ -0.86
HERPUD1-217ENST00000569429 FXR1P51114 621 aaKnown RBP eCLIP9.69□□□□□ -0.86
HERPUD1-217ENST00000569429 NBPF1Q3BBV0 1214 aa9.69□□□□□ -0.86
HERPUD1-217ENST00000569429 ERFEQ4G0M1 354 aa9.69□□□□□ -0.86
HERPUD1-217ENST00000569429 ZNF831Q5JPB2 1677 aa9.69□□□□□ -0.86
HERPUD1-217ENST00000569429 PIGBQ92521 554 aa9.69□□□□□ -0.86
HERPUD1-217ENST00000569429 LTV1Q96GA3 475 aaPredicted RBP9.69□□□□□ -0.86
HERPUD1-217ENST00000569429 PCDH11XQ9BZA7 1347 aa9.69□□□□□ -0.86
HERPUD1-217ENST00000569429 PCDH11YQ9BZA8 1340 aa9.69□□□□□ -0.86
HERPUD1-217ENST00000569429 CD163L1Q9NR16 1453 aa9.69□□□□□ -0.86
HERPUD1-217ENST00000569429 ABT1Q9ULW3 272 aaKnown RBP9.69□□□□□ -0.86
HERPUD1-217ENST00000569429 COL5A3P25940 1745 aaPredicted RBP9.68□□□□□ -0.86
HERPUD1-217ENST00000569429 KTN1Q86UP2 1357 aaKnown RBP9.68□□□□□ -0.86
HERPUD1-217ENST00000569429 RFC4P35249 363 aa9.68□□□□□ -0.86
HERPUD1-217ENST00000569429 ATP6V1AP38606 617 aa9.68□□□□□ -0.86
HERPUD1-217ENST00000569429 L3MBTL3Q96JM7 780 aaPredicted RBP9.68□□□□□ -0.86
HERPUD1-217ENST00000569429 SMG6Q86US8 1419 aaKnown RBP9.67□□□□□ -0.86
HERPUD1-217ENST00000569429 DDR1Q08345 913 aa9.67□□□□□ -0.86
HERPUD1-217ENST00000569429 CNTROBQ8N137 903 aa9.67□□□□□ -0.86
HERPUD1-217ENST00000569429 TTLL6Q8N841 843 aa9.67□□□□□ -0.86
HERPUD1-217ENST00000569429 KIAA0100Q14667 2235 aaKnown RBP9.67□□□□□ -0.86
HERPUD1-217ENST00000569429 RPS6KA4O75676 772 aa9.66□□□□□ -0.86
HERPUD1-217ENST00000569429 RC3H1Q5TC82 1133 aaKnown RBP9.66□□□□□ -0.86
HERPUD1-217ENST00000569429 CYP4F22Q6NT55 531 aa9.66□□□□□ -0.86
HERPUD1-217ENST00000569429 NRXN2Q9P2S2 1712 aa9.65□□□□□ -0.86
HERPUD1-217ENST00000569429 MAP3K19Q56UN5 1328 aa9.65□□□□□ -0.86
HERPUD1-217ENST00000569429 EVC2Q86UK5 1308 aa9.65□□□□□ -0.86
HERPUD1-217ENST00000569429 AKAP11Q9UKA4 1901 aa9.65□□□□□ -0.86
HERPUD1-217ENST00000569429 NME9Q86XW9 330 aa9.65□□□□□ -0.86
HERPUD1-217ENST00000569429 RAPGEF4Q8WZA2 1011 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms