RNA–Protein interactions for RNA: ENST00000567491.1

SH3RF3-AS1-201, SH3RF3 antisense RNA 1, humanhuman

BASIC

Gene SH3RF3-AS1, Length 1,604 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-AS1-201ENST00000567491 NFATC2IPQ8NCF5 419 aa29.05■■■□□ 2.24
SH3RF3-AS1-201ENST00000567491 KDM3BQ7LBC6 1761 aa29.05■■■□□ 2.24
SH3RF3-AS1-201ENST00000567491 TMOD3Q9NYL9 352 aa29.05■■■□□ 2.24
SH3RF3-AS1-201ENST00000567491 BTAF1O14981 1849 aa29.04■■■□□ 2.24
SH3RF3-AS1-201ENST00000567491 PRIM1P49642 420 aaKnown RBP29.04■■■□□ 2.24
SH3RF3-AS1-201ENST00000567491 GOLGA2Q08379 1002 aa29.04■■■□□ 2.24
SH3RF3-AS1-201ENST00000567491 TAF7Q15545 349 aaPredicted RBP29.02■■■□□ 2.24
SH3RF3-AS1-201ENST00000567491 IL16Q14005 1332 aa29.02■■■□□ 2.24
SH3RF3-AS1-201ENST00000567491 PAPPAQ13219 1627 aa29.02■■■□□ 2.24
SH3RF3-AS1-201ENST00000567491 GNAI1P63096 354 aa29.01■■■□□ 2.23
SH3RF3-AS1-201ENST00000567491 IFT57Q9NWB7 429 aa29.01■■■□□ 2.23
SH3RF3-AS1-201ENST00000567491 KCNQ2O43526 872 aa29■■■□□ 2.23
SH3RF3-AS1-201ENST00000567491 BTBD11A6QL63 1104 aa28.99■■■□□ 2.23
SH3RF3-AS1-201ENST00000567491 CFAP44Q96MT7 982 aa28.99■■■□□ 2.23
SH3RF3-AS1-201ENST00000567491 MIS18AQ9NYP9 233 aa28.99■■■□□ 2.23
SH3RF3-AS1-201ENST00000567491 PIGBQ92521 554 aa28.98■■■□□ 2.23
SH3RF3-AS1-201ENST00000567491 CDCA7LQ96GN5 454 aa28.98■■■□□ 2.23
SH3RF3-AS1-201ENST00000567491 SPINK5Q9NQ38 1064 aaPredicted RBP28.98■■■□□ 2.23
SH3RF3-AS1-201ENST00000567491 TSPYL4Q9UJ04 414 aa28.98■■■□□ 2.23
SH3RF3-AS1-201ENST00000567491 UBR2Q8IWV8 1755 aa28.97■■■□□ 2.23
SH3RF3-AS1-201ENST00000567491 E9PSI1 815 aa28.97■■■□□ 2.23
SH3RF3-AS1-201ENST00000567491 ZNF853P0CG23 659 aa28.95■■■□□ 2.23
SH3RF3-AS1-201ENST00000567491 TSR2Q969E8 191 aaKnown RBP28.95■■■□□ 2.23
SH3RF3-AS1-201ENST00000567491 MYH16Q9H6N6 1097 aa28.95■■■□□ 2.23
SH3RF3-AS1-201ENST00000567491 MBIPQ9NS73 344 aa28.95■■■□□ 2.23
SH3RF3-AS1-201ENST00000567491 CHL1O00533 1208 aa28.94■■■□□ 2.22
SH3RF3-AS1-201ENST00000567491 SLFN5Q08AF3 891 aa28.94■■■□□ 2.22
SH3RF3-AS1-201ENST00000567491 SLC39A6Q13433 755 aa28.94■■■□□ 2.22
SH3RF3-AS1-201ENST00000567491 TNS1Q9HBL0 1735 aaKnown RBP28.94■■■□□ 2.22
SH3RF3-AS1-201ENST00000567491 TRIM37O94972 964 aa28.94■■■□□ 2.22
SH3RF3-AS1-201ENST00000567491 PTF1AQ7RTS3 328 aa28.94■■■□□ 2.22
SH3RF3-AS1-201ENST00000567491 BABAM1Q9NWV8 329 aa28.94■■■□□ 2.22
SH3RF3-AS1-201ENST00000567491 FANCIQ9NVI1 1328 aa28.93■■■□□ 2.22
SH3RF3-AS1-201ENST00000567491 TTC5Q8N0Z6 440 aa28.92■■■□□ 2.22
SH3RF3-AS1-201ENST00000567491 BCL11BQ9C0K0 894 aaPredicted RBP28.91■■■□□ 2.22
SH3RF3-AS1-201ENST00000567491 KCNQ3O43525 872 aa28.91■■■□□ 2.22
SH3RF3-AS1-201ENST00000567491 ZNF790Q6PG37 636 aa28.91■■■□□ 2.22
SH3RF3-AS1-201ENST00000567491 ASAP1Q9ULH1 1129 aa28.91■■■□□ 2.22
SH3RF3-AS1-201ENST00000567491 ATG3Q9NT62 314 aa28.89■■■□□ 2.22
SH3RF3-AS1-201ENST00000567491 KCPQ6ZWJ8 1503 aa28.88■■■□□ 2.21
SH3RF3-AS1-201ENST00000567491 LY75O60449 1722 aa28.87■■■□□ 2.21
SH3RF3-AS1-201ENST00000567491 DUSP27Q5VZP5 1158 aa28.87■■■□□ 2.21
SH3RF3-AS1-201ENST00000567491 C5P01031 1676 aa28.86■■■□□ 2.21
SH3RF3-AS1-201ENST00000567491 PALLDQ8WX93 1383 aa28.85■■■□□ 2.21
SH3RF3-AS1-201ENST00000567491 TRMT2AQ8IZ69 625 aaKnown RBP28.85■■■□□ 2.21
SH3RF3-AS1-201ENST00000567491 PTCD1O75127 700 aaKnown RBP28.84■■■□□ 2.21
SH3RF3-AS1-201ENST00000567491 SMARCC1Q92922 1105 aaPredicted RBP28.84■■■□□ 2.21
SH3RF3-AS1-201ENST00000567491 EIF4A1P60842 406 aaKnown RBP28.83■■■□□ 2.21
SH3RF3-AS1-201ENST00000567491 ZNF496Q96IT1 587 aaPredicted RBP28.83■■■□□ 2.21
SH3RF3-AS1-201ENST00000567491 FMNL2Q96PY5 1086 aa28.83■■■□□ 2.21
SH3RF3-AS1-201ENST00000567491 LAMB4A4D0S4 1761 aa28.82■■■□□ 2.2
SH3RF3-AS1-201ENST00000567491 EXOSC9Q06265 439 aaKnown RBP28.82■■■□□ 2.2
SH3RF3-AS1-201ENST00000567491 KRT24Q2M2I5 525 aa28.82■■■□□ 2.2
SH3RF3-AS1-201ENST00000567491 RBM42Q9BTD8 480 aaKnown RBP28.82■■■□□ 2.2
SH3RF3-AS1-201ENST00000567491 TJP1Q07157 1748 aa28.8■■■□□ 2.2
SH3RF3-AS1-201ENST00000567491 HEG1Q9ULI3 1381 aa28.79■■■□□ 2.2
SH3RF3-AS1-201ENST00000567491 RGPD3A6NKT7 1758 aaPredicted RBP28.79■■■□□ 2.2
SH3RF3-AS1-201ENST00000567491 RGPD4Q7Z3J3 1758 aa28.79■■■□□ 2.2
SH3RF3-AS1-201ENST00000567491 APBA3O96018 575 aa28.79■■■□□ 2.2
SH3RF3-AS1-201ENST00000567491 ZNF831Q5JPB2 1677 aa28.79■■■□□ 2.2
SH3RF3-AS1-201ENST00000567491 ELL2O00472 640 aaPredicted RBP28.78■■■□□ 2.2
SH3RF3-AS1-201ENST00000567491 C8orf58Q8NAV2 365 aa28.78■■■□□ 2.2
SH3RF3-AS1-201ENST00000567491 CICQ96RK0 1608 aaPredicted RBP28.76■■■□□ 2.19
SH3RF3-AS1-201ENST00000567491 TAF1LQ8IZX4 1826 aa28.76■■■□□ 2.19
SH3RF3-AS1-201ENST00000567491 LOC102724428A0A0B4J2F2 783 aa28.76■■■□□ 2.19
SH3RF3-AS1-201ENST00000567491 SIK1P57059 783 aa28.76■■■□□ 2.19
SH3RF3-AS1-201ENST00000567491 SF3B2Q13435 895 aaKnown RBP28.76■■■□□ 2.19
SH3RF3-AS1-201ENST00000567491 TSPYL6Q8N831 410 aa28.76■■■□□ 2.19
SH3RF3-AS1-201ENST00000567491 TWISTNBQ3B726 338 aaPredicted RBP28.75■■■□□ 2.19
SH3RF3-AS1-201ENST00000567491 COL5A3P25940 1745 aaPredicted RBP28.74■■■□□ 2.19
SH3RF3-AS1-201ENST00000567491 GIGYF1O75420 1035 aaPredicted RBP28.74■■■□□ 2.19
SH3RF3-AS1-201ENST00000567491 SNRPA1P09661 255 aaKnown RBP28.74■■■□□ 2.19
SH3RF3-AS1-201ENST00000567491 ILDR2Q71H61 639 aa28.74■■■□□ 2.19
SH3RF3-AS1-201ENST00000567491 PRAMEF22A3QJZ6 481 aa28.73■■■□□ 2.19
SH3RF3-AS1-201ENST00000567491 VSIG10Q8N0Z9 540 aa28.72■■■□□ 2.19
SH3RF3-AS1-201ENST00000567491 SLC4A9Q96Q91 983 aa28.72■■■□□ 2.19
SH3RF3-AS1-201ENST00000567491 ATP6V1AP38606 617 aa28.72■■■□□ 2.19
SH3RF3-AS1-201ENST00000567491 CCNL1Q9UK58 526 aaPredicted RBP28.71■■■□□ 2.19
SH3RF3-AS1-201ENST00000567491 HOXB7P09629 217 aa28.7■■■□□ 2.19
SH3RF3-AS1-201ENST00000567491 PLSCR1O15162 318 aa28.69■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 DNAJC10Q8IXB1 793 aa28.69■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 SOS1Q07889 1333 aaPredicted RBP28.69■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 EIF2S2P20042 333 aaKnown RBP28.69■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 KCNQ4P56696 695 aa28.69■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 NECTIN2Q92692 538 aa28.68■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 CACNA1FO60840 1977 aa28.67■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 VAMP4O75379 141 aa28.67■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 BAG6P46379 1132 aa28.67■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 HDGFL1Q5TGJ6 251 aa28.67■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 CCDC125Q86Z20 511 aa28.67■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 TEX13AQ9BXU3 409 aaPredicted RBP28.67■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 CT47B1P0C2W7 299 aaPredicted RBP28.66■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 ITPK1Q13572 414 aa28.66■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 USP16Q9Y5T5 823 aa28.66■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 RREB1Q92766 1687 aa28.65■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 EN1Q05925 392 aaPredicted RBP28.65■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 TXNRD1Q16881 649 aa28.65■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 SLC27A3Q5K4L6 730 aa28.65■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 MYH14Q7Z406 1995 aaKnown RBP28.64■■■□□ 2.18
SH3RF3-AS1-201ENST00000567491 STARD3NLO95772 234 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms